RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 C21orf2O43822 256 aa4.46□□□□□ -1.7
UBE4A-201ENST00000252108 NFASCO94856 1347 aa4.46□□□□□ -1.7
UBE4A-201ENST00000252108 FAM228BP0C875 321 aa4.46□□□□□ -1.7
UBE4A-201ENST00000252108 PON1P27169 355 aa4.46□□□□□ -1.7
UBE4A-201ENST00000252108 STX2P32856 288 aa4.46□□□□□ -1.7
UBE4A-201ENST00000252108 SATB1Q01826 763 aa4.46□□□□□ -1.7
UBE4A-201ENST00000252108 KCNA1Q09470 495 aa4.46□□□□□ -1.7
UBE4A-201ENST00000252108 SLC4A8Q2Y0W8 1093 aa4.46□□□□□ -1.7
UBE4A-201ENST00000252108 SPDYE2Q495Y8 402 aa4.46□□□□□ -1.7
UBE4A-201ENST00000252108 LACTB2Q53H82 288 aaPredicted RBP4.46□□□□□ -1.7
UBE4A-201ENST00000252108 TTMPQ5BVD1 217 aa4.46□□□□□ -1.7
UBE4A-201ENST00000252108 VSIG1Q86XK7 387 aa4.46□□□□□ -1.7
UBE4A-201ENST00000252108 LRRC47Q8N1G4 583 aaKnown RBP4.46□□□□□ -1.7
UBE4A-201ENST00000252108 RFFLQ8WZ73 363 aa4.46□□□□□ -1.7
UBE4A-201ENST00000252108 MLXIPQ9HAP2 919 aa4.46□□□□□ -1.7
UBE4A-201ENST00000252108 EURLQ9NYK6 297 aa4.46□□□□□ -1.7
UBE4A-201ENST00000252108 ZNF112Q9UJU3 913 aa4.46□□□□□ -1.7
UBE4A-201ENST00000252108 GJA3Q9Y6H8 435 aa4.46□□□□□ -1.7
UBE4A-201ENST00000252108 IGSF9BQ9UPX0 1349 aa4.46□□□□□ -1.7
UBE4A-201ENST00000252108 SPDYE2BA6NHP3 402 aa4.46□□□□□ -1.7
UBE4A-201ENST00000252108 SPDYE3A6NKU9 549 aa4.46□□□□□ -1.7
UBE4A-201ENST00000252108 E9PMD0 336 aa4.46□□□□□ -1.7
UBE4A-201ENST00000252108 RASGRF2O14827 1237 aa4.46□□□□□ -1.7
UBE4A-201ENST00000252108 LIN7AO14910 233 aaPredicted RBP4.46□□□□□ -1.7
UBE4A-201ENST00000252108 SPDYE6P0CI01 402 aa4.46□□□□□ -1.7
UBE4A-201ENST00000252108 GCKP35557 465 aa4.46□□□□□ -1.7
UBE4A-201ENST00000252108 PSMC2P35998 433 aaKnown RBP4.46□□□□□ -1.7
UBE4A-201ENST00000252108 RIPK1Q13546 671 aa4.46□□□□□ -1.7
UBE4A-201ENST00000252108 EPC2Q52LR7 807 aa4.46□□□□□ -1.7
UBE4A-201ENST00000252108 PHLDB3Q6NSJ2 640 aa4.46□□□□□ -1.7
UBE4A-201ENST00000252108 HIBCHQ6NVY1 386 aaPredicted RBP4.46□□□□□ -1.7
UBE4A-201ENST00000252108 PHLDB2Q86SQ0 1253 aa4.46□□□□□ -1.7
UBE4A-201ENST00000252108 GPBP1Q86WP2 473 aa4.46□□□□□ -1.7
UBE4A-201ENST00000252108 TRIM42Q8IWZ5 723 aa4.46□□□□□ -1.7
UBE4A-201ENST00000252108 CCDC13Q8IYE1 715 aa4.46□□□□□ -1.7
UBE4A-201ENST00000252108 SYCP3Q8IZU3 236 aa4.46□□□□□ -1.7
UBE4A-201ENST00000252108 SMCR8Q8TEV9 937 aaPredicted RBP4.46□□□□□ -1.7
UBE4A-201ENST00000252108 DDX1Q92499 740 aaKnown RBP4.46□□□□□ -1.7
UBE4A-201ENST00000252108 KLHL29Q96CT2 875 aa4.46□□□□□ -1.7
UBE4A-201ENST00000252108 SAAL1Q96ER3 474 aa4.46□□□□□ -1.7
UBE4A-201ENST00000252108 DTNBP1Q96EV8 351 aa4.46□□□□□ -1.7
UBE4A-201ENST00000252108 SH3GL3Q99963 347 aa4.46□□□□□ -1.7
UBE4A-201ENST00000252108 MKNK1Q9BUB5 465 aa4.46□□□□□ -1.7
UBE4A-201ENST00000252108 CARD9Q9H257 536 aa4.46□□□□□ -1.7
UBE4A-201ENST00000252108 SUDS3Q9H7L9 328 aaPredicted RBP4.46□□□□□ -1.7
UBE4A-201ENST00000252108 POTEB3A0JP26 581 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 POTECB2RU33 542 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 ABLIM1O14639 778 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 RGS20O76081 388 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 MMEP08473 750 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 MAPTP10636 758 aaKnown RBP4.45□□□□□ -1.7
UBE4A-201ENST00000252108 PCK1P35558 622 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 SLC1A4P43007 532 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 PMS2P54278 862 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 CYB5D1Q6P9G0 228 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 CCDC174Q6PII3 467 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 POTEBQ6S5H4 581 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 AGGF1Q8N302 714 aaeCLIP4.45□□□□□ -1.7
UBE4A-201ENST00000252108 U2AF1L4Q8WU68 220 aaKnown RBP4.45□□□□□ -1.7
UBE4A-201ENST00000252108 RPGRQ92834 1020 aaKnown RBP4.45□□□□□ -1.7
UBE4A-201ENST00000252108 RNPC3Q96LT9 517 aaKnown RBP4.45□□□□□ -1.7
UBE4A-201ENST00000252108 FAM20AQ96MK3 541 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 UIMC1Q96RL1 719 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 SENP7Q9BQF6 1050 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 REEP2Q9BRK0 252 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 IKZF4Q9H2S9 585 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 ZDHHC18Q9NUE0 388 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 DDX25Q9UHL0 483 aaKnown RBP4.45□□□□□ -1.7
UBE4A-201ENST00000252108 SLC12A6Q9UHW9 1150 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 PNMA2Q9UL42 364 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 SUFUQ9UMX1 484 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 UBIAD1Q9Y5Z9 338 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 PCNTO95613 3336 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 NPHP3-ACAD11A0A0J9YXS1 232 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 TCRBV5S1A1TA0A578 114 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 DDX3XO00571 662 aaKnown RBP eCLIP4.45□□□□□ -1.79e-12■■■■□ 23.9
UBE4A-201ENST00000252108 PPP1R12AO14974 1030 aaPredicted RBP4.45□□□□□ -1.7
UBE4A-201ENST00000252108 ATP2C2O75185 946 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 GSCP56915 257 aaPredicted RBP4.45□□□□□ -1.7
UBE4A-201ENST00000252108 ZNF280AP59817 542 aaPredicted RBP4.45□□□□□ -1.7
UBE4A-201ENST00000252108 GTF2IP78347 998 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 ARHGAP4P98171 946 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 SLC7A5Q01650 507 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 ARID5AQ03989 594 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 LIN9Q5TKA1 542 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 RINT1Q6NUQ1 792 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 TMEM179Q6ZVK1 233 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 CYFIP1Q7L576 1253 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 STMN2Q93045 179 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 TTC25Q96NG3 672 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 WNT8AQ9H1J5 351 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 EMILIN3Q9NT22 766 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 RBM12Q9NTZ6 932 aaKnown RBP4.45□□□□□ -1.7
UBE4A-201ENST00000252108 HAUS2Q9NVX0 235 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 NOCTQ9UK39 431 aaKnown RBP4.45□□□□□ -1.7
UBE4A-201ENST00000252108 ARL2BPQ9Y2Y0 163 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 USP17L15C9J2P7 530 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 USP17L13C9JLJ4 530 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 USP17L11C9JVI0 530 aa4.45□□□□□ -1.7
UBE4A-201ENST00000252108 USP17L18D6R9N7 530 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms