RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 WRAP73Q9P2S5 460 aaPredicted RBP18.35■□□□□ 0.53
FOXA1-201ENST00000250448 CNOT8Q9UFF9 292 aaKnown RBP18.35■□□□□ 0.53
FOXA1-201ENST00000250448 A0A0A6YYK5 440 aaPredicted RBP18.34■□□□□ 0.53
FOXA1-201ENST00000250448 PAEPP09466 180 aa18.34■□□□□ 0.53
FOXA1-201ENST00000250448 CNTN2Q02246 1040 aa18.34■□□□□ 0.53
FOXA1-201ENST00000250448 GHRHRQ02643 423 aa18.34■□□□□ 0.53
FOXA1-201ENST00000250448 FSTL1Q12841 308 aa18.34■□□□□ 0.53
FOXA1-201ENST00000250448 MTMR1Q13613 665 aa18.34■□□□□ 0.53
FOXA1-201ENST00000250448 ODF2Q5BJF6 829 aa18.34■□□□□ 0.53
FOXA1-201ENST00000250448 VPS36Q86VN1 386 aa18.34■□□□□ 0.53
FOXA1-201ENST00000250448 CCDC26Q8TAB7 109 aa18.34■□□□□ 0.53
FOXA1-201ENST00000250448 XRCC5P13010 732 aaKnown RBP18.34■□□□□ 0.53
FOXA1-201ENST00000250448 EPHA7Q15375 998 aa18.34■□□□□ 0.53
FOXA1-201ENST00000250448 QPCTQ16769 361 aa18.34■□□□□ 0.53
FOXA1-201ENST00000250448 DCAF17Q5H9S7 520 aaPredicted RBP18.34■□□□□ 0.53
FOXA1-201ENST00000250448 LBX2Q6XYB7 198 aa18.34■□□□□ 0.53
FOXA1-201ENST00000250448 SYCE1Q8N0S2 351 aa18.34■□□□□ 0.53
FOXA1-201ENST00000250448 BHMT2Q9H2M3 363 aa18.34■□□□□ 0.53
FOXA1-201ENST00000250448 AJAP1Q9UKB5 411 aaPredicted RBP18.34■□□□□ 0.53
FOXA1-201ENST00000250448 NOVA2Q9UNW9 492 aaKnown RBP18.34■□□□□ 0.53
FOXA1-201ENST00000250448 UBIAD1Q9Y5Z9 338 aa18.34■□□□□ 0.53
FOXA1-201ENST00000250448 TTI1O43156 1089 aa18.33■□□□□ 0.53
FOXA1-201ENST00000250448 OAZ1P54368 228 aa18.33■□□□□ 0.53
FOXA1-201ENST00000250448 SLC10A4Q96EP9 437 aa18.33■□□□□ 0.53
FOXA1-201ENST00000250448 TXNRD2Q9NNW7 524 aa18.33■□□□□ 0.53
FOXA1-201ENST00000250448 FAM114A2Q9NRY5 505 aa18.33■□□□□ 0.53
FOXA1-201ENST00000250448 KLC4Q9NSK0 619 aa18.33■□□□□ 0.53
FOXA1-201ENST00000250448 C5orf60A6NFR6 353 aa18.33■□□□□ 0.52
FOXA1-201ENST00000250448 RASSF9O75901 435 aa18.33■□□□□ 0.52
FOXA1-201ENST00000250448 SLITRK3O94933 977 aa18.33■□□□□ 0.52
FOXA1-201ENST00000250448 JAM2P57087 298 aa18.33■□□□□ 0.52
FOXA1-201ENST00000250448 MOGSQ13724 837 aa18.33■□□□□ 0.52
FOXA1-201ENST00000250448 KNOP1Q1ED39 458 aaKnown RBP18.33■□□□□ 0.52
FOXA1-201ENST00000250448 NT5DC3Q86UY8 548 aa18.33■□□□□ 0.52
FOXA1-201ENST00000250448 NCAPG2Q86XI2 1143 aa18.33■□□□□ 0.52
FOXA1-201ENST00000250448 SFR1Q86XK3 245 aa18.33■□□□□ 0.52
FOXA1-201ENST00000250448 SEC14L1Q92503 715 aa18.33■□□□□ 0.52
FOXA1-201ENST00000250448 SLC40A1Q9NP59 571 aa18.33■□□□□ 0.52
FOXA1-201ENST00000250448 SIX2Q9NPC8 291 aa18.33■□□□□ 0.52
FOXA1-201ENST00000250448 NMRK2Q9NPI5 230 aa18.33■□□□□ 0.52
FOXA1-201ENST00000250448 INTUQ9ULD6 942 aa18.33■□□□□ 0.52
FOXA1-201ENST00000250448 DNM3Q9UQ16 869 aa18.33■□□□□ 0.52
FOXA1-201ENST00000250448 SH3BP1Q9Y3L3 701 aa18.33■□□□□ 0.52
FOXA1-201ENST00000250448 RBBP6Q7Z6E9 1792 aaKnown RBP18.33■□□□□ 0.52
FOXA1-201ENST00000250448 F8VZ95 297 aa18.32■□□□□ 0.52
FOXA1-201ENST00000250448 CALUO43852 315 aaPredicted RBP18.32■□□□□ 0.52
FOXA1-201ENST00000250448 NR3C2P08235 984 aa18.32■□□□□ 0.52
FOXA1-201ENST00000250448 PPIL2Q13356 520 aa18.32■□□□□ 0.52
FOXA1-201ENST00000250448 KRT71Q3SY84 523 aa18.32■□□□□ 0.52
FOXA1-201ENST00000250448 DAAM2Q86T65 1068 aa18.32■□□□□ 0.52
FOXA1-201ENST00000250448 RAPGEF5Q92565 580 aa18.32■□□□□ 0.52
FOXA1-201ENST00000250448 HSD17B14Q9BPX1 270 aa18.32■□□□□ 0.52
FOXA1-201ENST00000250448 TEKT3Q9BXF9 490 aa18.32■□□□□ 0.52
FOXA1-201ENST00000250448 DDX3XO00571 662 aaKnown RBP eCLIP18.32■□□□□ 0.521e-7■■■■■ 27.2
FOXA1-201ENST00000250448 HOXD13P35453 343 aa18.32■□□□□ 0.52
FOXA1-201ENST00000250448 DHX9Q08211 1270 aaKnown RBP18.32■□□□□ 0.52
FOXA1-201ENST00000250448 PPP2R5CQ13362 524 aa18.32■□□□□ 0.52
FOXA1-201ENST00000250448 KCTD19Q17RG1 926 aaPredicted RBP18.32■□□□□ 0.52
FOXA1-201ENST00000250448 LDLRAD1Q5T700 205 aa18.32■□□□□ 0.52
FOXA1-201ENST00000250448 EPM2AIP1Q7L775 607 aaPredicted RBP18.32■□□□□ 0.52
FOXA1-201ENST00000250448 ANKRD35Q8N283 1001 aa18.32■□□□□ 0.52
FOXA1-201ENST00000250448 CCDC114Q96M63 670 aa18.32■□□□□ 0.52
FOXA1-201ENST00000250448 SH2D3AQ9BRG2 576 aa18.32■□□□□ 0.52
FOXA1-201ENST00000250448 CELF4Q9BZC1 486 aaKnown RBP18.32■□□□□ 0.52
FOXA1-201ENST00000250448 DPH5Q9H2P9 285 aa18.32■□□□□ 0.52
FOXA1-201ENST00000250448 AGO4Q9HCK5 861 aaKnown RBP18.32■□□□□ 0.52
FOXA1-201ENST00000250448 KCNH4Q9UQ05 1017 aa18.32■□□□□ 0.52
FOXA1-201ENST00000250448 TELO2Q9Y4R8 837 aa18.32■□□□□ 0.52
FOXA1-201ENST00000250448 GOLGA6L7A0A1B0GV03 622 aa18.32■□□□□ 0.52
FOXA1-201ENST00000250448 CXCL11O14625 94 aa18.32■□□□□ 0.52
FOXA1-201ENST00000250448 ATP2A1O14983 1001 aa18.32■□□□□ 0.52
FOXA1-201ENST00000250448 DHX15O43143 795 aaKnown RBP18.32■□□□□ 0.52
FOXA1-201ENST00000250448 NPEPPSP55786 919 aa18.32■□□□□ 0.52
FOXA1-201ENST00000250448 MAGOHP61326 146 aaKnown RBP18.32■□□□□ 0.52
FOXA1-201ENST00000250448 GIT2Q14161 759 aa18.32■□□□□ 0.52
FOXA1-201ENST00000250448 TCERG1LQ5VWI1 586 aa18.32■□□□□ 0.52
FOXA1-201ENST00000250448 GPATCH11Q8N954 259 aa18.32■□□□□ 0.52
FOXA1-201ENST00000250448 U2AF1L4Q8WU68 220 aaKnown RBP18.32■□□□□ 0.52
FOXA1-201ENST00000250448 MAGOHBQ96A72 148 aaKnown RBP18.32■□□□□ 0.52
FOXA1-201ENST00000250448 HES6Q96HZ4 224 aa18.32■□□□□ 0.52
FOXA1-201ENST00000250448 SEC16BQ96JE7 1060 aa18.32■□□□□ 0.52
FOXA1-201ENST00000250448 CD248Q9HCU0 757 aa18.32■□□□□ 0.52
FOXA1-201ENST00000250448 UTP11Q9Y3A2 253 aaKnown RBP18.32■□□□□ 0.52
FOXA1-201ENST00000250448 DCDC2CA8MYV0 355 aa18.31■□□□□ 0.52
FOXA1-201ENST00000250448 PDXKO00764 312 aa18.31■□□□□ 0.52
FOXA1-201ENST00000250448 CHUKO15111 745 aa18.31■□□□□ 0.52
FOXA1-201ENST00000250448 AKAP3O75969 853 aa18.31■□□□□ 0.52
FOXA1-201ENST00000250448 CYP2C8P10632 490 aa18.31■□□□□ 0.52
FOXA1-201ENST00000250448 MAP2K2P36507 400 aa18.31■□□□□ 0.52
FOXA1-201ENST00000250448 SP4Q02446 784 aa18.31■□□□□ 0.52
FOXA1-201ENST00000250448 OSBPL7Q9BZF2 842 aa18.31■□□□□ 0.52
FOXA1-201ENST00000250448 GCNT4Q9P109 453 aa18.31■□□□□ 0.52
FOXA1-201ENST00000250448 ASTN1O14525 1302 aa18.31■□□□□ 0.52
FOXA1-201ENST00000250448 RSPH10B2B2RC85 870 aa18.31■□□□□ 0.52
FOXA1-201ENST00000250448 RSPH10BP0C881 870 aa18.31■□□□□ 0.52
FOXA1-201ENST00000250448 Q3C1V9 767 aa18.31■□□□□ 0.52
FOXA1-201ENST00000250448 CACNA2D3Q8IZS8 1091 aa18.31■□□□□ 0.52
FOXA1-201ENST00000250448 JPH2Q9BR39 696 aaPredicted RBP18.31■□□□□ 0.52
FOXA1-201ENST00000250448 REEP2Q9BRK0 252 aa18.31■□□□□ 0.52
FOXA1-201ENST00000250448 RUSC1Q9BVN2 902 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms