RNA–Protein interactions for RNA: ENST00000223129.8

RPA3-201, Transcript of replication protein A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA3, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-201ENST00000223129 LAMA2P24043 3122 aaKnown RBP16.46■□□□□ 0.23
RPA3-201ENST00000223129 TISP43B9A030 160 aa16.46■□□□□ 0.23
RPA3-201ENST00000223129 BAIAP3O94812 1187 aa16.46■□□□□ 0.23
RPA3-201ENST00000223129 NELFCDQ8IXH7 590 aa16.46■□□□□ 0.23
RPA3-201ENST00000223129 ZNF507Q8TCN5 953 aa16.46■□□□□ 0.23
RPA3-201ENST00000223129 ACCSQ96QU6 501 aa16.46■□□□□ 0.23
RPA3-201ENST00000223129 C9IYK1 514 aa16.45■□□□□ 0.22
RPA3-201ENST00000223129 ANKRD63C9JTQ0 380 aa16.45■□□□□ 0.22
RPA3-201ENST00000223129 BMP8BP34820 402 aa16.45■□□□□ 0.22
RPA3-201ENST00000223129 SLC24A5Q71RS6 500 aa16.45■□□□□ 0.22
RPA3-201ENST00000223129 MYOCDQ8IZQ8 938 aa16.45■□□□□ 0.22
RPA3-201ENST00000223129 RNPC3Q96LT9 517 aaKnown RBP16.45■□□□□ 0.22
RPA3-201ENST00000223129 RMND1Q9NWS8 449 aa16.45■□□□□ 0.22
RPA3-201ENST00000223129 TMEM63CQ9P1W3 806 aa16.45■□□□□ 0.22
RPA3-201ENST00000223129 HNRNPDLO14979 420 aaKnown RBP16.45■□□□□ 0.22
RPA3-201ENST00000223129 UPP2O95045 317 aa16.45■□□□□ 0.22
RPA3-201ENST00000223129 NPTXRO95502 500 aa16.45■□□□□ 0.22
RPA3-201ENST00000223129 SCP2P22307 547 aa16.45■□□□□ 0.22
RPA3-201ENST00000223129 ABCD1P33897 745 aa16.45■□□□□ 0.22
RPA3-201ENST00000223129 LIG4P49917 911 aa16.45■□□□□ 0.22
RPA3-201ENST00000223129 ALCAMQ13740 583 aa16.45■□□□□ 0.22
RPA3-201ENST00000223129 SLC39A4Q6P5W5 647 aa16.45■□□□□ 0.22
RPA3-201ENST00000223129 STXBP4Q6ZWJ1 553 aa16.45■□□□□ 0.22
RPA3-201ENST00000223129 ZBTB33Q86T24 672 aa16.45■□□□□ 0.22
RPA3-201ENST00000223129 SYCP3Q8IZU3 236 aa16.45■□□□□ 0.22
RPA3-201ENST00000223129 HVCN1Q96D96 273 aa16.45■□□□□ 0.22
RPA3-201ENST00000223129 TCHPQ9BT92 498 aa16.45■□□□□ 0.22
RPA3-201ENST00000223129 HAPLN2Q9GZV7 340 aa16.45■□□□□ 0.22
RPA3-201ENST00000223129 PTPRHQ9HD43 1115 aa16.45■□□□□ 0.22
RPA3-201ENST00000223129 FAM105AQ9NUU6 356 aa16.45■□□□□ 0.22
RPA3-201ENST00000223129 TNFSF13BQ9Y275 285 aa16.45■□□□□ 0.22
RPA3-201ENST00000223129 N4BP3O15049 544 aa16.44■□□□□ 0.22
RPA3-201ENST00000223129 EIF3DO15371 548 aaKnown RBP eCLIP16.44■□□□□ 0.22
RPA3-201ENST00000223129 EFCAB14O75071 495 aa16.44■□□□□ 0.22
RPA3-201ENST00000223129 BMP6P22004 513 aa16.44■□□□□ 0.22
RPA3-201ENST00000223129 KCNJ6P48051 423 aa16.44■□□□□ 0.22
RPA3-201ENST00000223129 ZNF658Q5TYW1 1059 aaPredicted RBP16.44■□□□□ 0.22
RPA3-201ENST00000223129 RASIP1Q5U651 963 aa16.44■□□□□ 0.22
RPA3-201ENST00000223129 FAM117BQ6P1L5 589 aa16.44■□□□□ 0.22
RPA3-201ENST00000223129 SLC27A1Q6PCB7 646 aa16.44■□□□□ 0.22
RPA3-201ENST00000223129 ZPBP2Q6X784 338 aa16.44■□□□□ 0.22
RPA3-201ENST00000223129 PRO3102Q9H379 93 aa16.44■□□□□ 0.22
RPA3-201ENST00000223129 ANKFY1Q9P2R3 1169 aa16.44■□□□□ 0.22
RPA3-201ENST00000223129 HES2Q9Y543 173 aa16.44■□□□□ 0.22
RPA3-201ENST00000223129 PCDHB2Q9Y5E7 798 aa16.44■□□□□ 0.22
RPA3-201ENST00000223129 SLC4A7Q9Y6M7 1214 aa16.44■□□□□ 0.22
RPA3-201ENST00000223129 LAMA3Q16787 3333 aa16.44■□□□□ 0.22
RPA3-201ENST00000223129 A0A0U1RQF3 1178 aa16.43■□□□□ 0.22
RPA3-201ENST00000223129 ABLIM1O14639 778 aa16.43■□□□□ 0.22
RPA3-201ENST00000223129 PIGRP01833 764 aa16.43■□□□□ 0.22
RPA3-201ENST00000223129 HARSP12081 509 aaKnown RBP16.43■□□□□ 0.22
RPA3-201ENST00000223129 PTMSP20962 102 aa16.43■□□□□ 0.22
RPA3-201ENST00000223129 PROZP22891 400 aa16.43■□□□□ 0.22
RPA3-201ENST00000223129 FAM189BP81408 668 aa16.43■□□□□ 0.22
RPA3-201ENST00000223129 CAVIN1Q6NZI2 390 aaKnown RBP16.43■□□□□ 0.22
RPA3-201ENST00000223129 ECHDC2Q86YB7 292 aa16.43■□□□□ 0.22
RPA3-201ENST00000223129 RNF169Q8NCN4 708 aa16.43■□□□□ 0.22
RPA3-201ENST00000223129 TMEM206Q9H813 350 aa16.43■□□□□ 0.22
RPA3-201ENST00000223129 C1orf112Q9NSG2 853 aa16.43■□□□□ 0.22
RPA3-201ENST00000223129 EXOC7Q9UPT5 735 aa16.43■□□□□ 0.22
RPA3-201ENST00000223129 PTPRSQ13332 1948 aa16.43■□□□□ 0.22
RPA3-201ENST00000223129 ZMYM2Q9UBW7 1377 aa16.43■□□□□ 0.22
RPA3-201ENST00000223129 TTC3P53804 2025 aa16.43■□□□□ 0.22
RPA3-201ENST00000223129 MEIS3P2A8K0S8 358 aa16.43■□□□□ 0.22
RPA3-201ENST00000223129 TOM1L1O75674 476 aa16.43■□□□□ 0.22
RPA3-201ENST00000223129 AMHP03971 560 aa16.43■□□□□ 0.22
RPA3-201ENST00000223129 MATR3P43243 847 aaKnown RBP eCLIP16.43■□□□□ 0.22
RPA3-201ENST00000223129 MORC3Q14149 939 aa16.43■□□□□ 0.22
RPA3-201ENST00000223129 KLHL40Q2TBA0 621 aa16.43■□□□□ 0.22
RPA3-201ENST00000223129 ZNF568Q3ZCX4 644 aa16.43■□□□□ 0.22
RPA3-201ENST00000223129 SMG8Q8ND04 991 aaKnown RBP16.43■□□□□ 0.22
RPA3-201ENST00000223129 LPPQ93052 612 aa16.43■□□□□ 0.22
RPA3-201ENST00000223129 CCDC51Q96ER9 411 aa16.43■□□□□ 0.22
RPA3-201ENST00000223129 ADPGKQ9BRR6 497 aa16.43■□□□□ 0.22
RPA3-201ENST00000223129 TRAIPQ9BWF2 469 aa16.43■□□□□ 0.22
RPA3-201ENST00000223129 TRIM6Q9C030 488 aaPredicted RBP16.43■□□□□ 0.22
RPA3-201ENST00000223129 CDT1Q9H211 546 aa16.43■□□□□ 0.22
RPA3-201ENST00000223129 MTIF3Q9H2K0 278 aaKnown RBP16.43■□□□□ 0.22
RPA3-201ENST00000223129 RNF39Q9H2S5 420 aa16.43■□□□□ 0.22
RPA3-201ENST00000223129 IPPQ9Y573 584 aa16.43■□□□□ 0.22
RPA3-201ENST00000223129 CLDN3O15551 220 aa16.42■□□□□ 0.22
RPA3-201ENST00000223129 ATF7P17544 494 aaPredicted RBP16.42■□□□□ 0.22
RPA3-201ENST00000223129 PRCPP42785 496 aa16.42■□□□□ 0.22
RPA3-201ENST00000223129 BMT2Q1RMZ1 405 aa16.42■□□□□ 0.22
RPA3-201ENST00000223129 SEZ6Q53EL9 994 aa16.42■□□□□ 0.22
RPA3-201ENST00000223129 CCDC183Q5T5S1 534 aa16.42■□□□□ 0.22
RPA3-201ENST00000223129 FAM109BQ6ICB4 259 aaPredicted RBP16.42■□□□□ 0.22
RPA3-201ENST00000223129 MPZL3Q6UWV2 235 aa16.42■□□□□ 0.22
RPA3-201ENST00000223129 TDHQ8IZJ6 230 aa16.42■□□□□ 0.22
RPA3-201ENST00000223129 CRIPAKQ8N1N5 446 aa16.42■□□□□ 0.22
RPA3-201ENST00000223129 CEP120Q8N960 986 aa16.42■□□□□ 0.22
RPA3-201ENST00000223129 TOP1MTQ969P6 601 aa16.42■□□□□ 0.22
RPA3-201ENST00000223129 APOL6Q9BWW8 343 aa16.42■□□□□ 0.22
RPA3-201ENST00000223129 NXF3Q9H4D5 531 aaKnown RBP16.42■□□□□ 0.22
RPA3-201ENST00000223129 COLQQ9Y215 455 aaPredicted RBP16.42■□□□□ 0.22
RPA3-201ENST00000223129 PCDHB7Q9Y5E2 793 aa16.42■□□□□ 0.22
RPA3-201ENST00000223129 GRXCR1A8MXD5 290 aa16.41■□□□□ 0.22
RPA3-201ENST00000223129 TGFB1I1O43294 461 aa16.41■□□□□ 0.22
RPA3-201ENST00000223129 ADSSP30520 456 aa16.41■□□□□ 0.22
RPA3-201ENST00000223129 KNOP1Q1ED39 458 aaKnown RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms