RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 KCND2Q9NZV8 630 aa18.62■□□□□ 0.57
USB1-201ENST00000219281 SYNGAP1Q96PV0 1343 aa18.62■□□□□ 0.57
USB1-201ENST00000219281 CTNND1O60716 968 aaKnown RBP18.61■□□□□ 0.57
USB1-201ENST00000219281 RASSF9O75901 435 aa18.61■□□□□ 0.57
USB1-201ENST00000219281 CHN1P15882 459 aa18.61■□□□□ 0.57
USB1-201ENST00000219281 RFX1P22670 979 aa18.61■□□□□ 0.57
USB1-201ENST00000219281 DRG2P55039 364 aaKnown RBP18.61■□□□□ 0.57
USB1-201ENST00000219281 HADHBP55084 474 aaKnown RBP18.61■□□□□ 0.57
USB1-201ENST00000219281 GPC5P78333 572 aa18.61■□□□□ 0.57
USB1-201ENST00000219281 PPP3CAQ08209 521 aa18.61■□□□□ 0.57
USB1-201ENST00000219281 SLC29A2Q14542 456 aa18.61■□□□□ 0.57
USB1-201ENST00000219281 MESDQ14696 234 aa18.61■□□□□ 0.57
USB1-201ENST00000219281 UBAP2Q5T6F2 1119 aaKnown RBP18.61■□□□□ 0.57
USB1-201ENST00000219281 ZDHHC14Q8IZN3 488 aa18.61■□□□□ 0.57
USB1-201ENST00000219281 CHMP6Q96FZ7 201 aa18.61■□□□□ 0.57
USB1-201ENST00000219281 AZI2Q9H6S1 392 aa18.61■□□□□ 0.57
USB1-201ENST00000219281 SMCHD1A6NHR9 2005 aa18.61■□□□□ 0.57
USB1-201ENST00000219281 MIF4GDA9UHW6 222 aaKnown RBP18.61■□□□□ 0.57
USB1-201ENST00000219281 DDX39AO00148 427 aaKnown RBP18.61■□□□□ 0.57
USB1-201ENST00000219281 ATP2C2O75185 946 aa18.61■□□□□ 0.57
USB1-201ENST00000219281 COMTP21964 271 aa18.61■□□□□ 0.57
USB1-201ENST00000219281 CHRNA3P32297 505 aa18.61■□□□□ 0.57
USB1-201ENST00000219281 RPL21P46778 160 aaKnown RBP18.61■□□□□ 0.57
USB1-201ENST00000219281 GCLMP48507 274 aa18.61■□□□□ 0.57
USB1-201ENST00000219281 TTC27Q6P3X3 843 aa18.61■□□□□ 0.57
USB1-201ENST00000219281 SAMD1Q6SPF0 538 aaPredicted RBP18.61■□□□□ 0.57
USB1-201ENST00000219281 UHMK1Q8TAS1 419 aaKnown RBP18.61■□□□□ 0.57
USB1-201ENST00000219281 ZSWIM1Q9BR11 485 aa18.61■□□□□ 0.57
USB1-201ENST00000219281 FAM129AQ9BZQ8 928 aa18.61■□□□□ 0.57
USB1-201ENST00000219281 SEMA4AQ9H3S1 761 aa18.61■□□□□ 0.57
USB1-201ENST00000219281 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.61■□□□□ 0.573e-9■■■■■ 81.5
USB1-201ENST00000219281 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.61■□□□□ 0.57
USB1-201ENST00000219281 TMOD2Q9NZR1 351 aa18.61■□□□□ 0.57
USB1-201ENST00000219281 RPTORQ8N122 1335 aa18.61■□□□□ 0.57
USB1-201ENST00000219281 MUTP22033 750 aa18.6■□□□□ 0.57
USB1-201ENST00000219281 VAMP7P51809 220 aa18.6■□□□□ 0.57
USB1-201ENST00000219281 SPDYE2Q495Y8 402 aa18.6■□□□□ 0.57
USB1-201ENST00000219281 OGFOD1Q8N543 542 aa18.6■□□□□ 0.57
USB1-201ENST00000219281 CENPTQ96BT3 561 aa18.6■□□□□ 0.57
USB1-201ENST00000219281 WDR11Q9BZH6 1224 aa18.6■□□□□ 0.57
USB1-201ENST00000219281 PSME4Q14997 1843 aa18.6■□□□□ 0.57
USB1-201ENST00000219281 CCDC169A6NNP5 214 aa18.6■□□□□ 0.57
USB1-201ENST00000219281 TULP1O00294 542 aaPredicted RBP18.6■□□□□ 0.57
USB1-201ENST00000219281 ATMINO43313 823 aaPredicted RBP18.6■□□□□ 0.57
USB1-201ENST00000219281 CTNNA2P26232 953 aa18.6■□□□□ 0.57
USB1-201ENST00000219281 IFI35P80217 286 aaPredicted RBP18.6■□□□□ 0.57
USB1-201ENST00000219281 CCDC137Q6PK04 289 aaKnown RBP18.6■□□□□ 0.57
USB1-201ENST00000219281 INTS8Q75QN2 995 aaKnown RBP18.6■□□□□ 0.57
USB1-201ENST00000219281 KAT5Q92993 513 aa18.6■□□□□ 0.57
USB1-201ENST00000219281 PGM2Q96G03 612 aa18.6■□□□□ 0.57
USB1-201ENST00000219281 PCDHB18PQ96TA0 734 aa18.6■□□□□ 0.57
USB1-201ENST00000219281 TEKT3Q9BXF9 490 aa18.6■□□□□ 0.57
USB1-201ENST00000219281 TMEM39BQ9GZU3 492 aa18.6■□□□□ 0.57
USB1-201ENST00000219281 CD248Q9HCU0 757 aa18.6■□□□□ 0.57
USB1-201ENST00000219281 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.6■□□□□ 0.57
USB1-201ENST00000219281 RGS16O15492 202 aaPredicted RBP18.59■□□□□ 0.57
USB1-201ENST00000219281 SGPL1O95470 568 aa18.59■□□□□ 0.57
USB1-201ENST00000219281 MMEP08473 750 aa18.59■□□□□ 0.57
USB1-201ENST00000219281 HSPA6P17066 643 aa18.59■□□□□ 0.57
USB1-201ENST00000219281 CETN1Q12798 172 aa18.59■□□□□ 0.57
USB1-201ENST00000219281 SEL1L2Q5TEA6 688 aa18.59■□□□□ 0.57
USB1-201ENST00000219281 PADI6Q6TGC4 694 aa18.59■□□□□ 0.57
USB1-201ENST00000219281 CBWD1Q9BRT8 395 aa18.59■□□□□ 0.57
USB1-201ENST00000219281 YY1AP1Q9H869 796 aa18.59■□□□□ 0.57
USB1-201ENST00000219281 PKD2L1Q9P0L9 805 aa18.59■□□□□ 0.57
USB1-201ENST00000219281 PCYOX1Q9UHG3 505 aa18.59■□□□□ 0.57
USB1-201ENST00000219281 PFASO15067 1338 aa18.59■□□□□ 0.57
USB1-201ENST00000219281 TCRBV7S2A1N4TA0A589 114 aa18.58■□□□□ 0.57
USB1-201ENST00000219281 RTN2O75298 545 aa18.58■□□□□ 0.57
USB1-201ENST00000219281 PYGMP11217 842 aa18.58■□□□□ 0.57
USB1-201ENST00000219281 MMP13P45452 471 aa18.58■□□□□ 0.57
USB1-201ENST00000219281 SCTRP47872 440 aa18.58■□□□□ 0.57
USB1-201ENST00000219281 PEX5P50542 639 aa18.58■□□□□ 0.57
USB1-201ENST00000219281 CPNE8Q86YQ8 564 aa18.58■□□□□ 0.57
USB1-201ENST00000219281 ZSWIM2Q8NEG5 633 aa18.58■□□□□ 0.57
USB1-201ENST00000219281 ADAM7Q9H2U9 754 aa18.58■□□□□ 0.57
USB1-201ENST00000219281 ZNRF3Q9ULT6 936 aa18.58■□□□□ 0.57
USB1-201ENST00000219281 TMX2Q9Y320 296 aa18.58■□□□□ 0.57
USB1-201ENST00000219281 IPO5O00410 1097 aaKnown RBP18.58■□□□□ 0.56
USB1-201ENST00000219281 PODXLO00592 558 aa18.58■□□□□ 0.56
USB1-201ENST00000219281 FGFR4P22455 802 aa18.58■□□□□ 0.56
USB1-201ENST00000219281 BAG6P46379 1132 aa18.58■□□□□ 0.56
USB1-201ENST00000219281 CXCL9Q07325 125 aa18.58■□□□□ 0.56
USB1-201ENST00000219281 SF3A3Q12874 501 aaKnown RBP eCLIP18.58■□□□□ 0.56
USB1-201ENST00000219281 TRAF1Q13077 416 aa18.58■□□□□ 0.56
USB1-201ENST00000219281 MYBPC2Q14324 1141 aa18.58■□□□□ 0.56
USB1-201ENST00000219281 EPC2Q52LR7 807 aa18.58■□□□□ 0.56
USB1-201ENST00000219281 MIGA2Q7L4E1 593 aa18.58■□□□□ 0.56
USB1-201ENST00000219281 BTBD6Q96KE9 485 aa18.58■□□□□ 0.56
USB1-201ENST00000219281 RPS6KC1Q96S38 1066 aa18.58■□□□□ 0.56
USB1-201ENST00000219281 EHMT1Q9H9B1 1298 aa18.58■□□□□ 0.56
USB1-201ENST00000219281 VEZTQ9HBM0 779 aa18.58■□□□□ 0.56
USB1-201ENST00000219281 HAUS2Q9NVX0 235 aa18.58■□□□□ 0.56
USB1-201ENST00000219281 MTRF1LQ9UGC7 380 aaKnown RBP18.58■□□□□ 0.56
USB1-201ENST00000219281 CHRNB2P17787 502 aa18.57■□□□□ 0.56
USB1-201ENST00000219281 TCEAL1Q15170 157 aa18.57■□□□□ 0.56
USB1-201ENST00000219281 LACTB2Q53H82 288 aaPredicted RBP18.57■□□□□ 0.56
USB1-201ENST00000219281 C1orf220Q5T0J3 134 aa18.57■□□□□ 0.56
USB1-201ENST00000219281 B3GNT9Q6UX72 402 aa18.57■□□□□ 0.56
USB1-201ENST00000219281 CCDC91Q7Z6B0 441 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms