RNA–Protein interactions for RNA: ENST00000216877.10

PTPRA-201, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-201ENST00000216877 SEC63Q9UGP8 760 aaKnown RBP15.66■□□□□ 0.1
PTPRA-201ENST00000216877 DOLKQ9UPQ8 538 aa15.66■□□□□ 0.1
PTPRA-201ENST00000216877 FOXN2P32314 431 aa15.66■□□□□ 0.1
PTPRA-201ENST00000216877 ACAP1Q15027 740 aa15.66■□□□□ 0.1
PTPRA-201ENST00000216877 RNF43Q68DV7 783 aa15.66■□□□□ 0.1
PTPRA-201ENST00000216877 CCDC137Q6PK04 289 aaKnown RBP15.66■□□□□ 0.1
PTPRA-201ENST00000216877 SESTD1Q86VW0 696 aa15.66■□□□□ 0.1
PTPRA-201ENST00000216877 C9orf72Q96LT7 481 aa15.66■□□□□ 0.1
PTPRA-201ENST00000216877 PWWP2AQ96N64 755 aa15.66■□□□□ 0.1
PTPRA-201ENST00000216877 RUNDC3BQ96NL0 473 aa15.66■□□□□ 0.1
PTPRA-201ENST00000216877 CATSPER2Q96P56 530 aa15.66■□□□□ 0.1
PTPRA-201ENST00000216877 POP1Q99575 1024 aaKnown RBP15.66■□□□□ 0.1
PTPRA-201ENST00000216877 CDC42EP4Q9H3Q1 356 aaKnown RBP15.66■□□□□ 0.1
PTPRA-201ENST00000216877 SPATA7Q9P0W8 599 aa15.66■□□□□ 0.1
PTPRA-201ENST00000216877 SH3GLB1Q9Y371 365 aa15.66■□□□□ 0.1
PTPRA-201ENST00000216877 COL4A3BPQ9Y5P4 624 aa15.66■□□□□ 0.1
PTPRA-201ENST00000216877 PRPF3O43395 683 aaKnown RBP15.65■□□□□ 0.1
PTPRA-201ENST00000216877 PDE5AO76074 875 aa15.65■□□□□ 0.1
PTPRA-201ENST00000216877 PGM1P36871 562 aa15.65■□□□□ 0.1
PTPRA-201ENST00000216877 NLRP9Q7RTR0 991 aa15.65■□□□□ 0.1
PTPRA-201ENST00000216877 PHLDB2Q86SQ0 1253 aa15.65■□□□□ 0.1
PTPRA-201ENST00000216877 LCORLQ8N3X6 602 aa15.65■□□□□ 0.1
PTPRA-201ENST00000216877 LZTS2Q9BRK4 669 aa15.65■□□□□ 0.1
PTPRA-201ENST00000216877 EPB41L4BQ9H329 900 aa15.65■□□□□ 0.1
PTPRA-201ENST00000216877 VAT1LQ9HCJ6 419 aa15.65■□□□□ 0.1
PTPRA-201ENST00000216877 NAGPAQ9UK23 515 aa15.65■□□□□ 0.1
PTPRA-201ENST00000216877 RPTORQ8N122 1335 aa15.65■□□□□ 0.1
PTPRA-201ENST00000216877 ADCY3O60266 1144 aa15.65■□□□□ 0.1
PTPRA-201ENST00000216877 NMT2O60551 498 aa15.65■□□□□ 0.1
PTPRA-201ENST00000216877 CIB2O75838 187 aa15.65■□□□□ 0.1
PTPRA-201ENST00000216877 SLC9A1P19634 815 aa15.65■□□□□ 0.1
PTPRA-201ENST00000216877 MAPK7Q13164 816 aa15.65■□□□□ 0.1
PTPRA-201ENST00000216877 LSAMPQ13449 338 aa15.65■□□□□ 0.1
PTPRA-201ENST00000216877 CYLC2Q14093 348 aaPredicted RBP15.65■□□□□ 0.1
PTPRA-201ENST00000216877 DUPD1Q68J44 220 aa15.65■□□□□ 0.1
PTPRA-201ENST00000216877 VSTM1Q6UX27 236 aa15.65■□□□□ 0.1
PTPRA-201ENST00000216877 CCDC77Q9BR77 488 aa15.65■□□□□ 0.1
PTPRA-201ENST00000216877 DHX36Q9H2U1 1008 aaKnown RBP15.65■□□□□ 0.1
PTPRA-201ENST00000216877 UNC45AQ9H3U1 944 aa15.65■□□□□ 0.1
PTPRA-201ENST00000216877 NDE1Q9NXR1 346 aa15.65■□□□□ 0.1
PTPRA-201ENST00000216877 PHLPP1O60346 1717 aa15.65■□□□□ 0.1
PTPRA-201ENST00000216877 KIAA0391O15091 583 aaKnown RBP15.65■□□□□ 0.1
PTPRA-201ENST00000216877 EXOC3O60645 756 aa15.65■□□□□ 0.1
PTPRA-201ENST00000216877 HAUS5O94927 633 aa15.65■□□□□ 0.1
PTPRA-201ENST00000216877 ASLP04424 464 aa15.65■□□□□ 0.1
PTPRA-201ENST00000216877 ZNF24P17028 368 aa15.65■□□□□ 0.1
PTPRA-201ENST00000216877 KLRC3Q07444 240 aa15.65■□□□□ 0.1
PTPRA-201ENST00000216877 ZNF554Q86TJ5 538 aa15.65■□□□□ 0.1
PTPRA-201ENST00000216877 ZBTB8BQ8NAP8 495 aaPredicted RBP15.65■□□□□ 0.1
PTPRA-201ENST00000216877 RAB3IL1Q8TBN0 382 aa15.65■□□□□ 0.1
PTPRA-201ENST00000216877 SYNCQ9H7C4 482 aa15.65■□□□□ 0.1
PTPRA-201ENST00000216877 BTBD7Q9P203 1132 aa15.65■□□□□ 0.1
PTPRA-201ENST00000216877 TRAF3IP3Q9Y228 551 aa15.65■□□□□ 0.1
PTPRA-201ENST00000216877 ARHGAP42A6NI28 874 aa15.64■□□□□ 0.09
PTPRA-201ENST00000216877 G3V3G9 751 aa15.64■□□□□ 0.09
PTPRA-201ENST00000216877 E2F6O75461 281 aa15.64■□□□□ 0.09
PTPRA-201ENST00000216877 SKIV2L2P42285 1042 aaKnown RBP15.64■□□□□ 0.09
PTPRA-201ENST00000216877 DSG1Q02413 1049 aa15.64■□□□□ 0.09
PTPRA-201ENST00000216877 DCAF8Q5TAQ9 597 aa15.64■□□□□ 0.09
PTPRA-201ENST00000216877 PPP1R21Q6ZMI0 780 aa15.64■□□□□ 0.09
PTPRA-201ENST00000216877 PRUNE1Q86TP1 453 aa15.64■□□□□ 0.09
PTPRA-201ENST00000216877 KBTBD2Q8IY47 623 aa15.64■□□□□ 0.09
PTPRA-201ENST00000216877 SH3TC2Q8TF17 1288 aa15.64■□□□□ 0.09
PTPRA-201ENST00000216877 SLC7A6OSQ96CW6 309 aaPredicted RBP15.64■□□□□ 0.09
PTPRA-201ENST00000216877 HSPBAP1Q96EW2 488 aa15.64■□□□□ 0.09
PTPRA-201ENST00000216877 TCHPQ9BT92 498 aa15.64■□□□□ 0.09
PTPRA-201ENST00000216877 KBTBD4Q9NVX7 518 aa15.64■□□□□ 0.09
PTPRA-201ENST00000216877 ANGPTL2Q9UKU9 493 aa15.64■□□□□ 0.09
PTPRA-201ENST00000216877 OAS1P00973 400 aaKnown RBP15.64■□□□□ 0.09
PTPRA-201ENST00000216877 TAC1P20366 129 aa15.64■□□□□ 0.09
PTPRA-201ENST00000216877 CTTNQ14247 550 aaKnown RBP15.64■□□□□ 0.09
PTPRA-201ENST00000216877 DCAF5Q96JK2 942 aa15.64■□□□□ 0.09
PTPRA-201ENST00000216877 MAGEB18Q96M61 343 aa15.64■□□□□ 0.09
PTPRA-201ENST00000216877 BRD8Q9H0E9 1235 aa15.64■□□□□ 0.09
PTPRA-201ENST00000216877 DDX3XO00571 662 aaKnown RBP eCLIP15.64■□□□□ 0.096e-26■■■■■ 54.6
PTPRA-201ENST00000216877 CCDC22O60826 627 aa15.64■□□□□ 0.09
PTPRA-201ENST00000216877 TRPA1O75762 1119 aa15.64■□□□□ 0.09
PTPRA-201ENST00000216877 ZFXP17010 805 aaPredicted RBP15.64■□□□□ 0.09
PTPRA-201ENST00000216877 MED21Q13503 144 aa15.64■□□□□ 0.09
PTPRA-201ENST00000216877 DNAJC10Q8IXB1 793 aa15.64■□□□□ 0.09
PTPRA-201ENST00000216877 ENAHQ8N8S7 591 aaPredicted RBP15.64■□□□□ 0.09
PTPRA-201ENST00000216877 ANKLE1Q8NAG6 615 aa15.64■□□□□ 0.09
PTPRA-201ENST00000216877 CADM1Q9BY67 442 aaKnown RBP15.64■□□□□ 0.09
PTPRA-201ENST00000216877 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.64■□□□□ 0.092e-6■■■■■ 71
PTPRA-201ENST00000216877 PARP2Q9UGN5 583 aa15.64■□□□□ 0.09
PTPRA-201ENST00000216877 TSC22D4Q9Y3Q8 395 aa15.64■□□□□ 0.09
PTPRA-201ENST00000216877 RTL9Q8NET4 1388 aa15.63■□□□□ 0.09
PTPRA-201ENST00000216877 A0A0J9YVX5 310 aa15.63■□□□□ 0.09
PTPRA-201ENST00000216877 ZBED4O75132 1171 aa15.63■□□□□ 0.09
PTPRA-201ENST00000216877 GALCP54803 685 aa15.63■□□□□ 0.09
PTPRA-201ENST00000216877 WDR72Q3MJ13 1102 aa15.63■□□□□ 0.09
PTPRA-201ENST00000216877 KLC3Q6P597 504 aa15.63■□□□□ 0.09
PTPRA-201ENST00000216877 GJB7Q6PEY0 223 aa15.63■□□□□ 0.09
PTPRA-201ENST00000216877 NCCRP1Q6ZVX7 275 aaPredicted RBP15.63■□□□□ 0.09
PTPRA-201ENST00000216877 GLYCTKQ8IVS8 523 aa15.63■□□□□ 0.09
PTPRA-201ENST00000216877 SRBD1Q8N5C6 995 aaKnown RBP15.63■□□□□ 0.09
PTPRA-201ENST00000216877 INPP5DQ92835 1189 aa15.63■□□□□ 0.09
PTPRA-201ENST00000216877 GRAMD1AQ96CP6 724 aa15.63■□□□□ 0.09
PTPRA-201ENST00000216877 R3HDM2Q9Y2K5 976 aaKnown RBP15.63■□□□□ 0.09
PTPRA-201ENST00000216877 RAD21O60216 631 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms