RNA–Protein interactions for RNA: ENST00000170564.6

GPATCH1-201, Transcript of G-patch domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPATCH1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH1-201ENST00000170564 ANKEF1Q9NU02 776 aa12.24□□□□□ -0.45
GPATCH1-201ENST00000170564 CAPN6Q9Y6Q1 641 aa12.24□□□□□ -0.45
GPATCH1-201ENST00000170564 SIP14410 1827 aa12.24□□□□□ -0.45
GPATCH1-201ENST00000170564 STAM2O75886 525 aa12.24□□□□□ -0.45
GPATCH1-201ENST00000170564 NF2P35240 595 aa12.24□□□□□ -0.45
GPATCH1-201ENST00000170564 POLR2FP61218 127 aaKnown RBP12.24□□□□□ -0.45
GPATCH1-201ENST00000170564 E2F5Q15329 346 aa12.24□□□□□ -0.45
GPATCH1-201ENST00000170564 LY6KQ17RY6 165 aa12.24□□□□□ -0.45
GPATCH1-201ENST00000170564 SLC39A4Q6P5W5 647 aa12.24□□□□□ -0.45
GPATCH1-201ENST00000170564 GJB7Q6PEY0 223 aa12.24□□□□□ -0.45
GPATCH1-201ENST00000170564 TAS1R3Q7RTX0 852 aa12.24□□□□□ -0.45
GPATCH1-201ENST00000170564 RDM1Q8NG50 284 aa12.24□□□□□ -0.45
GPATCH1-201ENST00000170564 RNPC3Q96LT9 517 aaKnown RBP12.24□□□□□ -0.45
GPATCH1-201ENST00000170564 EPB41L5Q9HCM4 733 aa12.24□□□□□ -0.45
GPATCH1-201ENST00000170564 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.24□□□□□ -0.45
GPATCH1-201ENST00000170564 MAFBQ9Y5Q3 323 aaPredicted RBP12.24□□□□□ -0.45
GPATCH1-201ENST00000170564 PLXNA1Q9UIW2 1896 aa12.24□□□□□ -0.45
GPATCH1-201ENST00000170564 UBE4BO95155 1302 aa12.23□□□□□ -0.45
GPATCH1-201ENST00000170564 ZC3H4Q9UPT8 1303 aaKnown RBP12.23□□□□□ -0.45
GPATCH1-201ENST00000170564 IGKV6D-21A0A0A0MT36 114 aa12.23□□□□□ -0.45
GPATCH1-201ENST00000170564 GSTTP1A0A1W2PQM5 241 aa12.23□□□□□ -0.45
GPATCH1-201ENST00000170564 NPTX2P47972 431 aa12.23□□□□□ -0.45
GPATCH1-201ENST00000170564 MKRN3Q13064 507 aaKnown RBP12.23□□□□□ -0.45
GPATCH1-201ENST00000170564 FAM102BQ5T8I3 360 aa12.23□□□□□ -0.45
GPATCH1-201ENST00000170564 HAUS6Q7Z4H7 955 aa12.23□□□□□ -0.45
GPATCH1-201ENST00000170564 ALS2CR12Q96Q35 445 aa12.23□□□□□ -0.45
GPATCH1-201ENST00000170564 ZNF408Q9H9D4 720 aa12.23□□□□□ -0.45
GPATCH1-201ENST00000170564 SUPT20HL2P0C7V6 817 aa12.23□□□□□ -0.45
GPATCH1-201ENST00000170564 TRIM49P0CI25 452 aa12.23□□□□□ -0.45
GPATCH1-201ENST00000170564 TRIM49CP0CI26 452 aa12.23□□□□□ -0.45
GPATCH1-201ENST00000170564 XRCC5P13010 732 aaKnown RBP12.23□□□□□ -0.45
GPATCH1-201ENST00000170564 EPHB4P54760 987 aa12.23□□□□□ -0.45
GPATCH1-201ENST00000170564 OLIG1Q8TAK6 271 aa12.23□□□□□ -0.45
GPATCH1-201ENST00000170564 AENQ8WTP8 325 aaKnown RBP12.23□□□□□ -0.45
GPATCH1-201ENST00000170564 MAF1Q9H063 256 aa12.23□□□□□ -0.45
GPATCH1-201ENST00000170564 PCIF1Q9H4Z3 704 aa12.23□□□□□ -0.45
GPATCH1-201ENST00000170564 CEP72Q9P209 647 aa12.23□□□□□ -0.45
GPATCH1-201ENST00000170564 PLXNB2O15031 1838 aa12.23□□□□□ -0.45
GPATCH1-201ENST00000170564 GOLGA6L10A6NI86 522 aa12.23□□□□□ -0.45
GPATCH1-201ENST00000170564 ANKRD63C9JTQ0 380 aa12.23□□□□□ -0.45
GPATCH1-201ENST00000170564 AFPP02771 609 aaKnown RBP12.23□□□□□ -0.45
GPATCH1-201ENST00000170564 EIF4A3P38919 411 aaKnown RBP12.23□□□□□ -0.45
GPATCH1-201ENST00000170564 ARID5AQ03989 594 aa12.23□□□□□ -0.45
GPATCH1-201ENST00000170564 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.23□□□□□ -0.45
GPATCH1-201ENST00000170564 KLHL7Q8IXQ5 586 aa12.23□□□□□ -0.45
GPATCH1-201ENST00000170564 FAM186BQ8IYM0 893 aa12.23□□□□□ -0.45
GPATCH1-201ENST00000170564 CEP170P1Q96L14 293 aa12.23□□□□□ -0.45
GPATCH1-201ENST00000170564 ST6GALNAC4Q9H4F1 302 aa12.23□□□□□ -0.45
GPATCH1-201ENST00000170564 STIM2Q9P246 746 aa12.23□□□□□ -0.45
GPATCH1-201ENST00000170564 LARSQ9P2J5 1176 aaKnown RBP12.23□□□□□ -0.45
GPATCH1-201ENST00000170564 SALL4Q9UJQ4 1053 aa12.23□□□□□ -0.45
GPATCH1-201ENST00000170564 SNX12Q9UMY4 172 aa12.23□□□□□ -0.45
GPATCH1-201ENST00000170564 USP20Q9Y2K6 914 aa12.23□□□□□ -0.45
GPATCH1-201ENST00000170564 MEFVO15553 781 aaPredicted RBP12.22□□□□□ -0.45
GPATCH1-201ENST00000170564 SHOX2O60902 331 aaPredicted RBP12.22□□□□□ -0.45
GPATCH1-201ENST00000170564 LCA5LO95447 670 aa12.22□□□□□ -0.45
GPATCH1-201ENST00000170564 MAGEA1P43355 309 aa12.22□□□□□ -0.45
GPATCH1-201ENST00000170564 CARSP49589 748 aaKnown RBP12.22□□□□□ -0.45
GPATCH1-201ENST00000170564 CEP85LQ5SZL2 805 aa12.22□□□□□ -0.45
GPATCH1-201ENST00000170564 SWT1Q5T5J6 900 aaKnown RBP12.22□□□□□ -0.45
GPATCH1-201ENST00000170564 CCDC121Q6ZUS5 278 aa12.22□□□□□ -0.45
GPATCH1-201ENST00000170564 SLC9A9Q8IVB4 645 aa12.22□□□□□ -0.45
GPATCH1-201ENST00000170564 RDH13Q8NBN7 331 aa12.22□□□□□ -0.45
GPATCH1-201ENST00000170564 TMEM174Q8WUU8 243 aa12.22□□□□□ -0.45
GPATCH1-201ENST00000170564 CYP26B1Q9NR63 512 aa12.22□□□□□ -0.45
GPATCH1-201ENST00000170564 FBXO40Q9UH90 709 aa12.22□□□□□ -0.45
GPATCH1-201ENST00000170564 GRIN2DO15399 1336 aa12.22□□□□□ -0.45
GPATCH1-201ENST00000170564 FAM170AA1A519 330 aa12.22□□□□□ -0.45
GPATCH1-201ENST00000170564 PSAPP07602 524 aa12.22□□□□□ -0.45
GPATCH1-201ENST00000170564 GNPTABQ3T906 1256 aa12.22□□□□□ -0.45
GPATCH1-201ENST00000170564 KLHDC7AQ5VTJ3 777 aa12.22□□□□□ -0.45
GPATCH1-201ENST00000170564 TRIM58Q8NG06 486 aa12.22□□□□□ -0.45
GPATCH1-201ENST00000170564 N4BP2L2Q92802 583 aaPredicted RBP12.22□□□□□ -0.45
GPATCH1-201ENST00000170564 OSBPL9Q96SU4 736 aa12.22□□□□□ -0.45
GPATCH1-201ENST00000170564 CEP83Q9Y592 693 aa12.22□□□□□ -0.45
GPATCH1-201ENST00000170564 FAM153BP0C7A2 387 aa12.21□□□□□ -0.45
GPATCH1-201ENST00000170564 MAPTP10636 758 aaKnown RBP12.21□□□□□ -0.45
GPATCH1-201ENST00000170564 UCHL3P15374 230 aa12.21□□□□□ -0.45
GPATCH1-201ENST00000170564 PSMC2P35998 433 aaKnown RBP12.21□□□□□ -0.45
GPATCH1-201ENST00000170564 FAM153CQ494X1 144 aa12.21□□□□□ -0.45
GPATCH1-201ENST00000170564 ARMC9Q7Z3E5 817 aa12.21□□□□□ -0.45
GPATCH1-201ENST00000170564 KIRREL3Q8IZU9 778 aa12.21□□□□□ -0.45
GPATCH1-201ENST00000170564 LMO3Q8TAP4 145 aa12.21□□□□□ -0.45
GPATCH1-201ENST00000170564 CDHR1Q96JP9 859 aa12.21□□□□□ -0.45
GPATCH1-201ENST00000170564 RBM12Q9NTZ6 932 aaKnown RBP12.21□□□□□ -0.45
GPATCH1-201ENST00000170564 SEPT9Q9UHD8 586 aaPredicted RBP12.21□□□□□ -0.45
GPATCH1-201ENST00000170564 FAM153AQ9UHL3 310 aa12.21□□□□□ -0.45
GPATCH1-201ENST00000170564 RBAK-RBAKDNI3L0D1 243 aa12.21□□□□□ -0.45
GPATCH1-201ENST00000170564 HEXIM1O94992 359 aaKnown RBP12.21□□□□□ -0.45
GPATCH1-201ENST00000170564 EDN1P05305 212 aa12.21□□□□□ -0.45
GPATCH1-201ENST00000170564 EPB41P11171 864 aaKnown RBP12.21□□□□□ -0.45
GPATCH1-201ENST00000170564 NR1D1P20393 614 aa12.21□□□□□ -0.45
GPATCH1-201ENST00000170564 SCP2P22307 547 aa12.21□□□□□ -0.45
GPATCH1-201ENST00000170564 RPL13P26373 211 aaKnown RBP12.21□□□□□ -0.45
GPATCH1-201ENST00000170564 LSP1P33241 339 aa12.21□□□□□ -0.45
GPATCH1-201ENST00000170564 ERVK-9P63128 1117 aa12.21□□□□□ -0.45
GPATCH1-201ENST00000170564 GFPT1Q06210 699 aaPredicted RBP12.21□□□□□ -0.45
GPATCH1-201ENST00000170564 HSDL1Q3SXM5 330 aa12.21□□□□□ -0.45
GPATCH1-201ENST00000170564 CACNA2D4Q7Z3S7 1137 aa12.21□□□□□ -0.45
GPATCH1-201ENST00000170564 IRF2BP2Q7Z5L9 587 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms