RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 JPH2Q9BR39 696 aaPredicted RBP15.54■□□□□ 0.08
RTFDC1-201ENST00000023939 RRAGCQ9HB90 399 aa15.54■□□□□ 0.08
RTFDC1-201ENST00000023939 INTUQ9ULD6 942 aa15.54■□□□□ 0.08
RTFDC1-201ENST00000023939 ZBTB42B2RXF5 422 aa15.53■□□□□ 0.08
RTFDC1-201ENST00000023939 K7ERI5 159 aa15.53■□□□□ 0.08
RTFDC1-201ENST00000023939 ADCY3O60266 1144 aa15.53■□□□□ 0.08
RTFDC1-201ENST00000023939 EVI5O60447 810 aa15.53■□□□□ 0.08
RTFDC1-201ENST00000023939 LIG4P49917 911 aa15.53■□□□□ 0.08
RTFDC1-201ENST00000023939 EFNA5P52803 228 aa15.53■□□□□ 0.08
RTFDC1-201ENST00000023939 LAMC2Q13753 1193 aa15.53■□□□□ 0.08
RTFDC1-201ENST00000023939 KIF22Q14807 665 aa15.53■□□□□ 0.08
RTFDC1-201ENST00000023939 PLCB4Q15147 1175 aa15.53■□□□□ 0.08
RTFDC1-201ENST00000023939 FAM110CQ1W6H9 321 aa15.53■□□□□ 0.08
RTFDC1-201ENST00000023939 TAPT1Q6NXT6 567 aa15.53■□□□□ 0.08
RTFDC1-201ENST00000023939 SLC30A5Q8TAD4 765 aa15.53■□□□□ 0.08
RTFDC1-201ENST00000023939 OLIG1Q8TAK6 271 aa15.53■□□□□ 0.08
RTFDC1-201ENST00000023939 RABGGTAQ92696 567 aa15.53■□□□□ 0.08
RTFDC1-201ENST00000023939 NOX5Q96PH1 765 aa15.53■□□□□ 0.08
RTFDC1-201ENST00000023939 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.53■□□□□ 0.08
RTFDC1-201ENST00000023939 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.53■□□□□ 0.08
RTFDC1-201ENST00000023939 NAGPAQ9UK23 515 aa15.53■□□□□ 0.08
RTFDC1-201ENST00000023939 SAR1BQ9Y6B6 198 aa15.53■□□□□ 0.08
RTFDC1-201ENST00000023939 V9GYY5 206 aaPredicted RBP15.53■□□□□ 0.08
RTFDC1-201ENST00000023939 ZNF233A6NK53 670 aa15.52■□□□□ 0.08
RTFDC1-201ENST00000023939 LRRIQ3A6PVS8 624 aaPredicted RBP15.52■□□□□ 0.08
RTFDC1-201ENST00000023939 ATP1A1P05023 1023 aaKnown RBP15.52■□□□□ 0.08
RTFDC1-201ENST00000023939 GPC3P51654 580 aa15.52■□□□□ 0.08
RTFDC1-201ENST00000023939 ARHGAP1Q07960 439 aa15.52■□□□□ 0.08
RTFDC1-201ENST00000023939 CAPSQ13938 189 aa15.52■□□□□ 0.08
RTFDC1-201ENST00000023939 GRB14Q14449 540 aa15.52■□□□□ 0.08
RTFDC1-201ENST00000023939 MXD4Q14582 209 aaPredicted RBP15.52■□□□□ 0.08
RTFDC1-201ENST00000023939 CDCA2Q69YH5 1023 aaPredicted RBP15.52■□□□□ 0.08
RTFDC1-201ENST00000023939 ZPBP2Q6X784 338 aa15.52■□□□□ 0.08
RTFDC1-201ENST00000023939 GPIHBP1Q8IV16 184 aa15.52■□□□□ 0.08
RTFDC1-201ENST00000023939 PSPC1Q8WXF1 523 aaKnown RBP15.52■□□□□ 0.08
RTFDC1-201ENST00000023939 GOLGA1Q92805 767 aa15.52■□□□□ 0.08
RTFDC1-201ENST00000023939 BICD1Q96G01 975 aa15.52■□□□□ 0.08
RTFDC1-201ENST00000023939 KATNBL1Q9H079 304 aa15.52■□□□□ 0.08
RTFDC1-201ENST00000023939 PDGFCQ9NRA1 345 aa15.52■□□□□ 0.08
RTFDC1-201ENST00000023939 CAPN6Q9Y6Q1 641 aa15.52■□□□□ 0.08
RTFDC1-201ENST00000023939 IVNS1ABPQ9Y6Y0 642 aa15.52■□□□□ 0.08
RTFDC1-201ENST00000023939 UTRNP46939 3433 aa15.52■□□□□ 0.08
RTFDC1-201ENST00000023939 PLXNB2O15031 1838 aa15.52■□□□□ 0.07
RTFDC1-201ENST00000023939 LRRIQ4A6NIV6 560 aa15.51■□□□□ 0.07
RTFDC1-201ENST00000023939 HBP1O60381 514 aa15.51■□□□□ 0.07
RTFDC1-201ENST00000023939 LDHAP00338 332 aaKnown RBP15.51■□□□□ 0.07
RTFDC1-201ENST00000023939 CHMP4BP1P59074 171 aa15.51■□□□□ 0.07
RTFDC1-201ENST00000023939 PSMD6Q15008 389 aa15.51■□□□□ 0.07
RTFDC1-201ENST00000023939 KIAA0753Q2KHM9 967 aa15.51■□□□□ 0.07
RTFDC1-201ENST00000023939 ALKBH5Q6P6C2 394 aaKnown RBP15.51■□□□□ 0.07
RTFDC1-201ENST00000023939 PDCL2Q8N4E4 241 aa15.51■□□□□ 0.07
RTFDC1-201ENST00000023939 GPR161Q8N6U8 529 aaKnown RBP15.51■□□□□ 0.07
RTFDC1-201ENST00000023939 PTPN18Q99952 460 aa15.51■□□□□ 0.07
RTFDC1-201ENST00000023939 SALL4Q9UJQ4 1053 aa15.51■□□□□ 0.07
RTFDC1-201ENST00000023939 A0A0B4J269 797 aa15.51■□□□□ 0.07
RTFDC1-201ENST00000023939 DDX3XO00571 662 aaKnown RBP eCLIP15.51■□□□□ 0.072e-12■■■■□ 19.9
RTFDC1-201ENST00000023939 ZC3H11AO75152 810 aaKnown RBP eCLIP15.51■□□□□ 0.07
RTFDC1-201ENST00000023939 MOCS3O95396 460 aa15.51■□□□□ 0.07
RTFDC1-201ENST00000023939 GH1P01241 217 aa15.51■□□□□ 0.07
RTFDC1-201ENST00000023939 H2AFXP16104 143 aaPredicted RBP15.51■□□□□ 0.07
RTFDC1-201ENST00000023939 MAPK4P31152 587 aa15.51■□□□□ 0.07
RTFDC1-201ENST00000023939 MKRN4PQ13434 485 aaPredicted RBP15.51■□□□□ 0.07
RTFDC1-201ENST00000023939 C15orf39Q6ZRI6 1047 aa15.51■□□□□ 0.07
RTFDC1-201ENST00000023939 GPR142Q7Z601 462 aa15.51■□□□□ 0.07
RTFDC1-201ENST00000023939 PRPF31Q8WWY3 499 aaKnown RBP15.51■□□□□ 0.07
RTFDC1-201ENST00000023939 COPS5Q92905 334 aa15.51■□□□□ 0.07
RTFDC1-201ENST00000023939 CCDC127Q96BQ5 260 aa15.51■□□□□ 0.07
RTFDC1-201ENST00000023939 CCDC113Q9H0I3 377 aa15.51■□□□□ 0.07
RTFDC1-201ENST00000023939 ZCCHC17Q9NP64 241 aaKnown RBP15.51■□□□□ 0.07
RTFDC1-201ENST00000023939 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.51■□□□□ 0.07
RTFDC1-201ENST00000023939 TSKSQ9UJT2 592 aa15.51■□□□□ 0.07
RTFDC1-201ENST00000023939 AGO2Q9UKV8 859 aaKnown RBP15.51■□□□□ 0.07
RTFDC1-201ENST00000023939 PCDHGC5Q9Y5F6 944 aa15.51■□□□□ 0.07
RTFDC1-201ENST00000023939 ADGRA2Q96PE1 1338 aa15.51■□□□□ 0.07
RTFDC1-201ENST00000023939 PLXNA1Q9UIW2 1896 aa15.5■□□□□ 0.07
RTFDC1-201ENST00000023939 A0A0A6YYK5 440 aaPredicted RBP15.5■□□□□ 0.07
RTFDC1-201ENST00000023939 DCAF8L1A6NGE4 600 aa15.5■□□□□ 0.07
RTFDC1-201ENST00000023939 FOXN3O00409 490 aaPredicted RBP15.5■□□□□ 0.07
RTFDC1-201ENST00000023939 ENC1O14682 589 aa15.5■□□□□ 0.07
RTFDC1-201ENST00000023939 KLRC1P26715 233 aa15.5■□□□□ 0.07
RTFDC1-201ENST00000023939 ENOX2Q16206 610 aaKnown RBP15.5■□□□□ 0.07
RTFDC1-201ENST00000023939 TRIM50Q86XT4 487 aa15.5■□□□□ 0.07
RTFDC1-201ENST00000023939 ARHGEF19Q8IW93 802 aa15.5■□□□□ 0.07
RTFDC1-201ENST00000023939 MSL3Q8N5Y2 521 aaKnown RBP15.5■□□□□ 0.07
RTFDC1-201ENST00000023939 FBXL13Q8NEE6 735 aa15.5■□□□□ 0.07
RTFDC1-201ENST00000023939 PPTC7Q8NI37 304 aa15.5■□□□□ 0.07
RTFDC1-201ENST00000023939 RPGRIP1Q96KN7 1286 aa15.5■□□□□ 0.07
RTFDC1-201ENST00000023939 FAM81BQ96LP2 452 aa15.5■□□□□ 0.07
RTFDC1-201ENST00000023939 FAM213AQ9BRX8 229 aa15.5■□□□□ 0.07
RTFDC1-201ENST00000023939 UBE2TQ9NPD8 197 aaPredicted RBP15.5■□□□□ 0.07
RTFDC1-201ENST00000023939 ERAP1Q9NZ08 941 aa15.5■□□□□ 0.07
RTFDC1-201ENST00000023939 SNX12Q9UMY4 172 aa15.5■□□□□ 0.07
RTFDC1-201ENST00000023939 MCM3APO60318 1980 aa15.5■□□□□ 0.07
RTFDC1-201ENST00000023939 ZNF236Q9UL36 1845 aa15.5■□□□□ 0.07
RTFDC1-201ENST00000023939 CTAGE15A4D2H0 777 aa15.49■□□□□ 0.07
RTFDC1-201ENST00000023939 SLC15A5A6NIM6 579 aa15.49■□□□□ 0.07
RTFDC1-201ENST00000023939 CTAGE8P0CG41 777 aa15.49■□□□□ 0.07
RTFDC1-201ENST00000023939 MAP2K1Q02750 393 aaPredicted RBP15.49■□□□□ 0.07
RTFDC1-201ENST00000023939 CKAP4Q07065 602 aaKnown RBP15.49■□□□□ 0.07
RTFDC1-201ENST00000023939 MKRN3Q13064 507 aaKnown RBP15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms