RNA–Protein interactions for RNA: ENSMUST00000135636.5

Sort1-203, Transcript of Sortilin, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Sort1, Length 6,836 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sort1-203ENSMUST00000135636 Rc3h1Q4VGL6 1130 aaKnown RBP19.6■□□□□ 0.73
Sort1-203ENSMUST00000135636 F13a1Q8BH61 732 aa19.6■□□□□ 0.73
Sort1-203ENSMUST00000135636 Znf496Q5SXI5 585 aa19.6■□□□□ 0.73
Sort1-203ENSMUST00000135636 Kiaa0391Q8JZY4 584 aaKnown RBP19.6■□□□□ 0.73
Sort1-203ENSMUST00000135636 CpzQ8R4V4 654 aa19.6■□□□□ 0.73
Sort1-203ENSMUST00000135636 Ccdc92Q8VDN4 314 aa19.6■□□□□ 0.73
Sort1-203ENSMUST00000135636 Sh2d4aQ9D7V1 421 aa19.6■□□□□ 0.73
Sort1-203ENSMUST00000135636 Ulk4Q3V129 1303 aa19.6■□□□□ 0.73
Sort1-203ENSMUST00000135636 Gm3252E9PUT9 216 aa19.59■□□□□ 0.73
Sort1-203ENSMUST00000135636 Gm2956E9PVJ0 216 aa19.59■□□□□ 0.73
Sort1-203ENSMUST00000135636 Gm3002E9PW72 216 aa19.59■□□□□ 0.73
Sort1-203ENSMUST00000135636 Gm3468E9QAJ8 216 aa19.59■□□□□ 0.73
Sort1-203ENSMUST00000135636 Gm8108K7N734 216 aa19.59■□□□□ 0.73
Sort1-203ENSMUST00000135636 Gm3739L7N296 216 aa19.59■□□□□ 0.73
Sort1-203ENSMUST00000135636 Gm3164L7N2B9 238 aa19.59■□□□□ 0.73
Sort1-203ENSMUST00000135636 Gm3488M0QW81 238 aa19.59■□□□□ 0.73
Sort1-203ENSMUST00000135636 Cyp3a25O09158 503 aa19.59■□□□□ 0.73
Sort1-203ENSMUST00000135636 Zswim7Q9CWQ2 152 aa19.59■□□□□ 0.73
Sort1-203ENSMUST00000135636 Rnf6Q9DBU5 667 aa19.59■□□□□ 0.73
Sort1-203ENSMUST00000135636 Vamp7P70280 220 aa19.59■□□□□ 0.73
Sort1-203ENSMUST00000135636 SyncQ9EPM5 470 aa19.59■□□□□ 0.73
Sort1-203ENSMUST00000135636 Scube2Q9JJS0 997 aa19.59■□□□□ 0.73
Sort1-203ENSMUST00000135636 Trim5E9PV98 497 aa19.59■□□□□ 0.73
Sort1-203ENSMUST00000135636 Gm10354K7N6A0 256 aa19.59■□□□□ 0.73
Sort1-203ENSMUST00000135636 Ndst4Q9EQW8 872 aa19.59■□□□□ 0.73
Sort1-203ENSMUST00000135636 Arhgap23Q69ZH9 1483 aa19.59■□□□□ 0.73
Sort1-203ENSMUST00000135636 Gucy2fQ5SDA5 1108 aa19.59■□□□□ 0.73
Sort1-203ENSMUST00000135636 Fam180aQ8BR21 173 aa19.59■□□□□ 0.73
Sort1-203ENSMUST00000135636 1700013H16RikQ9DAC5 291 aa19.59■□□□□ 0.73
Sort1-203ENSMUST00000135636 Akap5D3YVF0 745 aa19.59■□□□□ 0.73
Sort1-203ENSMUST00000135636 Arhgap6O54834 987 aa19.59■□□□□ 0.73
Sort1-203ENSMUST00000135636 Kcna4Q61423 654 aa19.59■□□□□ 0.73
Sort1-203ENSMUST00000135636 Tcp10cE9Q046 482 aa19.59■□□□□ 0.73
Sort1-203ENSMUST00000135636 Patl1Q3TC46 770 aaKnown RBP19.59■□□□□ 0.73
Sort1-203ENSMUST00000135636 Gpn3Q9D3W4 284 aa19.59■□□□□ 0.73
Sort1-203ENSMUST00000135636 Gm45261A0A1B0GSP6 197 aa19.58■□□□□ 0.73
Sort1-203ENSMUST00000135636 Speer4eK7N6S8 255 aa19.58■□□□□ 0.73
Sort1-203ENSMUST00000135636 Usp28Q5I043 1051 aa19.58■□□□□ 0.73
Sort1-203ENSMUST00000135636 Ccdc50Q810U5 305 aaKnown RBP19.58■□□□□ 0.73
Sort1-203ENSMUST00000135636 Cadm1Q8R5M8 456 aaKnown RBP19.58■□□□□ 0.73
Sort1-203ENSMUST00000135636 Gtf2h3Q8VD76 309 aa19.58■□□□□ 0.73
Sort1-203ENSMUST00000135636 Orc1Q9Z1N2 840 aaKnown RBP19.58■□□□□ 0.73
Sort1-203ENSMUST00000135636 Cyp4f17G3UW78 524 aa19.58■□□□□ 0.73
Sort1-203ENSMUST00000135636 Grin1P35438 938 aa19.58■□□□□ 0.73
Sort1-203ENSMUST00000135636 Rgl2Q61193 778 aa19.58■□□□□ 0.73
Sort1-203ENSMUST00000135636 Lrrc27Q80YS5 523 aa19.58■□□□□ 0.73
Sort1-203ENSMUST00000135636 Cox18Q8VC74 331 aa19.58■□□□□ 0.73
Sort1-203ENSMUST00000135636 Cyp4f16Q99N17 524 aa19.58■□□□□ 0.73
Sort1-203ENSMUST00000135636 Smyd3Q9CWR2 428 aa19.58■□□□□ 0.73
Sort1-203ENSMUST00000135636 Abcb6Q9DC29 842 aa19.58■□□□□ 0.73
Sort1-203ENSMUST00000135636 Myo3aQ8K3H5 1613 aa19.58■□□□□ 0.73
Sort1-203ENSMUST00000135636 DseQ8BLI4 958 aa19.58■□□□□ 0.72
Sort1-203ENSMUST00000135636 Wrap53Q8VC51 532 aa19.58■□□□□ 0.72
Sort1-203ENSMUST00000135636 Pcdhb15Q91Y04 786 aa19.58■□□□□ 0.72
Sort1-203ENSMUST00000135636 Trmt11Q9CWH5 460 aa19.58■□□□□ 0.72
Sort1-203ENSMUST00000135636 Rnf17Q99MV7 1640 aa19.58■□□□□ 0.72
Sort1-203ENSMUST00000135636 Gemin5Q8BX17 1502 aaKnown RBP19.58■□□□□ 0.72
Sort1-203ENSMUST00000135636 Gm8113E0CXS8 587 aa19.58■□□□□ 0.72
Sort1-203ENSMUST00000135636 Clk2O35491 499 aa19.58■□□□□ 0.72
Sort1-203ENSMUST00000135636 Aoc3O70423 765 aa19.58■□□□□ 0.72
Sort1-203ENSMUST00000135636 Ddit3P35639 168 aa19.58■□□□□ 0.72
Sort1-203ENSMUST00000135636 Rsad1Q5SUV1 442 aa19.58■□□□□ 0.72
Sort1-203ENSMUST00000135636 Tasp1Q8R1G1 420 aa19.58■□□□□ 0.72
Sort1-203ENSMUST00000135636 Samsn1P57725 372 aa19.58■□□□□ 0.72
Sort1-203ENSMUST00000135636 Acbd5Q5XG73 508 aa19.58■□□□□ 0.72
Sort1-203ENSMUST00000135636 Fam120bQ6RI63 786 aa19.58■□□□□ 0.72
Sort1-203ENSMUST00000135636 Atg4cQ811C2 458 aa19.58■□□□□ 0.72
Sort1-203ENSMUST00000135636 Q8BGN9 141 aa19.58■□□□□ 0.72
Sort1-203ENSMUST00000135636 Ticam2Q8BJQ4 232 aa19.58■□□□□ 0.72
Sort1-203ENSMUST00000135636 Snx17Q8BVL3 470 aa19.58■□□□□ 0.72
Sort1-203ENSMUST00000135636 PrkceP16054 737 aa19.57■□□□□ 0.72
Sort1-203ENSMUST00000135636 Mtmr10Q7TPM9 771 aa19.57■□□□□ 0.72
Sort1-203ENSMUST00000135636 Ipo5Q8BKC5 1097 aaKnown RBP19.57■□□□□ 0.72
Sort1-203ENSMUST00000135636 MrrfQ9D6S7 262 aaKnown RBP19.57■□□□□ 0.72
Sort1-203ENSMUST00000135636 WapP01173 134 aa19.57■□□□□ 0.72
Sort1-203ENSMUST00000135636 Man1a2P39098 641 aa19.57■□□□□ 0.72
Sort1-203ENSMUST00000135636 Trim71Q1PSW8 855 aaKnown RBP19.57■□□□□ 0.72
Sort1-203ENSMUST00000135636 Tatdn3Q3U1C6 294 aa19.57■□□□□ 0.72
Sort1-203ENSMUST00000135636 Mybpc2Q5XKE0 1136 aa19.57■□□□□ 0.72
Sort1-203ENSMUST00000135636 Lrrc8aQ80WG5 810 aa19.57■□□□□ 0.72
Sort1-203ENSMUST00000135636 Rhobtb2Q91V93 728 aa19.57■□□□□ 0.72
Sort1-203ENSMUST00000135636 Stk33Q924X7 491 aa19.57■□□□□ 0.72
Sort1-203ENSMUST00000135636 Bco2Q99NF1 532 aa19.57■□□□□ 0.72
Sort1-203ENSMUST00000135636 Apba3O88888 571 aa19.57■□□□□ 0.72
Sort1-203ENSMUST00000135636 Mtfr1lQ9CWE0 289 aa19.57■□□□□ 0.72
Sort1-203ENSMUST00000135636 Iqcf1Q9D9K8 182 aa19.57■□□□□ 0.72
Sort1-203ENSMUST00000135636 Cep152A2AUM9 1736 aaKnown RBP19.57■□□□□ 0.72
Sort1-203ENSMUST00000135636 Atp2c2A7L9Z8 944 aa19.57■□□□□ 0.72
Sort1-203ENSMUST00000135636 E230025N22RikG5E8S3 482 aa19.57■□□□□ 0.72
Sort1-203ENSMUST00000135636 DselQ0VBN2 1207 aa19.57■□□□□ 0.72
Sort1-203ENSMUST00000135636 Hdac4Q6NZM9 1076 aa19.57■□□□□ 0.72
Sort1-203ENSMUST00000135636 Zfp454Q80Y34 536 aa19.57■□□□□ 0.72
Sort1-203ENSMUST00000135636 Snx30Q8CE50 437 aa19.57■□□□□ 0.72
Sort1-203ENSMUST00000135636 Unc45bQ8CGY6 931 aaKnown RBP19.57■□□□□ 0.72
Sort1-203ENSMUST00000135636 Rpap2Q8VC34 614 aa19.57■□□□□ 0.72
Sort1-203ENSMUST00000135636 Gm5926E9PWJ8 236 aa19.57■□□□□ 0.72
Sort1-203ENSMUST00000135636 Lmnb2P21619 596 aaKnown RBP19.57■□□□□ 0.72
Sort1-203ENSMUST00000135636 Atp11cQ9QZW0 1129 aa19.57■□□□□ 0.72
Sort1-203ENSMUST00000135636 Q66JV7 365 aa19.56■□□□□ 0.72
Sort1-203ENSMUST00000135636 Nlrp4eQ66X19 978 aa19.56■□□□□ 0.72
Retrieved 100 of 22,080 RNA–protein pairs in 19.5 ms