RNA–Protein interactions for RNA: ENSMUST00000113707.8

Tpm1-216, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-216ENSMUST00000113707 Il17cQ8K4C5 194 aa27.83■■■□□ 2.04
Tpm1-216ENSMUST00000113707 Atp6v0a4Q920R6 833 aa27.83■■■□□ 2.04
Tpm1-216ENSMUST00000113707 Cst12Q9DAN8 128 aa27.83■■■□□ 2.04
Tpm1-216ENSMUST00000113707 Znhit2Q9QY66 399 aa27.83■■■□□ 2.04
Tpm1-216ENSMUST00000113707 Ttc13A0A1L1SSC7 844 aa27.82■■■□□ 2.04
Tpm1-216ENSMUST00000113707 Gfpt1P47856 697 aa27.82■■■□□ 2.04
Tpm1-216ENSMUST00000113707 Tnnt2P50752 301 aa27.82■■■□□ 2.04
Tpm1-216ENSMUST00000113707 Ccr1P51675 355 aa27.82■■■□□ 2.04
Tpm1-216ENSMUST00000113707 ItpripQ3TNL8 555 aa27.82■■■□□ 2.04
Tpm1-216ENSMUST00000113707 Tlr11Q6R5P0 926 aa27.82■■■□□ 2.04
Tpm1-216ENSMUST00000113707 Znf507Q6ZPY5 941 aa27.82■■■□□ 2.04
Tpm1-216ENSMUST00000113707 VillQ91YD6 859 aa27.82■■■□□ 2.04
Tpm1-216ENSMUST00000113707 Tekt1Q9DAJ2 418 aa27.82■■■□□ 2.04
Tpm1-216ENSMUST00000113707 Fut2Q9JL27 347 aa27.82■■■□□ 2.04
Tpm1-216ENSMUST00000113707 4930544D05RikJ3QK56 214 aa27.81■■■□□ 2.04
Tpm1-216ENSMUST00000113707 AfmO89020 608 aa27.81■■■□□ 2.04
Tpm1-216ENSMUST00000113707 Tfdp1Q08639 410 aa27.81■■■□□ 2.04
Tpm1-216ENSMUST00000113707 Tpd52Q62393 224 aa27.81■■■□□ 2.04
Tpm1-216ENSMUST00000113707 TxlnaQ6PAM1 554 aaKnown RBP27.81■■■□□ 2.04
Tpm1-216ENSMUST00000113707 Rnf139Q7TMV1 668 aa27.81■■■□□ 2.04
Tpm1-216ENSMUST00000113707 Mapk15Q80Y86 549 aa27.81■■■□□ 2.04
Tpm1-216ENSMUST00000113707 Dlk2Q8K1E3 382 aa27.81■■■□□ 2.04
Tpm1-216ENSMUST00000113707 Arfgap2Q99K28 520 aa27.81■■■□□ 2.04
Tpm1-216ENSMUST00000113707 AdarQ99MU3 1178 aaKnown RBP27.81■■■□□ 2.04
Tpm1-216ENSMUST00000113707 PolkQ9QUG2 852 aa27.81■■■□□ 2.04
Tpm1-216ENSMUST00000113707 Myo5aQ99104 1853 aaKnown RBP27.81■■■□□ 2.04
Tpm1-216ENSMUST00000113707 PrkcbP68404 671 aa27.81■■■□□ 2.04
Tpm1-216ENSMUST00000113707 Top1Q04750 767 aaKnown RBP27.81■■■□□ 2.04
Tpm1-216ENSMUST00000113707 Etaa1Q5SVT3 877 aa27.81■■■□□ 2.04
Tpm1-216ENSMUST00000113707 Q66JV7 365 aa27.81■■■□□ 2.04
Tpm1-216ENSMUST00000113707 Celf3Q8CIN6 465 aa27.81■■■□□ 2.04
Tpm1-216ENSMUST00000113707 Nup50Q9JIH2 466 aaKnown RBP27.81■■■□□ 2.04
Tpm1-216ENSMUST00000113707 Uchl3Q9JKB1 230 aa27.81■■■□□ 2.04
Tpm1-216ENSMUST00000113707 Znf354bQ9QXT9 601 aa27.81■■■□□ 2.04
Tpm1-216ENSMUST00000113707 Pja1O55176 578 aa27.8■■■□□ 2.04
Tpm1-216ENSMUST00000113707 Tcp1P11983 556 aaKnown RBP27.8■■■□□ 2.04
Tpm1-216ENSMUST00000113707 Cyp2b10P12791 500 aa27.8■■■□□ 2.04
Tpm1-216ENSMUST00000113707 NfiaQ02780 532 aa27.8■■■□□ 2.04
Tpm1-216ENSMUST00000113707 Nlgn2Q69ZK9 836 aa27.8■■■□□ 2.04
Tpm1-216ENSMUST00000113707 Zfp943Q6NZP4 507 aa27.8■■■□□ 2.04
Tpm1-216ENSMUST00000113707 HomezQ80W88 542 aa27.8■■■□□ 2.04
Tpm1-216ENSMUST00000113707 Slc26a6Q8CIW6 758 aa27.8■■■□□ 2.04
Tpm1-216ENSMUST00000113707 EmcnQ9R0H2 261 aa27.8■■■□□ 2.04
Tpm1-216ENSMUST00000113707 Prmt2Q9R144 448 aa27.8■■■□□ 2.04
Tpm1-216ENSMUST00000113707 Adgra2Q91ZV8 1336 aa27.8■■■□□ 2.04
Tpm1-216ENSMUST00000113707 Smim10l2aA0A0B4J1F8 78 aa27.79■■■□□ 2.04
Tpm1-216ENSMUST00000113707 OgdhlE9Q7L0 1029 aa27.79■■■□□ 2.04
Tpm1-216ENSMUST00000113707 DgkkE9Q7N4 1118 aa27.79■■■□□ 2.04
Tpm1-216ENSMUST00000113707 VegfaQ00731 214 aa27.79■■■□□ 2.04
Tpm1-216ENSMUST00000113707 Ncapg2Q6DFV1 1138 aa27.79■■■□□ 2.04
Tpm1-216ENSMUST00000113707 Slc38a7Q8BWH0 463 aa27.79■■■□□ 2.04
Tpm1-216ENSMUST00000113707 Rint1Q8BZ36 792 aa27.79■■■□□ 2.04
Tpm1-216ENSMUST00000113707 Trim32Q8CH72 655 aa27.79■■■□□ 2.04
Tpm1-216ENSMUST00000113707 Tlr3Q99MB1 905 aa27.79■■■□□ 2.04
Tpm1-216ENSMUST00000113707 Dis3Q9CSH3 958 aaKnown RBP27.79■■■□□ 2.04
Tpm1-216ENSMUST00000113707 Castor1Q9CWQ8 331 aa27.79■■■□□ 2.04
Tpm1-216ENSMUST00000113707 Gtf3c6Q9D8P7 227 aa27.79■■■□□ 2.04
Tpm1-216ENSMUST00000113707 Pds5aQ6A026 1332 aa27.79■■■□□ 2.04
Tpm1-216ENSMUST00000113707 Taf1Q80UV9 1891 aa27.79■■■□□ 2.04
Tpm1-216ENSMUST00000113707 1700017N19RikA0A087WPJ1 469 aa27.78■■■□□ 2.04
Tpm1-216ENSMUST00000113707 Xirp1O70373 1129 aa27.78■■■□□ 2.04
Tpm1-216ENSMUST00000113707 Nploc4P60670 608 aa27.78■■■□□ 2.04
Tpm1-216ENSMUST00000113707 Trmt1Q3TX08 663 aa27.78■■■□□ 2.04
Tpm1-216ENSMUST00000113707 FancbQ5XJY6 703 aa27.78■■■□□ 2.04
Tpm1-216ENSMUST00000113707 Nucks1Q80XU3 234 aaKnown RBP27.78■■■□□ 2.04
Tpm1-216ENSMUST00000113707 Pkn2Q8BWW9 983 aa27.78■■■□□ 2.04
Tpm1-216ENSMUST00000113707 Tll2Q9WVM6 1012 aa27.78■■■□□ 2.04
Tpm1-216ENSMUST00000113707 Gm28919A0A087WP35 240 aa27.78■■■□□ 2.04
Tpm1-216ENSMUST00000113707 Gucy1b3O54865 620 aa27.78■■■□□ 2.04
Tpm1-216ENSMUST00000113707 Actn3O88990 900 aaKnown RBP27.78■■■□□ 2.04
Tpm1-216ENSMUST00000113707 Ttc39dQ0VF76 604 aa27.78■■■□□ 2.04
Tpm1-216ENSMUST00000113707 Trim43aQ3TL54 445 aa27.78■■■□□ 2.04
Tpm1-216ENSMUST00000113707 Rnpc3Q3UZ01 514 aaKnown RBP27.78■■■□□ 2.04
Tpm1-216ENSMUST00000113707 BC051142Q3V0M8 400 aa27.78■■■□□ 2.04
Tpm1-216ENSMUST00000113707 Icam5Q60625 917 aa27.78■■■□□ 2.04
Tpm1-216ENSMUST00000113707 Rnf25Q9QZR0 456 aa27.78■■■□□ 2.04
Tpm1-216ENSMUST00000113707 Zbtb12Q9Z150 459 aa27.78■■■□□ 2.04
Tpm1-216ENSMUST00000113707 Mtco1P00397 514 aa27.77■■■□□ 2.04
Tpm1-216ENSMUST00000113707 Pgk2P09041 417 aa27.77■■■□□ 2.04
Tpm1-216ENSMUST00000113707 TxkP42682 527 aa27.77■■■□□ 2.04
Tpm1-216ENSMUST00000113707 Clcn3P51791 818 aa27.77■■■□□ 2.04
Tpm1-216ENSMUST00000113707 ZbbxQ0P5X5 716 aa27.77■■■□□ 2.04
Tpm1-216ENSMUST00000113707 Srebf2Q3U1N2 1130 aa27.77■■■□□ 2.04
Tpm1-216ENSMUST00000113707 Snx27Q3UHD6 539 aa27.77■■■□□ 2.04
Tpm1-216ENSMUST00000113707 Znf532Q6NXK2 1036 aa27.77■■■□□ 2.04
Tpm1-216ENSMUST00000113707 Map1sQ8C052 973 aa27.77■■■□□ 2.04
Tpm1-216ENSMUST00000113707 Ccser1Q8C0C4 895 aa27.77■■■□□ 2.04
Tpm1-216ENSMUST00000113707 Ubxn6Q99PL6 442 aa27.77■■■□□ 2.04
Tpm1-216ENSMUST00000113707 Gm13084A2A8N0 494 aa27.76■■■□□ 2.04
Tpm1-216ENSMUST00000113707 Leg1Q8C6C9 337 aa27.76■■■□□ 2.04
Tpm1-216ENSMUST00000113707 Trim5E9PV98 497 aa27.76■■■□□ 2.03
Tpm1-216ENSMUST00000113707 Vmn2r15L7N2A0 855 aa27.76■■■□□ 2.03
Tpm1-216ENSMUST00000113707 Mdh1P14152 334 aa27.76■■■□□ 2.03
Tpm1-216ENSMUST00000113707 SpoplQ2M2N2 392 aa27.76■■■□□ 2.03
Tpm1-216ENSMUST00000113707 LbrQ3U9G9 626 aaKnown RBP27.76■■■□□ 2.03
Tpm1-216ENSMUST00000113707 Krt35Q497I4 455 aa27.76■■■□□ 2.03
Tpm1-216ENSMUST00000113707 Cd180Q62192 661 aa27.76■■■□□ 2.03
Tpm1-216ENSMUST00000113707 FAM120AQ6A0A9 1112 aaKnown RBP27.76■■■□□ 2.03
Tpm1-216ENSMUST00000113707 Gemin4Q6P6L6 1058 aaKnown RBP27.76■■■□□ 2.03
Tpm1-216ENSMUST00000113707 Zswim4Q8C7B8 1101 aa27.76■■■□□ 2.03
Retrieved 100 of 22,080 RNA–protein pairs in 12.8 ms