RNA–Protein interactions for RNA: ENSMUST00000106035.7

Ccdc28b-202, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

TSL 1 (best) BASIC

Gene Ccdc28b, Length 821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-202ENSMUST00000106035 Vmn2r121A2BE32 847 aa13.46□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Grik3B1AS29 919 aa13.46□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Gm8369E9PZI3 166 aa13.46□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Hoxd8P23463 289 aa13.46□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Nhlh1Q02576 133 aa13.46□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Mark3Q03141 753 aa13.46□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Mxd4Q60948 209 aa13.46□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Tbc1d1Q60949 1255 aa13.46□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Ptpn14Q62130 1189 aa13.46□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Gpbp1Q6NXH3 473 aaKnown RBP13.46□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Msantd2Q6NZR2 559 aa13.46□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 CyldQ80TQ2 952 aa13.46□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Cep85Q8BMK0 761 aa13.46□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Qsox1Q8BND5 748 aa13.46□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Rab11fip4Q8BQP8 635 aa13.46□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Rd3Q8BRE0 195 aa13.46□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Kank2Q8BX02 843 aa13.46□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Zc3h6Q8BYK8 1177 aa13.46□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Rftn2Q8CHX7 500 aa13.46□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Kiaa0391Q8JZY4 584 aaKnown RBP13.46□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Fam151aQ8QZW3 608 aa13.46□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Trhr2Q9ERT2 382 aa13.46□□□□□ -0.25
Ccdc28b-202ENSMUST00000106035 Sh2d4bA6X942 431 aa13.45□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Maml3D4QGC2 1135 aa13.45□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Gimd1E9PW74 217 aa13.45□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Prr22F6TNE3 422 aa13.45□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Serpinb3aG3X9V8 387 aa13.45□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Smim22J3QP37 91 aa13.45□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Vmn2r111K7N674 857 aa13.45□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Grem1O70326 184 aa13.45□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Orc4O88708 433 aa13.45□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 FasP25446 327 aa13.45□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 March5Q3KNM2 278 aa13.45□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Ube2zQ3UE37 356 aa13.45□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Dmc1Q61880 340 aa13.45□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Xpnpep1Q6P1B1 623 aa13.45□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Dzip3Q7TPV2 1204 aa13.45□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Rexo1Q7TT28 1213 aa13.45□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Ostm1Q8BGT0 338 aa13.45□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Tmem161aQ8VCA6 480 aa13.45□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Tmem30aQ8VEK0 364 aa13.45□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Cabp7Q91ZM8 215 aa13.45□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Krt82Q99M74 516 aa13.45□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Lman1Q9D0F3 517 aa13.45□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Oxct1Q9D0K2 520 aaKnown RBP13.45□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Igdcc4Q9EQS9 1252 aa13.45□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Krt85Q9Z2T6 507 aa13.45□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Unc80Q8BLN6 3261 aa13.45□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Cdr2lA2A6T1 465 aa13.44□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Ppfia4B8QI36 1187 aa13.44□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 P01734 135 aa13.44□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Krt18P05784 423 aa13.44□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Cyp11b2P15539 500 aa13.44□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Lsp1P19973 330 aa13.44□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Rasa2P58069 847 aa13.44□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 H2-Q2Q4KN81 360 aa13.44□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Wdr18Q4VBE8 431 aa13.44□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Mindy1Q76LS9 468 aa13.44□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 St18Q80TY4 1045 aa13.44□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Elac2Q80Y81 831 aaKnown RBP13.44□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 ToporsQ80Z37 1033 aa13.44□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Amz1Q8BVF9 502 aa13.44□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Lrrd1Q8C0R9 853 aa13.44□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Lonp1Q8CGK3 949 aaKnown RBP13.44□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Gpr153Q8K0Z9 631 aa13.44□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 DarsQ922B2 501 aaKnown RBP13.44□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Pls3Q99K51 630 aa13.44□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Trim11Q99PQ2 467 aa13.44□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Krt23Q99PS0 422 aa13.44□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Ndufaf7Q9CWG8 436 aa13.44□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Zfp623Q9CY99 499 aa13.44□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Atg7Q9D906 698 aa13.44□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Plcb1Q9Z1B3 1216 aa13.44□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 AspmQ8CJ27 3122 aa13.44□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Tp53bp1P70399 1969 aa13.43□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Spata31d1aE9QA35 1336 aa13.43□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Cacna1hO88427 2365 aa13.43□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Veph1A1A535 833 aa13.43□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Wfdc11A2A5H7 82 aa13.43□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Ace3D0G895 737 aa13.43□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Clca3bE9PUL3 1044 aa13.43□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Actn3O88990 900 aaKnown RBP13.43□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Itgb1P09055 798 aaKnown RBP13.43□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Pgap2Q3TQR0 254 aa13.43□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Fam196aQ3USH1 422 aa13.43□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Asap3Q5U464 904 aa13.43□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Mpp4Q6P7F1 635 aa13.43□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Cachd1Q6PDJ1 1288 aa13.43□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Nod1Q8BHB0 953 aa13.43□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Phka2Q8BWJ3 1235 aa13.43□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Srek1Q8BZX4 494 aaKnown RBP13.43□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Kct2Q8K201 259 aa13.43□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Krt79Q8VED5 531 aa13.43□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Acot11Q8VHQ9 594 aa13.43□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Fuca1Q99LJ1 452 aa13.43□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 NaspQ99MD9 773 aaKnown RBP13.43□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 SdhbQ9CQA3 282 aa13.43□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Iqca1Q9CUL5 857 aa13.43□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 GatmQ9D964 423 aaKnown RBP13.43□□□□□ -0.26
Ccdc28b-202ENSMUST00000106035 Syde1Q9DBZ9 737 aa13.43□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 46.8 ms