RNA–Protein interactions for RNA: ENSMUST00000086483.3

Ccdc60-202, Transcript of Coiled-coil domain-containing protein 60, mousemouse

TSL 1 (best) BASIC

Gene Ccdc60, Length 2,168 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60-202ENSMUST00000086483 Strip2Q8C9H6 844 aa12.11□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Gpc3Q8CFZ4 579 aa12.11□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Acsf2Q8VCW8 615 aa12.11□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 B4galt3Q91YY2 395 aa12.11□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Atg7Q9D906 698 aa12.11□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Atp13a1Q9EPE9 1200 aaKnown RBP12.11□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 1700001O22RikA2APZ1 375 aa12.11□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Ces1bD3Z5G7 567 aa12.11□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Gm42957D6RFQ2 366 aa12.11□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 RaxO35602 342 aa12.11□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Gas2P11862 314 aaKnown RBP12.11□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 LpoQ5SW46 710 aa12.11□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Has1Q61647 583 aa12.11□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Prpf31Q8CCF0 499 aaKnown RBP12.11□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Stoml1Q8CI66 399 aa12.11□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Trim61Q8JZK6 461 aa12.11□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Hspbp1Q99P31 357 aaKnown RBP12.11□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Saal1Q9D2C2 474 aa12.11□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 CenpkQ9ESN5 271 aa12.11□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Kcnh3Q9WVJ0 1095 aa12.11□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Sf3b1Q99NB9 1304 aaKnown RBP12.1□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Gm45713A0A1B0GS68 446 aa12.1□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Plcb2A3KGF7 1181 aa12.1□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Ccdc152E9PX14 254 aa12.1□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Dcpp2E9PYC2 171 aa12.1□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Gm3095E9Q058 166 aa12.1□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Dcpp1L7N1X9 171 aa12.1□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 PtenO08586 403 aa12.1□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Tnk2O54967 1055 aa12.1□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Itm2bO89051 266 aa12.1□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Nucb1Q02819 459 aaKnown RBP12.1□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Wee2Q66JT0 555 aa12.1□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Rps6kb1Q8BSK8 525 aa12.1□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Smg8Q8VE18 991 aa12.1□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Ppp6r3Q922D4 844 aa12.1□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Homer2Q9QWW1 354 aa12.1□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Egfl7Q9QXT5 275 aa12.1□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Nr2e3Q9QXZ7 395 aa12.1□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Extl3Q9WVL6 918 aa12.1□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Bag6Q9Z1R2 1154 aaKnown RBP12.1□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Arhgef37A1IGU4 676 aa12.09□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Ppfia4B8QI36 1187 aa12.09□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Gm8369E9PZI3 166 aa12.09□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Grem1O70326 184 aa12.09□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Ms4a2P20490 235 aa12.09□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Cyp2c65Q148B1 490 aa12.09□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Stk11ipQ3TAA7 1072 aa12.09□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Nlrp2Q4PLS0 1046 aaKnown RBP12.09□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Fbxw11Q5SRY7 542 aaKnown RBP12.09□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Ipo5Q8BKC5 1097 aaKnown RBP12.09□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Tshz3Q8CGV9 1081 aa12.09□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 CerkQ8K4Q7 531 aa12.09□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Tspan8Q8R3G9 235 aa12.09□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Csde1Q91W50 798 aaKnown RBP12.09□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Emc2Q9CRD2 297 aa12.09□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Vav3Q9R0C8 847 aa12.09□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Wdr90Q6ZPG2 1874 aa12.09□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Chd7A2AJK6 2986 aaKnown RBP12.09□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Gm5737A0A140LI11 423 aa12.09□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Per1O35973 1291 aa12.09□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Fgfr1P16092 822 aa12.09□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 CebpaP53566 359 aa12.09□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Krt87Q6IMF0 495 aa12.09□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 CslQ80X68 466 aa12.09□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Fbxo9Q8BK06 437 aa12.09□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Lin9Q8C735 542 aa12.09□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 BrapQ99MP8 591 aa12.09□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 CntrlA2AL36 2334 aa12.09□□□□□ -0.47
Ccdc60-202ENSMUST00000086483 Ralgps1A2AR50 585 aa12.08□□□□□ -0.48
Ccdc60-202ENSMUST00000086483 Tex13cD3YU32 604 aa12.08□□□□□ -0.48
Ccdc60-202ENSMUST00000086483 Mpig6bD7PDD4 242 aa12.08□□□□□ -0.48
Ccdc60-202ENSMUST00000086483 Mroh8E9PYI4 1049 aa12.08□□□□□ -0.48
Ccdc60-202ENSMUST00000086483 Gm4841E9QAA8 417 aa12.08□□□□□ -0.48
Ccdc60-202ENSMUST00000086483 Aimp1P31230 310 aaKnown RBP12.08□□□□□ -0.48
Ccdc60-202ENSMUST00000086483 Nek1P51954 1203 aa12.08□□□□□ -0.48
Ccdc60-202ENSMUST00000086483 Hoxd13P70217 339 aa12.08□□□□□ -0.48
Ccdc60-202ENSMUST00000086483 Mxd4Q60948 209 aa12.08□□□□□ -0.48
Ccdc60-202ENSMUST00000086483 Shkbp1Q6P7W2 704 aa12.08□□□□□ -0.48
Ccdc60-202ENSMUST00000086483 Rps9Q6ZWN5 194 aaKnown RBP12.08□□□□□ -0.48
Ccdc60-202ENSMUST00000086483 Raver2Q7TPD6 673 aa12.08□□□□□ -0.48
Ccdc60-202ENSMUST00000086483 EtnpplQ8BWU8 499 aa12.08□□□□□ -0.48
Ccdc60-202ENSMUST00000086483 Bag4Q8CI61 457 aa12.08□□□□□ -0.48
Ccdc60-202ENSMUST00000086483 Fam161aQ8QZV6 448 aa12.08□□□□□ -0.48
Ccdc60-202ENSMUST00000086483 Zdhhc5Q8VDZ4 715 aa12.08□□□□□ -0.48
Ccdc60-202ENSMUST00000086483 Sfxn1Q99JR1 322 aa12.08□□□□□ -0.48
Ccdc60-202ENSMUST00000086483 YwhabQ9CQV8 246 aaKnown RBP12.08□□□□□ -0.48
Ccdc60-202ENSMUST00000086483 Lamtor5Q9D1L9 91 aa12.08□□□□□ -0.48
Ccdc60-202ENSMUST00000086483 Adam23Q9R1V7 829 aa12.08□□□□□ -0.48
Ccdc60-202ENSMUST00000086483 Padi3Q9Z184 664 aa12.08□□□□□ -0.48
Ccdc60-202ENSMUST00000086483 Gm4985A2ALC6 410 aa12.08□□□□□ -0.48
Ccdc60-202ENSMUST00000086483 Skint8A7XV07 398 aa12.08□□□□□ -0.48
Ccdc60-202ENSMUST00000086483 Cdkl5Q3UTQ8 938 aa12.08□□□□□ -0.48
Ccdc60-202ENSMUST00000086483 Mpp4Q6P7F1 635 aa12.08□□□□□ -0.48
Ccdc60-202ENSMUST00000086483 Lrfn2Q80TG9 788 aa12.08□□□□□ -0.48
Ccdc60-202ENSMUST00000086483 Tcp10aQ80W76 438 aa12.08□□□□□ -0.48
Ccdc60-202ENSMUST00000086483 Znf467Q8JZL0 594 aa12.08□□□□□ -0.48
Ccdc60-202ENSMUST00000086483 Mlf2Q99KX1 247 aa12.08□□□□□ -0.48
Ccdc60-202ENSMUST00000086483 Ndufb9Q9CQJ8 179 aa12.08□□□□□ -0.48
Ccdc60-202ENSMUST00000086483 Serbp1Q9CY58 407 aaKnown RBP12.08□□□□□ -0.48
Ccdc60-202ENSMUST00000086483 Arpp21Q9DCB4 807 aa12.08□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 51.5 ms