RNA–Protein interactions for RNA: ENSMUST00000071057.13

Ddx55-201, Transcript of ATP-dependent RNA helicase DDX55, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx55, Length 2,799 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55-201ENSMUST00000071057 Arfgap2Q99K28 520 aa12.21□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Usp14Q9JMA1 493 aaKnown RBP12.21□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Prpf40aQ9R1C7 953 aaKnown RBP12.21□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Slfn14V9GXG1 899 aa12.21□□□□□ -0.45
Ddx55-201ENSMUST00000071057 Cyth3O08967 399 aa12.21□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Mmp10O55123 476 aa12.21□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Cd44P15379 778 aa12.21□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Gja3Q64448 417 aa12.21□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Ncapg2Q6DFV1 1138 aa12.21□□□□□ -0.46
Ddx55-201ENSMUST00000071057 E2f7Q6S7F2 904 aa12.21□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Acad11Q80XL6 779 aa12.21□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Tsga8Q9JJL0 238 aa12.21□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Nfu1Q9QZ23 255 aa12.21□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Gm45261A0A1B0GSP6 197 aa12.2□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Mfsd4b4J3QNS5 503 aa12.2□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Col9a2Q07643 688 aa12.2□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Tex11Q14AT2 947 aa12.2□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Fdxacb1Q3UY23 622 aa12.2□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Dlg4Q62108 724 aa12.2□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Lrrc1Q80VQ1 524 aa12.2□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Zc3h6Q8BYK8 1177 aa12.2□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Stard7Q8R1R3 373 aa12.2□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Ttc8Q8VD72 515 aa12.2□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Q91Z58 1206 aa12.2□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Bco2Q99NF1 532 aa12.2□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Cyp2s1Q9DBX6 501 aa12.2□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Gfpt2Q9Z2Z9 682 aa12.2□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Polr2aP08775 1970 aaKnown RBP12.2□□□□□ -0.46
Ddx55-201ENSMUST00000071057 D830030K20RikE9PYQ5 218 aa12.2□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Akr1b10G5E895 316 aa12.2□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Gm3043K7N693 218 aa12.2□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Gm16440K7N6G6 218 aa12.2□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Gm2244L7N2A3 218 aa12.2□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Gm3278L7N2D2 218 aa12.2□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Gm8271L7N2E2 218 aa12.2□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Mdm4O35618 489 aa12.2□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Mmp15O54732 657 aa12.2□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Ag2Q3UPL5 249 aa12.2□□□□□ -0.46
Ddx55-201ENSMUST00000071057 BC051142Q3V0M8 400 aa12.2□□□□□ -0.46
Ddx55-201ENSMUST00000071057 E2f8Q58FA4 860 aa12.2□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Msantd2Q6NZR2 559 aa12.2□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Tbc1d22bQ80VE5 505 aa12.2□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Kiaa0391Q8JZY4 584 aaKnown RBP12.2□□□□□ -0.46
Ddx55-201ENSMUST00000071057 IntS13Q8QZV7 732 aa12.2□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Rnf34Q99KR6 376 aa12.2□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Ascc1Q9D8Z1 356 aaKnown RBP12.2□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Fthl17aQ9DAX0 182 aa12.2□□□□□ -0.46
Ddx55-201ENSMUST00000071057 SisF8VQM5 1818 aa12.19□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Ttll6A4Q9E8 822 aa12.19□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Exoc3l2D3YUP5 789 aa12.19□□□□□ -0.46
Ddx55-201ENSMUST00000071057 5830473C10RikF8VQ07 620 aa12.19□□□□□ -0.46
Ddx55-201ENSMUST00000071057 DtnbO70585 659 aa12.19□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Magea6O89010 325 aa12.19□□□□□ -0.46
Ddx55-201ENSMUST00000071057 PtpraP18052 829 aa12.19□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Hoxc10P31257 342 aa12.19□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Polr2fP61219 127 aa12.19□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Sv2cQ69ZS6 727 aa12.19□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Magea3Q6T340 320 aa12.19□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Sh3d21Q7TSG5 549 aa12.19□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Baiap3Q80TT2 1134 aa12.19□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Gjc2Q8BQU6 440 aa12.19□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Bpifb6Q8BU51 449 aa12.19□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Pnma1Q8C1C8 353 aa12.19□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Pex5lQ8C437 567 aa12.19□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Leng8Q8CBY3 785 aaKnown RBP12.19□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Usb1Q91W78 267 aa12.19□□□□□ -0.46
Ddx55-201ENSMUST00000071057 DaglbQ91WC9 669 aa12.19□□□□□ -0.46
Ddx55-201ENSMUST00000071057 PawrQ925B0 333 aa12.19□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Npm3Q9CPP0 175 aaKnown RBP12.19□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Tlr2Q9QUN7 784 aa12.19□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Cry2Q9R194 592 aa12.19□□□□□ -0.46
Ddx55-201ENSMUST00000071057 NrapQ80XB4 1728 aa12.19□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Mms22lB1AUR6 1238 aa12.19□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Magea4F2Z493 315 aa12.19□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Xbp1O35426 267 aa12.19□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Adcy7P51829 1099 aa12.19□□□□□ -0.46
Ddx55-201ENSMUST00000071057 LxnP70202 222 aa12.19□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Neurl1bQ0MW30 546 aa12.19□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Xpnpep1Q6P1B1 623 aa12.19□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Dusp19Q8K4T5 220 aa12.19□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Smc1aQ9CU62 1233 aaKnown RBP12.19□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Luc7lQ9CYI4 371 aaKnown RBP12.19□□□□□ -0.46
Ddx55-201ENSMUST00000071057 St6galnac1Q9QZ39 526 aa12.19□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Oog1E9Q5G7 496 aa12.18□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Pik3r1P26450 724 aa12.18□□□□□ -0.46
Ddx55-201ENSMUST00000071057 VdrP48281 422 aa12.18□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Krt15Q61414 452 aa12.18□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Hook2Q7TMK6 716 aa12.18□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Dusp4Q8BFV3 398 aa12.18□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Nipa1Q8BHK1 323 aa12.18□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Spata21Q8BHW6 681 aa12.18□□□□□ -0.46
Ddx55-201ENSMUST00000071057 PdxkQ8K183 312 aa12.18□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Ubxn1Q922Y1 297 aa12.18□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Cd2bp2Q9CWK3 342 aaKnown RBP12.18□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Fam187aQ9D3R5 417 aa12.18□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Spata17Q9D552 379 aa12.18□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Prl2b1Q9DAZ2 228 aa12.18□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Cdc42ep4Q9JM96 349 aaKnown RBP12.18□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Btbd18A0A0A6YY25 723 aa12.18□□□□□ -0.46
Ddx55-201ENSMUST00000071057 Ldlrad1D3YYZ1 218 aa12.18□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 39.8 ms