RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Riox2Q8CD15 465 aa14.41□□□□□ -0.1
Nup88-201ENSMUST00000035283 NptxrQ99J85 493 aa14.41□□□□□ -0.1
Nup88-201ENSMUST00000035283 Mipol1Q9D9F8 279 aa14.41□□□□□ -0.1
Nup88-201ENSMUST00000035283 Eid1Q9DCR4 169 aa14.41□□□□□ -0.1
Nup88-201ENSMUST00000035283 Smok2bQ9QYZ3 484 aa14.41□□□□□ -0.1
Nup88-201ENSMUST00000035283 Smok2aQ9QYZ6 504 aa14.41□□□□□ -0.1
Nup88-201ENSMUST00000035283 Uts2Q9QZQ3 123 aa14.41□□□□□ -0.1
Nup88-201ENSMUST00000035283 Pdcd7Q9WTY1 482 aa14.41□□□□□ -0.1
Nup88-201ENSMUST00000035283 Mpp2Q9WV34 552 aa14.41□□□□□ -0.1
Nup88-201ENSMUST00000035283 Snx1Q9WV80 522 aa14.41□□□□□ -0.1
Nup88-201ENSMUST00000035283 Cntnap2Q9CPW0 1332 aa14.41□□□□□ -0.1
Nup88-201ENSMUST00000035283 DgkkE9Q7N4 1118 aa14.4□□□□□ -0.1
Nup88-201ENSMUST00000035283 OatP29758 439 aa14.4□□□□□ -0.1
Nup88-201ENSMUST00000035283 Cxcr2P35343 359 aa14.4□□□□□ -0.1
Nup88-201ENSMUST00000035283 GckP52792 465 aa14.4□□□□□ -0.1
Nup88-201ENSMUST00000035283 Cops2P61202 443 aaKnown RBP14.4□□□□□ -0.1
Nup88-201ENSMUST00000035283 SpdyaQ5IBH7 310 aa14.4□□□□□ -0.1
Nup88-201ENSMUST00000035283 Rgl1Q60695 768 aa14.4□□□□□ -0.1
Nup88-201ENSMUST00000035283 Ppp2r5aQ6PD03 486 aa14.4□□□□□ -0.1
Nup88-201ENSMUST00000035283 SnphQ80U23 495 aa14.4□□□□□ -0.1
Nup88-201ENSMUST00000035283 Sgsm1Q8BPQ7 1093 aa14.4□□□□□ -0.1
Nup88-201ENSMUST00000035283 Fam118bQ8C569 351 aa14.4□□□□□ -0.1
Nup88-201ENSMUST00000035283 C130026I21RikQ8C898 291 aa14.4□□□□□ -0.1
Nup88-201ENSMUST00000035283 Slc26a6Q8CIW6 758 aa14.4□□□□□ -0.1
Nup88-201ENSMUST00000035283 Rpa1Q8VEE4 623 aaKnown RBP14.4□□□□□ -0.1
Nup88-201ENSMUST00000035283 CrygnQ8VHL5 183 aa14.4□□□□□ -0.1
Nup88-201ENSMUST00000035283 Ttc5Q99LG4 440 aa14.4□□□□□ -0.1
Nup88-201ENSMUST00000035283 Prss23Q9D6X6 382 aa14.4□□□□□ -0.1
Nup88-201ENSMUST00000035283 Orc3Q9JK30 715 aaKnown RBP14.4□□□□□ -0.1
Nup88-201ENSMUST00000035283 Noc2lQ9WV70 747 aaKnown RBP14.4□□□□□ -0.1
Nup88-201ENSMUST00000035283 Znf804aA2AKY4 1200 aa14.4□□□□□ -0.1
Nup88-201ENSMUST00000035283 Kcnk16G5E845 292 aa14.4□□□□□ -0.1
Nup88-201ENSMUST00000035283 Ppp1r9aH3BJD6 1292 aa14.4□□□□□ -0.1
Nup88-201ENSMUST00000035283 Chrm1P12657 460 aa14.4□□□□□ -0.1
Nup88-201ENSMUST00000035283 Stmn4P63042 189 aa14.4□□□□□ -0.1
Nup88-201ENSMUST00000035283 Aars2Q14CH7 980 aa14.4□□□□□ -0.1
Nup88-201ENSMUST00000035283 Phactr1Q2M3X8 580 aa14.4□□□□□ -0.1
Nup88-201ENSMUST00000035283 Wdr41Q3UDP0 460 aa14.4□□□□□ -0.1
Nup88-201ENSMUST00000035283 Sec23ipQ6NZC7 998 aa14.4□□□□□ -0.1
Nup88-201ENSMUST00000035283 Sh3d21Q7TSG5 549 aa14.4□□□□□ -0.1
Nup88-201ENSMUST00000035283 Elmo3Q8BYZ7 720 aa14.4□□□□□ -0.1
Nup88-201ENSMUST00000035283 Acat1Q8QZT1 424 aa14.4□□□□□ -0.1
Nup88-201ENSMUST00000035283 Usp33Q8R5K2 909 aa14.4□□□□□ -0.1
Nup88-201ENSMUST00000035283 Lpgat1Q91YX5 370 aa14.4□□□□□ -0.1
Nup88-201ENSMUST00000035283 HgsQ99LI8 775 aa14.4□□□□□ -0.1
Nup88-201ENSMUST00000035283 Tdrd12Q9CWU0 1215 aa14.4□□□□□ -0.1
Nup88-201ENSMUST00000035283 Riok3Q9DBU3 519 aaKnown RBP14.4□□□□□ -0.1
Nup88-201ENSMUST00000035283 Tcirg1Q9JHF5 834 aa14.4□□□□□ -0.1
Nup88-201ENSMUST00000035283 Pard6bQ9JK83 371 aa14.4□□□□□ -0.1
Nup88-201ENSMUST00000035283 Prkab1Q9R078 270 aa14.4□□□□□ -0.1
Nup88-201ENSMUST00000035283 Rnf103Q9R1W3 683 aa14.4□□□□□ -0.1
Nup88-201ENSMUST00000035283 Bpifb9bA2AJD1 591 aa14.39□□□□□ -0.11
Nup88-201ENSMUST00000035283 Ces1cP23953 554 aa14.39□□□□□ -0.11
Nup88-201ENSMUST00000035283 Map2k1P31938 393 aa14.39□□□□□ -0.11
Nup88-201ENSMUST00000035283 Chrna5Q2MKA5 467 aa14.39□□□□□ -0.11
Nup88-201ENSMUST00000035283 Yipf3Q3UDR8 347 aa14.39□□□□□ -0.11
Nup88-201ENSMUST00000035283 Rhox12Q4TU81 186 aa14.39□□□□□ -0.11
Nup88-201ENSMUST00000035283 Bpifb9aQ80XI7 591 aa14.39□□□□□ -0.11
Nup88-201ENSMUST00000035283 Apol9bQ8C7I4 310 aa14.39□□□□□ -0.11
Nup88-201ENSMUST00000035283 Actl9Q8CG27 415 aa14.39□□□□□ -0.11
Nup88-201ENSMUST00000035283 Mill1Q8HWE7 395 aa14.39□□□□□ -0.11
Nup88-201ENSMUST00000035283 Pop1Q8K205 1045 aa14.39□□□□□ -0.11
Nup88-201ENSMUST00000035283 Cplx3Q8R1B5 158 aa14.39□□□□□ -0.11
Nup88-201ENSMUST00000035283 Apol9aQ8VDU3 310 aa14.39□□□□□ -0.11
Nup88-201ENSMUST00000035283 Akt1s1Q9D1F4 257 aa14.39□□□□□ -0.11
Nup88-201ENSMUST00000035283 Ggt5Q9Z2A9 573 aa14.39□□□□□ -0.11
Nup88-201ENSMUST00000035283 Ptgdr2Q9Z2J6 382 aa14.39□□□□□ -0.11
Nup88-201ENSMUST00000035283 Mia3Q8BI84 1930 aa14.39□□□□□ -0.11
Nup88-201ENSMUST00000035283 1700018F24RikB2RW27 314 aa14.39□□□□□ -0.11
Nup88-201ENSMUST00000035283 FosP01101 380 aa14.39□□□□□ -0.11
Nup88-201ENSMUST00000035283 Fgfr1P16092 822 aa14.39□□□□□ -0.11
Nup88-201ENSMUST00000035283 Mybl2P48972 704 aa14.39□□□□□ -0.11
Nup88-201ENSMUST00000035283 Plk4Q64702 925 aa14.39□□□□□ -0.11
Nup88-201ENSMUST00000035283 Tmc8Q7TN58 722 aa14.39□□□□□ -0.11
Nup88-201ENSMUST00000035283 Cpa1Q7TPZ8 419 aa14.39□□□□□ -0.11
Nup88-201ENSMUST00000035283 Tmc4Q7TQ65 694 aa14.39□□□□□ -0.11
Nup88-201ENSMUST00000035283 Q80WR5 230 aa14.39□□□□□ -0.11
Nup88-201ENSMUST00000035283 Sh3rf3Q8C120 878 aa14.39□□□□□ -0.11
Nup88-201ENSMUST00000035283 Lin9Q8C735 542 aa14.39□□□□□ -0.11
Nup88-201ENSMUST00000035283 Shtn1Q8K2Q9 631 aa14.39□□□□□ -0.11
Nup88-201ENSMUST00000035283 SarnpQ9D1J3 210 aaKnown RBP14.39□□□□□ -0.11
Nup88-201ENSMUST00000035283 Rnf225Q9D7D1 332 aa14.39□□□□□ -0.11
Nup88-201ENSMUST00000035283 PycardQ9EPB4 193 aa14.39□□□□□ -0.11
Nup88-201ENSMUST00000035283 Col1a1P11087 1453 aa14.38□□□□□ -0.11
Nup88-201ENSMUST00000035283 Oip5A2AQ14 241 aa14.38□□□□□ -0.11
Nup88-201ENSMUST00000035283 6030498E09RikB1AX85 169 aa14.38□□□□□ -0.11
Nup88-201ENSMUST00000035283 Zfp839E9PUU5 921 aa14.38□□□□□ -0.11
Nup88-201ENSMUST00000035283 4933406M09RikG3XA12 479 aa14.38□□□□□ -0.11
Nup88-201ENSMUST00000035283 Usp17ldG5E8G2 545 aa14.38□□□□□ -0.11
Nup88-201ENSMUST00000035283 Usp17lcG5E8I7 545 aa14.38□□□□□ -0.11
Nup88-201ENSMUST00000035283 Atp2a2O55143 1044 aaKnown RBP14.38□□□□□ -0.11
Nup88-201ENSMUST00000035283 Aff1O88573 1216 aa14.38□□□□□ -0.11
Nup88-201ENSMUST00000035283 Calb1P12658 261 aa14.38□□□□□ -0.11
Nup88-201ENSMUST00000035283 Marcksl1P28667 200 aa14.38□□□□□ -0.11
Nup88-201ENSMUST00000035283 Syt2P46097 422 aa14.38□□□□□ -0.11
Nup88-201ENSMUST00000035283 Eef1dP57776 281 aaKnown RBP14.38□□□□□ -0.11
Nup88-201ENSMUST00000035283 Rcn1Q05186 325 aa14.38□□□□□ -0.11
Nup88-201ENSMUST00000035283 Pcsk7Q61139 770 aa14.38□□□□□ -0.11
Nup88-201ENSMUST00000035283 Kiaa1328Q6NZK5 612 aa14.38□□□□□ -0.11
Nup88-201ENSMUST00000035283 PicalmQ7M6Y3 660 aaKnown RBP14.38□□□□□ -0.11
Retrieved 100 of 22,080 RNA–protein pairs in 181.9 ms