RNA–Protein interactions for RNA: ENSMUST00000033158.5

Ubfd1-201, Transcript of Ubiquitin domain-containing protein UBFD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubfd1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1-201ENSMUST00000033158 Iqgap1Q9JKF1 1657 aaKnown RBP17.59■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Fam129cD3YZB0 591 aa17.59■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Apol11bE9PUZ0 337 aa17.59■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Stmn1P54227 149 aaKnown RBP17.59■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Mmp20P57748 482 aa17.59■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Creb3Q61817 404 aa17.59■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Cd180Q62192 661 aa17.59■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Nod1Q8BHB0 953 aa17.59■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Syne4Q8CII8 388 aa17.59■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 HnmtQ91VF2 295 aa17.59■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 FdpsQ920E5 353 aa17.59■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Atp2c2A7L9Z8 944 aa17.59■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Gm1758F6VZZ1 202 aa17.59■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Dsg3O35902 993 aa17.59■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Fgd3O88842 733 aa17.59■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Ccdc51Q3URS9 406 aa17.59■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Vipas39Q8BGQ1 491 aa17.59■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Zhx2Q8C0C0 836 aaKnown RBP17.59■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Bbs7Q8K2G4 715 aa17.59■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Zkscan3Q91VW9 553 aa17.59■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 TarsQ9D0R2 722 aaKnown RBP17.59■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Cyp39a1Q9JKJ9 470 aa17.59■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Rabgef1Q9JM13 491 aa17.59■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Nek3Q9R0A5 511 aa17.59■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 CpdO89001 1377 aa17.59■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 UrosP51163 265 aa17.59■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Wdr41Q3UDP0 460 aa17.59■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Tmem59lQ7TNI2 337 aa17.59■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Gpc5Q8CAL5 572 aa17.59■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Pnpt1Q8K1R3 783 aaKnown RBP17.59■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Arfip2Q8K221 341 aa17.59■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Anxa9Q9JHQ0 345 aa17.59■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Mst1rQ62190 1378 aa17.59■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 6030498E09RikB1AX85 169 aa17.59■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Gm3893E9Q1I1 302 aa17.59■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Adam7O35227 789 aa17.59■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 FancbQ5XJY6 703 aa17.59■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Svs3bQ8BZH8 265 aa17.59■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Adrm1Q9JKV1 407 aa17.59■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Aox3G3X982 1335 aa17.58■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Mars2Q499X9 586 aaKnown RBP17.58■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Tmem232Q5K6N0 675 aa17.58■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Ipo11Q8K2V6 975 aa17.58■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 ArcQ9WV31 396 aa17.58■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Rasgrp1Q9Z1S3 795 aa17.58■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Gm6588E9Q3K0 461 aa17.58■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Prl3b1P09586 222 aa17.58■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Unc45bQ8CGY6 931 aaKnown RBP17.58■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Rassf7Q9DD19 359 aa17.58■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Shcbp1Q9Z179 668 aa17.58■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Gm3402K7N5P2 326 aa17.58■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Ptgs2Q05769 604 aa17.58■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Q3TQQ9 903 aa17.58■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Hipk4Q3V016 616 aa17.58■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Ube3cQ80U95 1083 aa17.58■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Ece2Q80Z60 881 aa17.58■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 PapolbQ9WVP6 641 aa17.58■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Mucl2P02815 138 aa17.58■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Cdo1P60334 200 aa17.58■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Gbp10Q000W5 611 aa17.58■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Rpusd2Q149F1 553 aa17.58■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Sec23ipQ6NZC7 998 aa17.58■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Skida1Q80YR3 822 aa17.58■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Phka2Q8BWJ3 1235 aa17.58■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Proser2Q8C5R2 471 aa17.58■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Nudcd3Q8R1N4 363 aa17.58■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Rgs3Q9DC04 966 aa17.58■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Tbx18Q9EPZ6 613 aa17.58■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Klra17Q9JMA4 273 aa17.58■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Tecpr2Q3UH45 1423 aa17.57■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Ak9G3UYQ4 1894 aa17.57■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Nlrp1bA1Z198 1177 aa17.57■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Nfe2Q07279 373 aa17.57■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Rasip1Q3U0S6 961 aa17.57■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Satb1Q60611 764 aa17.57■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Pdia6Q922R8 440 aaKnown RBP17.57■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Dhx30Q99PU8 1217 aaKnown RBP17.57■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Setd6Q9CWY3 473 aa17.57■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 DtnaQ9D2N4 746 aa17.57■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Pdcd7Q9WTY1 482 aa17.57■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Plekhg4A0A1L1SU27 1217 aa17.57■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 1700122O11RikJ3QPW6 241 aa17.57■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Atxn10P28658 475 aa17.57■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Grin1P35438 938 aa17.57■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Foxp2P58463 714 aa17.57■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 PrkcbP68404 671 aa17.57■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Gdf10P97737 476 aa17.57■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Arhgap15Q811M1 481 aa17.57■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Reep2Q8VCD6 254 aa17.57■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Rnaseh2aQ9CWY8 301 aa17.57■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Cep170bQ80U49 1574 aa17.57■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Pramel3A2AHA7 463 aa17.57■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Gm7903A2AWL1 463 aa17.57■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 AV320801A2AWL3 467 aa17.57■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Cyp2c69E9PXC3 491 aa17.57■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Gm15023L7MUB4 467 aa17.57■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Cyp2c40P56657 491 aa17.57■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Oog4Q4G0C7 502 aa17.57■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Mcf2lQ64096 1149 aa17.57■□□□□ 0.4
Ubfd1-201ENSMUST00000033158 Nudt16Q6P3D0 195 aa17.57■□□□□ 0.4
Retrieved 100 of 22,080 RNA–protein pairs in 26.2 ms