RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 Slc40a1Q9JHI9 570 aa9.07□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Arih1Q9Z1K5 555 aa9.07□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Peak1Q69Z38 1735 aa9.07□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Foxn2E9Q7L6 429 aa9.07□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Mmp15O54732 657 aa9.07□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Alkbh1P0CB42 389 aa9.07□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Rnpc3Q3UZ01 514 aaKnown RBP9.07□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 DcakdQ8BHC4 231 aaKnown RBP9.07□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Tsc1Q9EP53 1161 aa9.07□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 SerhlQ9EPB5 311 aa9.07□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Gkap1Q9JMB0 366 aa9.07□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Stat2Q9WVL2 923 aa9.07□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Twf2Q9Z0P5 349 aaKnown RBP9.07□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Gm5936A2BG95 728 aa9.07□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Gm5640A3KG49 728 aa9.07□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Gtpbp6Q3U6U5 514 aa9.07□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Syne3Q4FZC9 975 aa9.07□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Ezh2Q61188 746 aaKnown RBP9.07□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Elac2Q80Y81 831 aaKnown RBP9.07□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Dennd2aQ8C4S8 1000 aa9.07□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Taf1dQ9D4V4 322 aa9.07□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Gtf2h1Q9DBA9 547 aa9.07□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Actr2P61161 394 aa9.07□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Rtel1Q0VGM9 1203 aa9.07□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Mpp4Q6P7F1 635 aa9.07□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 SugctQ7TNE1 436 aa9.07□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Crybg3Q80W49 1005 aa9.07□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 4921504E06RikQ8CET2 560 aa9.07□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Castor1Q9CWQ8 331 aa9.07□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Cpb2Q9JHH6 422 aa9.07□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Cacna2d3Q9Z1L5 1091 aa9.07□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Ltbp1Q8CG19 1712 aa9.07□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Plcg1Q62077 1302 aa9.07□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Col1a1P11087 1453 aa9.07□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Vmn2r63E9Q0K5 859 aa9.07□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Gm9268E9Q0M3 861 aa9.07□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Vmn2r62K7N712 859 aa9.07□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Eftud2O08810 971 aaKnown RBP9.07□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Xirp1O70373 1129 aa9.07□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Fam193bQ3U2K0 892 aa9.07□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Odr4Q4PJX1 447 aa9.07□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 PighQ5M9N4 188 aa9.07□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Antxr2Q6DFX2 487 aa9.07□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Daam2Q80U19 1115 aa9.07□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 PolrmtQ8BKF1 1207 aaKnown RBP9.07□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Q8BWG4 1187 aa9.07□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Slc9a9Q8BZ00 644 aa9.07□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Phc3Q8CHP6 981 aa9.07□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Ube2q2Q8K2Z8 378 aa9.07□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Foxp3Q99JB6 429 aa9.07□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Nfatc2ipO09130 412 aa9.06□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Tspyl1O88852 379 aa9.06□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Rasgrf1P27671 1262 aa9.06□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Kiaa1328Q6NZK5 612 aa9.06□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Slc38a7Q8BWH0 463 aa9.06□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Pcdha9Q91Y11 979 aa9.06□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 4921530L21RikQ9CQ47 274 aa9.06□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Ankef1Q9D2J7 775 aa9.06□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Ppil2Q9D787 521 aa9.06□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Magea6O89010 325 aa9.06□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 LeprP48356 1162 aa9.06□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Trappc3lQ4KL14 181 aa9.06□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Acot5Q6Q2Z6 421 aa9.06□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Tcp10aQ80W76 438 aa9.06□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Rhot1Q8BG51 631 aa9.06□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 3830417A13RikQ8BQJ2 303 aa9.06□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Ppm1kQ8BXN7 372 aa9.06□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Rapgef5Q8C0Q9 814 aa9.06□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Snx24Q9CRB0 169 aa9.06□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Zcchc17Q9ESX4 241 aaKnown RBP9.06□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Scgb2b20Q9JI02 112 aa9.06□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Gm13084A2A8N0 494 aa9.06□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Capn2O08529 700 aa9.06□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Pja1O55176 578 aa9.06□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Krt35Q497I4 455 aa9.06□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Stip1Q60864 543 aaKnown RBP9.06□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Rpf1Q7TND5 349 aaKnown RBP9.06□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 MgarpQ8VI64 283 aa9.06□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Alg1Q921Q3 482 aa9.06□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Dgcr8Q9EQM6 773 aa9.06□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Fam81bA0A140LI28 432 aa9.06□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Akr1b8P45377 316 aa9.06□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 PhbP67778 272 aaKnown RBP9.06□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Smyd5Q3TYX3 416 aa9.06□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Slc10a4Q3UEZ8 437 aa9.06□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Upf3bQ3ULL6 472 aa9.06□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Oog3Q3UWY1 500 aa9.06□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 FntaQ61239 377 aa9.06□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Dsg1aQ61495 1057 aa9.06□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Ahcyl2Q68FL4 613 aaKnown RBP9.06□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Cyfip1Q7TMB8 1253 aa9.06□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Vwa5aQ99KC8 793 aaKnown RBP9.06□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Nova2D3YVV7 556 aaKnown RBP9.06□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Myo1eE9Q634 1107 aa9.06□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Gm1661E9Q963 441 aa9.06□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Nptx2O70340 429 aa9.06□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 MlxipQ2VPU4 917 aa9.06□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Rnf139Q7TMV1 668 aa9.06□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Rtn3Q9ES97 964 aa9.06□□□□□ -0.96
Sf3b1-201ENSMUST00000027127 Lrrc63A6H694 637 aa9.05□□□□□ -0.96
Retrieved 100 of 22,080 RNA–protein pairs in 24.5 ms