RNA–Protein interactions for RNA: ENSMUST00000026740.5

Col7a1-201, Transcript of Collagen alpha-1(VII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col7a1, Length 9,198 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1-201ENSMUST00000026740 Cpb2Q9JHH6 422 aa15.23■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Tmem179Q8BHH9 233 aa15.23■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Dpp9Q8BVG4 862 aa15.23■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Usp44Q8C2S0 711 aa15.23■□□□□ 0.03
Col7a1-201ENSMUST00000026740 DcpsQ9DAR7 338 aa15.23■□□□□ 0.03
Col7a1-201ENSMUST00000026740 PodxlQ9R0M4 503 aa15.23■□□□□ 0.03
Col7a1-201ENSMUST00000026740 CoblQ5NBX1 1337 aaKnown RBP15.23■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Copb2O55029 905 aa15.23■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Runx2Q08775 607 aa15.23■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Tfcp2l1Q3UNW5 479 aa15.23■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Gm10392Q3V3I3 114 aa15.23■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Hat1Q8BY71 416 aa15.23■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Scrn2Q8VCA8 425 aa15.23■□□□□ 0.03
Col7a1-201ENSMUST00000026740 AU022751B1B0V2 589 aa15.23■□□□□ 0.03
Col7a1-201ENSMUST00000026740 RalaP63321 206 aa15.23■□□□□ 0.03
Col7a1-201ENSMUST00000026740 S100a13P97352 98 aa15.23■□□□□ 0.03
Col7a1-201ENSMUST00000026740 PrlrQ08501 608 aa15.23■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Ifnl2Q4VK74 193 aa15.23■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Chmp2bQ8BJF9 213 aa15.23■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Pum3Q8BKS9 647 aaKnown RBP15.23■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Ace3D0G895 737 aa15.22■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Pcdhb9E9Q5G2 828 aa15.22■□□□□ 0.03
Col7a1-201ENSMUST00000026740 PtpreP49446 699 aa15.22■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Vmn1r191Q8K4D0 298 aa15.22■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Ino80bQ99PT3 375 aaKnown RBP15.22■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Chek2Q9Z265 546 aa15.22■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Myh2G3UW82 1942 aa15.22■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Myh1Q5SX40 1942 aa15.22■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Ppargc1aO70343 797 aa15.22■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Kpnb1P70168 876 aaKnown RBP15.22■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Stxbp2Q64324 593 aa15.22■□□□□ 0.03
Col7a1-201ENSMUST00000026740 ClmnQ8C5W0 1052 aa15.22■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Btbd6Q8K2J9 488 aa15.22■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Top3bQ9Z321 862 aaKnown RBP15.22■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Vti1bO88384 232 aa15.22■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Ptgs2Q05769 604 aa15.22■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Arhgap15Q811M1 481 aa15.22■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Clic6Q8BHB9 596 aa15.22■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Appl1Q8K3H0 707 aa15.22■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Kif19Q99PT9 997 aa15.22■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Fthl17aQ9DAX0 182 aa15.22■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Rbp7Q9EPC5 134 aa15.22■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Vmn2r79E9Q067 851 aa15.22■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Eno1P17182 434 aaKnown RBP15.22■□□□□ 0.03
Col7a1-201ENSMUST00000026740 KynuQ9CXF0 464 aa15.22■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Ilf2Q9CXY6 390 aaKnown RBP15.22■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Ces1bD3Z5G7 567 aa15.22■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Ifnb1P01575 182 aa15.22■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Foxred2Q3USW5 665 aa15.22■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Krt73Q6NXH9 539 aa15.22■□□□□ 0.03
Col7a1-201ENSMUST00000026740 HltfQ6PCN7 1003 aa15.22■□□□□ 0.03
Col7a1-201ENSMUST00000026740 AdalQ80SY6 360 aa15.22■□□□□ 0.03
Col7a1-201ENSMUST00000026740 ParvaQ9EPC1 372 aa15.22■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Pidd1Q9ERV7 915 aa15.22■□□□□ 0.03
Col7a1-201ENSMUST00000026740 MypnQ5DTJ9 1315 aa15.22■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Rabgap1lA6H6A9 815 aa15.22■□□□□ 0.03
Col7a1-201ENSMUST00000026740 CalcaP70160 136 aa15.22■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Gucy2cQ3UWA6 1072 aa15.22■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Ankrd13cQ3UX43 541 aa15.22■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Rbm12b1Q80YR9 836 aaKnown RBP15.22■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Galnt5Q8C102 930 aa15.22■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Nckap1lQ8K1X4 1134 aa15.22■□□□□ 0.03
Col7a1-201ENSMUST00000026740 PtsQ9R1Z7 144 aa15.22■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Olfr310B2RVZ1 332 aa15.22■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Zfp277E9Q6D6 583 aaKnown RBP15.22■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Ifi206G3UZV2 921 aa15.22■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Capza2P47754 286 aa15.22■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Trim56Q80VI1 734 aaKnown RBP15.22■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Tasp1Q8R1G1 420 aa15.22■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Nr2e3Q9QXZ7 395 aa15.22■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Rnf4Q9QZS2 194 aa15.22■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Baz2bA2AUY4 2123 aa15.22■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Fam47eD3YWC7 402 aa15.21■□□□□ 0.03
Col7a1-201ENSMUST00000026740 InhbeO08717 350 aa15.21■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Olfm1O88998 485 aa15.21■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Ap1m1P35585 423 aa15.21■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Eif4a1P60843 406 aaKnown RBP15.21■□□□□ 0.03
Col7a1-201ENSMUST00000026740 4930430A15RikQ05AC5 485 aa15.21■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Scnn1aQ61180 699 aa15.21■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Xlr3cQ61806 226 aa15.21■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Lrrc8eQ66JT1 795 aa15.21■□□□□ 0.03
Col7a1-201ENSMUST00000026740 EtfbQ9DCW4 255 aaKnown RBP15.21■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Hsd17b4P51660 735 aaKnown RBP15.21■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Morc2bQ8C5W4 1022 aa15.21■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Wdsub1Q9D0I6 474 aa15.21■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Ehd4Q9EQP2 541 aa15.21■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Ttc38A3KMP2 465 aa15.21■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Gm44G3UW88 330 aa15.21■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Sec24cG3X972 1096 aaKnown RBP15.21■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Il1rapl1P59823 695 aa15.21■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Dpcr1Q3TNW5 500 aa15.21■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Snx16Q8C080 344 aa15.21■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Lsm14bQ8CGC4 385 aaKnown RBP15.21■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Trim13Q9CYB0 407 aa15.21■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Rbm6S4R1W5 1118 aaKnown RBP15.21■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Vstm4T1NXB5 319 aa15.21■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Kat6bQ8BRB7 1872 aa15.21■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Chd4Q6PDQ2 1915 aaKnown RBP15.21■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Rnf17Q99MV7 1640 aa15.21■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Rgl1Q60695 768 aa15.21■□□□□ 0.03
Retrieved 100 of 22,080 RNA–protein pairs in 33.3 ms