RNA–Protein interactions for RNA: ENSMUST00000023352.8

Prkdc-201, Transcript of DNA-dependent protein kinase catalytic subunit, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prkdc, Length 12,647 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prkdc-201ENSMUST00000023352 Atp4aQ64436 1033 aa4.83□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Lrig3Q6P1C6 1117 aa4.83□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Chn2Q80XD1 332 aa4.83□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Nod2Q8K3Z0 1020 aa4.83□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Ascc2Q91WR3 749 aa4.83□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Tmem206Q9D771 350 aa4.83□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Ropn1Q9ESG2 212 aa4.83□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Grin2dQ03391 1323 aa4.83□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Mtcl1Q3UHU5 1945 aa4.83□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Slfn8B1ARD8 910 aa4.83□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Tekt5G5E8A8 557 aa4.83□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Snap23O09044 210 aa4.83□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Q5EBG8 199 aa4.83□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Gpsm2Q8VDU0 679 aa4.83□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Cdca5Q9CPY3 264 aa4.83□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Mcm8Q9CWV1 833 aa4.83□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Spag6Q9JLI7 507 aa4.83□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Samd15F6XZJ7 620 aa4.83□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Mfsd4b4J3QNS5 503 aa4.83□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Gjc1P28229 396 aa4.83□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Gjb6P70689 261 aa4.83□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Atp1b3P97370 278 aa4.83□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Gas7Q60780 421 aa4.83□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Fastkd1Q6DI86 829 aa4.83□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Fam185aQ7TPD2 378 aa4.83□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Supt20hQ7TT00 530 aaKnown RBP4.83□□□□□ -1.64
Prkdc-201ENSMUST00000023352 MlklQ9D2Y4 472 aa4.83□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Gm7995L7N2E4 160 aa4.83□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Ppp4cP97470 307 aa4.83□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Spata18Q0P557 537 aa4.83□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Nxf7Q80SZ6 620 aaKnown RBP4.83□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Myl6bQ8CI43 207 aa4.83□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Kiaa1024Q8K3V7 917 aa4.83□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Snf8Q9CZ28 258 aa4.83□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Eid1Q9DCR4 169 aa4.83□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Plod1Q9R0E2 728 aa4.83□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Veph1A1A535 833 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Mms22lB1AUR6 1238 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Cyp11b2P15539 500 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Pax3P24610 479 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Eps8Q08509 821 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Asap3Q5U464 904 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Abi1Q8CBW3 481 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Snrnp27Q8K194 155 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Net1Q9Z206 595 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Dlg5E9Q9R9 1921 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Arhgef16Q3U5C8 713 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Myo1dQ5SYD0 1006 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Sdf4Q61112 361 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Irak1Q62406 710 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 3830417A13RikQ8BQJ2 303 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 NcaphQ8C156 731 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Ppp6r2Q8R3Q2 923 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Dach2Q925Q8 634 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Capn9Q9D805 690 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 PigbQ9JJQ0 542 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Atp6v1c1Q9Z1G3 382 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Usp4P35123 962 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Polr1bP70700 1135 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Rnf207Q3V3A7 635 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Syce2Q505B8 171 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Syce1lQ5D525 247 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Kctd16Q5DTY9 427 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Arl8aQ8VEH3 186 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Myo1hQ9D6A1 958 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Kcnd2Q9Z0V2 630 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Arhgef10lA2AWP8 1280 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Pdzd8B9EJ80 1147 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Nova2D3YVV7 556 aaKnown RBP4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Gm4312K9J7E2 289 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Sycp3P70281 254 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Mcf2lQ64096 1149 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Plk4Q64702 925 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 GartQ64737 1010 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Pank4Q80YV4 820 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Sptlc3Q8BG54 563 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Olfml3Q8BK62 406 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Trip10Q8CJ53 603 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Edc3Q8K2D3 508 aaKnown RBP4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Igf2bp3Q9CPN8 579 aaKnown RBP4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 CinpQ9D0V8 212 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 4921524L21RikQ9D5T2 438 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Nr2e3Q9QXZ7 395 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Slc12a7Q9WVL3 1083 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Gm382B1AXN3 1250 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Vmn2r78K7N6U5 853 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Xrcc5P27641 732 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Ezh1P70351 747 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Asprv1Q09PK2 339 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Rrp36Q3UFY0 244 aaKnown RBP4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Spdye4aQ5IBH6 268 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Zbtb7bQ64321 544 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Gtf3c4Q8BMQ2 817 aaKnown RBP4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Spire2Q8K1S6 718 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Mtss1Q8R1S4 759 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 BrdtQ91Y44 956 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Dnajc14Q921R4 703 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Pdia6Q922R8 440 aaKnown RBP4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Rgs9O54828 675 aa4.82□□□□□ -1.64
Prkdc-201ENSMUST00000023352 Rab20P35295 233 aa4.82□□□□□ -1.64
Retrieved 100 of 22,080 RNA–protein pairs in 22 ms