RNA–Protein interactions for RNA: YPL253C

VIK1, Transcript of Protein that forms a kinesin-14 heterodimeric motor with Kar3p, yeast

Gene VIK1, Length 1,944 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VIK1	YPL253C	MEI5	P32489	222 aa		0.48	□□□□□ -2.33
VIK1	YPL253C	MYO3	P36006	1272 aa		0.48	□□□□□ -2.33
VIK1	YPL253C	GPX1	P36014	167 aa		0.48	□□□□□ -2.33
VIK1	YPL253C	LRP1	P38801	184 aa	Known RBP	0.48	□□□□□ -2.33
VIK1	YPL253C	YIL089W	P40500	205 aa		0.48	□□□□□ -2.33
VIK1	YPL253C	YML6	P51998	286 aa		0.48	□□□□□ -2.33
VIK1	YPL253C	FCF1	Q05498	189 aa	Predicted RBP	0.48	□□□□□ -2.33
VIK1	YPL253C	NNT1	Q05874	261 aa		0.48	□□□□□ -2.33
VIK1	YPL253C	YLR012C	Q07927	99 aa		0.48	□□□□□ -2.33
VIK1	YPL253C	PAR32	Q12515	295 aa	Known RBP	0.48	□□□□□ -2.33
VIK1	YPL253C	TDH1	P00360	332 aa	Known RBP	0.48	□□□□□ -2.33
VIK1	YPL253C	GAL7	P08431	366 aa		0.48	□□□□□ -2.33
VIK1	YPL253C	CIN8	P27895	1000 aa		0.48	□□□□□ -2.33
VIK1	YPL253C	MDL1	P33310	695 aa		0.48	□□□□□ -2.33
VIK1	YPL253C	PXA2	P34230	853 aa		0.48	□□□□□ -2.33
VIK1	YPL253C	MBA1	P38300	278 aa		0.48	□□□□□ -2.33
VIK1	YPL253C	YJL055W	P47044	245 aa		0.48	□□□□□ -2.33
VIK1	YPL253C	OST3	P48439	350 aa		0.48	□□□□□ -2.33
VIK1	YPL253C	UTP6	Q02354	440 aa	Known RBP	0.48	□□□□□ -2.33
VIK1	YPL253C	TVP15	Q03860	143 aa		0.48	□□□□□ -2.33
VIK1	YPL253C	RPL6B	P05739	176 aa	Known RBP	0.47	□□□□□ -2.33
VIK1	YPL253C	UBA1	P22515	1024 aa	Known RBP	0.47	□□□□□ -2.33
VIK1	YPL253C	YCR025C	P25352	136 aa		0.47	□□□□□ -2.33
VIK1	YPL253C	YSW1	P38280	609 aa		0.47	□□□□□ -2.33
VIK1	YPL253C	SPL2	P38839	148 aa		0.47	□□□□□ -2.33
VIK1	YPL253C	MRPL49	P40858	161 aa	Predicted RBP	0.47	□□□□□ -2.33
VIK1	YPL253C	VPS9	P54787	451 aa		0.47	□□□□□ -2.33
VIK1	YPL253C	RPL6A	Q02326	176 aa	Known RBP	0.47	□□□□□ -2.33
VIK1	YPL253C	YOR268C	Q08734	132 aa		0.47	□□□□□ -2.33
VIK1	YPL253C	YPL278C	Q08990	100 aa		0.47	□□□□□ -2.33
VIK1	YPL253C	HSP82	P02829	709 aa	Known RBP	0.46	□□□□□ -2.34
VIK1	YPL253C	ERD1	P16151	362 aa		0.46	□□□□□ -2.34
VIK1	YPL253C	RBK1	P25332	333 aa		0.46	□□□□□ -2.34
VIK1	YPL253C	GCG1	P32656	232 aa	Known RBP	0.46	□□□□□ -2.34
VIK1	YPL253C	YOR062C	P36025	268 aa		0.46	□□□□□ -2.34
VIK1	YPL253C	SUR2	P38992	349 aa		0.46	□□□□□ -2.34
VIK1	YPL253C	GDI1	P39958	451 aa	Known RBP	0.46	□□□□□ -2.34
VIK1	YPL253C	YIL012W	P40551	113 aa		0.46	□□□□□ -2.34
VIK1	YPL253C	PRP24	P49960	444 aa	Known RBP	0.46	□□□□□ -2.34
VIK1	YPL253C	PXR1	P53335	271 aa	Predicted RBP	0.46	□□□□□ -2.34
VIK1	YPL253C	YDL144C	Q07589	356 aa		0.46	□□□□□ -2.34
VIK1	YPL253C	ATG5	Q12380	294 aa		0.46	□□□□□ -2.34
VIK1	YPL253C	FRE6	Q12473	712 aa		0.46	□□□□□ -2.34
VIK1	YPL253C	BOL1	Q3E793	110 aa		0.46	□□□□□ -2.34
VIK1	YPL253C	POT1	P27796	417 aa	Known RBP RIP-Chip data	0.46	□□□□□ -2.34	not detected
VIK1	YPL253C	CDC13	P32797	924 aa	Known RBP	0.46	□□□□□ -2.34
VIK1	YPL253C	MRPL3	P36516	390 aa		0.46	□□□□□ -2.34
VIK1	YPL253C	ADH5	P38113	351 aa	Known RBP	0.46	□□□□□ -2.34
VIK1	YPL253C	RXT2	P38255	430 aa		0.46	□□□□□ -2.34
VIK1	YPL253C	SOP4	P39543	234 aa	Predicted RBP	0.46	□□□□□ -2.34
VIK1	YPL253C	AVT6	P40074	448 aa		0.46	□□□□□ -2.34
VIK1	YPL253C	COG3	P40094	801 aa		0.46	□□□□□ -2.34
VIK1	YPL253C	AYR1	P40471	297 aa		0.46	□□□□□ -2.34
VIK1	YPL253C	UTP25	P40498	721 aa	Known RBP	0.46	□□□□□ -2.34
VIK1	YPL253C	SEC28	P40509	296 aa	Known RBP	0.46	□□□□□ -2.34
VIK1	YPL253C	TAF6	P53040	516 aa		0.46	□□□□□ -2.34
VIK1	YPL253C	TPN1	P53099	579 aa		0.46	□□□□□ -2.34
VIK1	YPL253C	CAB4	P53332	305 aa		0.46	□□□□□ -2.34
VIK1	YPL253C	TFB5	Q3E7C1	72 aa	Predicted RBP	0.46	□□□□□ -2.34
VIK1	YPL253C	STE3	P06783	470 aa		0.45	□□□□□ -2.34
VIK1	YPL253C	YCR102C	P25608	368 aa		0.45	□□□□□ -2.34
VIK1	YPL253C	RDS1	P25611	832 aa		0.45	□□□□□ -2.34
VIK1	YPL253C	LAS1	P36146	502 aa	Predicted RBP	0.45	□□□□□ -2.34
VIK1	YPL253C	YBR062C	P38239	180 aa		0.45	□□□□□ -2.34
VIK1	YPL253C	BTT1	P40314	149 aa	Predicted RBP	0.45	□□□□□ -2.34
VIK1	YPL253C	JEM1	P40358	645 aa		0.45	□□□□□ -2.34
VIK1	YPL253C	INM2	Q05533	292 aa		0.45	□□□□□ -2.34
VIK1	YPL253C	PML1	Q07930	204 aa	Predicted RBP	0.45	□□□□□ -2.34
VIK1	YPL253C	NFI1	Q12216	726 aa		0.45	□□□□□ -2.34
VIK1	YPL253C	LAG2	Q92325	660 aa		0.45	□□□□□ -2.34
VIK1	YPL253C	RGS2	Q99188	309 aa		0.45	□□□□□ -2.34
VIK1	YPL253C	RAD10	P06838	210 aa		0.44	□□□□□ -2.34
VIK1	YPL253C	YLL053C	P0CD98	152 aa		0.44	□□□□□ -2.34
VIK1	YPL253C	HXT2	P23585	541 aa		0.44	□□□□□ -2.34
VIK1	YPL253C	GDT1	P38301	280 aa	Predicted RBP	0.44	□□□□□ -2.34
VIK1	YPL253C	NAS2	P40555	220 aa		0.44	□□□□□ -2.34
VIK1	YPL253C	YNL143C	P53908	130 aa		0.44	□□□□□ -2.34
VIK1	YPL253C	YPL247C	Q12523	523 aa		0.44	□□□□□ -2.34
VIK1	YPL253C	IMP1	P28627	190 aa		0.44	□□□□□ -2.34
VIK1	YPL253C	PUP2	P32379	260 aa		0.44	□□□□□ -2.34
VIK1	YPL253C	SIF2	P38262	535 aa		0.44	□□□□□ -2.34
VIK1	YPL253C	YFL040W	P43562	540 aa		0.44	□□□□□ -2.34
VIK1	YPL253C	YJL016W	P47072	561 aa		0.44	□□□□□ -2.34
VIK1	YPL253C	SXM1	Q04175	944 aa	Known RBP	0.44	□□□□□ -2.34
VIK1	YPL253C	YDR286C	Q05530	114 aa		0.44	□□□□□ -2.34
VIK1	YPL253C	PSY3	Q12318	242 aa		0.44	□□□□□ -2.34
VIK1	YPL253C	SKS1	Q12505	502 aa		0.44	□□□□□ -2.34
VIK1	YPL253C	PAN1	P32521	1480 aa		0.44	□□□□□ -2.34
VIK1	YPL253C	ACB1	P31787	87 aa		0.43	□□□□□ -2.34
VIK1	YPL253C	VPH1	P32563	840 aa	Known RBP	0.43	□□□□□ -2.34
VIK1	YPL253C	DAD2	P36162	133 aa		0.43	□□□□□ -2.34
VIK1	YPL253C	CUE3	P53137	624 aa	Known RBP	0.43	□□□□□ -2.34
VIK1	YPL253C	YLR446W	Q06204	433 aa		0.43	□□□□□ -2.34
VIK1	YPL253C	DBP9	Q06218	594 aa	Known RBP	0.43	□□□□□ -2.34
VIK1	YPL253C	TOM40	P23644	387 aa	Known RBP	0.42	□□□□□ -2.34
VIK1	YPL253C	IFM1	P25038	676 aa		0.42	□□□□□ -2.34
VIK1	YPL253C	ATG15	P25641	520 aa		0.42	□□□□□ -2.34
VIK1	YPL253C	SWI3	P32591	825 aa		0.42	□□□□□ -2.34
VIK1	YPL253C	YHL026C	P38740	315 aa		0.42	□□□□□ -2.34
VIK1	YPL253C	APE4	P38821	490 aa		0.42	□□□□□ -2.34

Retrieved 100 of 5,963 RNA–protein pairs in 18.2 ms