RNA–Protein interactions for RNA: YPL115C

BEM3, Transcript of Rho GTPase activating protein (RhoGAP), yeast

Gene BEM3, Length 3,387 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BEM3	YPL115C	CUP1-1	P0CX80	61 aa		0.47	□□□□□ -2.33
BEM3	YPL115C	CUP1-2	P0CX81	61 aa		0.47	□□□□□ -2.33
BEM3	YPL115C	HMX1	P32339	317 aa		0.47	□□□□□ -2.33
BEM3	YPL115C	YBL081W	P38180	368 aa	Known RBP	0.47	□□□□□ -2.33
BEM3	YPL115C	PET8	P38921	284 aa		0.47	□□□□□ -2.33
BEM3	YPL115C	RRT13	P40042	185 aa		0.47	□□□□□ -2.33
BEM3	YPL115C	MLC1	P53141	149 aa		0.47	□□□□□ -2.33
BEM3	YPL115C	LST7	P53237	242 aa		0.47	□□□□□ -2.33
BEM3	YPL115C	ALG11	P53954	548 aa	Known RBP	0.47	□□□□□ -2.33
BEM3	YPL115C	MRS2	Q01926	470 aa		0.47	□□□□□ -2.33
BEM3	YPL115C	CSM3	Q04659	317 aa		0.47	□□□□□ -2.33
BEM3	YPL115C	MRX8	Q05473	314 aa		0.47	□□□□□ -2.33
BEM3	YPL115C	UBA3	Q99344	299 aa		0.47	□□□□□ -2.33
BEM3	YPL115C	MKK1	P32490	508 aa		0.47	□□□□□ -2.33
BEM3	YPL115C	GPI18	P38211	433 aa		0.47	□□□□□ -2.33
BEM3	YPL115C	YBR062C	P38239	180 aa		0.47	□□□□□ -2.33
BEM3	YPL115C	YJL144W	P47009	104 aa		0.47	□□□□□ -2.33
BEM3	YPL115C	MPP6	P53725	186 aa	Predicted RBP	0.47	□□□□□ -2.33
BEM3	YPL115C	URC2	Q04411	772 aa		0.47	□□□□□ -2.33
BEM3	YPL115C	ASR1	Q06834	288 aa		0.47	□□□□□ -2.33
BEM3	YPL115C	YFH1	Q07540	174 aa		0.47	□□□□□ -2.33
BEM3	YPL115C	ATP16	Q12165	160 aa		0.47	□□□□□ -2.33
BEM3	YPL115C	UTP23	Q12339	254 aa	Known RBP	0.47	□□□□□ -2.33
BEM3	YPL115C	TEL1	P38110	2787 aa		0.47	□□□□□ -2.33
BEM3	YPL115C	RPS18A	P0CX55	146 aa	Known RBP	0.46	□□□□□ -2.34
BEM3	YPL115C	RPS18B	P0CX56	146 aa	Predicted RBP	0.46	□□□□□ -2.34
BEM3	YPL115C	VMA5	P31412	392 aa	Known RBP	0.46	□□□□□ -2.34
BEM3	YPL115C	COT1	P32798	439 aa		0.46	□□□□□ -2.34
BEM3	YPL115C	RIB7	P33312	244 aa		0.46	□□□□□ -2.34
BEM3	YPL115C	SPO23	P33757	523 aa		0.46	□□□□□ -2.34
BEM3	YPL115C	SKT5	P34226	696 aa		0.46	□□□□□ -2.34
BEM3	YPL115C	KTI12	P34253	313 aa	Known RBP	0.46	□□□□□ -2.34
BEM3	YPL115C	TAE1	P38340	232 aa		0.46	□□□□□ -2.34
BEM3	YPL115C	RTT105	P40063	208 aa		0.46	□□□□□ -2.34
BEM3	YPL115C	RIB4	P50861	169 aa	Predicted RBP	0.46	□□□□□ -2.34
BEM3	YPL115C	GTO3	Q04806	366 aa		0.46	□□□□□ -2.34
BEM3	YPL115C	PEX10	Q05568	337 aa		0.46	□□□□□ -2.34
BEM3	YPL115C	YPR078C	Q06813	372 aa		0.46	□□□□□ -2.34
BEM3	YPL115C	YDL114W	Q07530	308 aa		0.46	□□□□□ -2.34
BEM3	YPL115C	GCN1	P33892	2672 aa	Known RBP	0.46	□□□□□ -2.34
BEM3	YPL115C	DRS2	P39524	1355 aa		0.46	□□□□□ -2.34
BEM3	YPL115C	NUP157	P40064	1391 aa	Known RBP	0.46	□□□□□ -2.34
BEM3	YPL115C	SSK22	P25390	1331 aa	Predicted RBP	0.46	□□□□□ -2.34
BEM3	YPL115C	CDC37	P06101	506 aa	Known RBP	0.46	□□□□□ -2.34
BEM3	YPL115C	RAD1	P06777	1100 aa		0.46	□□□□□ -2.34
BEM3	YPL115C	RPS23A	P0CX29	145 aa	Known RBP	0.46	□□□□□ -2.34
BEM3	YPL115C	RPS23B	P0CX30	145 aa		0.46	□□□□□ -2.34
BEM3	YPL115C	RPS16A	P0CX51	143 aa	Known RBP	0.46	□□□□□ -2.34
BEM3	YPL115C	RPS16B	P0CX52	143 aa	Known RBP	0.46	□□□□□ -2.34
BEM3	YPL115C	MRP1	P10662	321 aa	Known RBP	0.46	□□□□□ -2.34
BEM3	YPL115C	RNA1	P11745	407 aa	Known RBP	0.46	□□□□□ -2.34
BEM3	YPL115C	RPB9	P27999	122 aa		0.46	□□□□□ -2.34
BEM3	YPL115C	RPS0A	P32905	252 aa	Known RBP	0.46	□□□□□ -2.34
BEM3	YPL115C	MRPL40	P36534	297 aa		0.46	□□□□□ -2.34
BEM3	YPL115C	MOB2	P43563	287 aa		0.46	□□□□□ -2.34
BEM3	YPL115C	AIM23	P47015	356 aa		0.46	□□□□□ -2.34
BEM3	YPL115C	SHE4	P51534	789 aa		0.46	□□□□□ -2.34
BEM3	YPL115C	MND1	P53102	219 aa		0.46	□□□□□ -2.34
BEM3	YPL115C	DBP6	P53734	629 aa	Known RBP	0.46	□□□□□ -2.34
BEM3	YPL115C	YMR209C	Q03648	457 aa		0.46	□□□□□ -2.34
BEM3	YPL115C	OST6	Q03723	332 aa		0.46	□□□□□ -2.34
BEM3	YPL115C	TRM82	Q03774	444 aa		0.46	□□□□□ -2.34
BEM3	YPL115C	ARC18	Q05933	178 aa	Known RBP	0.46	□□□□□ -2.34
BEM3	YPL115C	SLM3	Q12093	417 aa		0.46	□□□□□ -2.34
BEM3	YPL115C	ILV1	P00927	576 aa	Known RBP	0.46	□□□□□ -2.34
BEM3	YPL115C	COX10	P21592	462 aa		0.46	□□□□□ -2.34
BEM3	YPL115C	RBK1	P25332	333 aa		0.46	□□□□□ -2.34
BEM3	YPL115C	GIT1	P25346	518 aa		0.46	□□□□□ -2.34
BEM3	YPL115C	RPL16B	P26785	198 aa	Known RBP	0.46	□□□□□ -2.34
BEM3	YPL115C	FAA1	P30624	700 aa	Known RBP	0.46	□□□□□ -2.34
BEM3	YPL115C	KRE6	P32486	720 aa		0.46	□□□□□ -2.34
BEM3	YPL115C	CDC13	P32797	924 aa	Known RBP	0.46	□□□□□ -2.34
BEM3	YPL115C	YKL162C	P36052	402 aa		0.46	□□□□□ -2.34
BEM3	YPL115C	MCR1	P36060	302 aa	Known RBP	0.46	□□□□□ -2.34
BEM3	YPL115C	KEL2	P50090	882 aa		0.46	□□□□□ -2.34
BEM3	YPL115C	CPD1	P53314	239 aa		0.46	□□□□□ -2.34
BEM3	YPL115C	TAZ1	Q06510	381 aa		0.46	□□□□□ -2.34
BEM3	YPL115C	YOL019W	Q08157	551 aa		0.46	□□□□□ -2.34
BEM3	YPL115C	FRE8	Q12209	686 aa		0.46	□□□□□ -2.34
BEM3	YPL115C	GIS3	Q12418	502 aa		0.46	□□□□□ -2.34
BEM3	YPL115C	YMR316C-A	I2HB70	103 aa		0.45	□□□□□ -2.34
BEM3	YPL115C	RPL12A	P0CX53	165 aa	Known RBP	0.45	□□□□□ -2.34
BEM3	YPL115C	RPL12B	P0CX54	165 aa		0.45	□□□□□ -2.34
BEM3	YPL115C	CTA1	P15202	515 aa		0.45	□□□□□ -2.34
BEM3	YPL115C	ARF2	P19146	181 aa	Known RBP	0.45	□□□□□ -2.34
BEM3	YPL115C	SKG6	P32900	734 aa	Predicted RBP	0.45	□□□□□ -2.34
BEM3	YPL115C	SPT4	P32914	102 aa	Predicted RBP	0.45	□□□□□ -2.34
BEM3	YPL115C	MRPS5	P33759	307 aa		0.45	□□□□□ -2.34
BEM3	YPL115C	MLH1	P38920	769 aa		0.45	□□□□□ -2.34
BEM3	YPL115C	VOA1	P53262	265 aa		0.45	□□□□□ -2.34
BEM3	YPL115C	PRP38	Q00723	242 aa	Predicted RBP	0.45	□□□□□ -2.34
BEM3	YPL115C	IRC4	Q03036	179 aa		0.45	□□□□□ -2.34
BEM3	YPL115C	SNX41	Q04053	625 aa		0.45	□□□□□ -2.34
BEM3	YPL115C	GMC1	Q04399	608 aa		0.45	□□□□□ -2.34
BEM3	YPL115C	PRM6	Q04705	352 aa		0.45	□□□□□ -2.34
BEM3	YPL115C	CUR1	Q06469	252 aa		0.45	□□□□□ -2.34
BEM3	YPL115C	CTR3	Q06686	241 aa		0.45	□□□□□ -2.34
BEM3	YPL115C	BUG1	Q12191	341 aa		0.45	□□□□□ -2.34
BEM3	YPL115C	SRN2	Q99176	213 aa		0.45	□□□□□ -2.34
BEM3	YPL115C	TDH2	P00358	332 aa	Known RBP	0.45	□□□□□ -2.34

Retrieved 100 of 5,963 RNA–protein pairs in 51.2 ms