RNA–Protein interactions for RNA: YPL087W

YDC1, Transcript of Alkaline dihydroceramidase, involved in sphingolipid metabolism, yeast

Gene YDC1, Length 954 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDC1	YPL087W	NSE1	Q07913	336 aa		4.14	□□□□□ -1.75
YDC1	YPL087W	SKI7	Q08491	747 aa	Predicted RBP	4.14	□□□□□ -1.75
YDC1	YPL087W	RKM1	Q08961	583 aa	Predicted RBP	4.14	□□□□□ -1.75
YDC1	YPL087W	YPL247C	Q12523	523 aa		4.14	□□□□□ -1.75
YDC1	YPL087W	YOR338W	Q99326	363 aa		4.14	□□□□□ -1.75
YDC1	YPL087W	BEM2	P39960	2167 aa	Known RBP	4.14	□□□□□ -1.75
YDC1	YPL087W	YLR422W	Q06409	1932 aa		4.13	□□□□□ -1.75
YDC1	YPL087W	CCH1	P50077	2039 aa		4.13	□□□□□ -1.75
YDC1	YPL087W	SCEI	P03882	235 aa		4.13	□□□□□ -1.75
YDC1	YPL087W	UGA1	P17649	471 aa		4.13	□□□□□ -1.75
YDC1	YPL087W	YCR099C	P25657	155 aa		4.13	□□□□□ -1.75
YDC1	YPL087W	CIN8	P27895	1000 aa		4.13	□□□□□ -1.75
YDC1	YPL087W	TIP20	P33891	701 aa		4.13	□□□□□ -1.75
YDC1	YPL087W	PTC1	P35182	281 aa		4.13	□□□□□ -1.75
YDC1	YPL087W	ECM4	P36156	370 aa		4.13	□□□□□ -1.75
YDC1	YPL087W	SKG1	P36169	355 aa		4.13	□□□□□ -1.75
YDC1	YPL087W	NPT1	P39683	429 aa	Known RBP	4.13	□□□□□ -1.75
YDC1	YPL087W	UTP18	P40362	594 aa	Predicted RBP	4.13	□□□□□ -1.75
YDC1	YPL087W	REE1	P40893	198 aa		4.13	□□□□□ -1.75
YDC1	YPL087W	NCA3	P46955	337 aa		4.13	□□□□□ -1.75
YDC1	YPL087W	KEL2	P50090	882 aa		4.13	□□□□□ -1.75
YDC1	YPL087W	RMR1	P53060	241 aa		4.13	□□□□□ -1.75
YDC1	YPL087W	YNL143C	P53908	130 aa		4.13	□□□□□ -1.75
YDC1	YPL087W	SWP1	Q02795	286 aa		4.13	□□□□□ -1.75
YDC1	YPL087W	RSN1	Q03516	953 aa		4.13	□□□□□ -1.75
YDC1	YPL087W	ARX1	Q03862	593 aa	Known RBP	4.13	□□□□□ -1.75
YDC1	YPL087W	YMR130W	Q04223	302 aa		4.13	□□□□□ -1.75
YDC1	YPL087W	TRM12	Q04235	462 aa		4.13	□□□□□ -1.75
YDC1	YPL087W	ROY1	Q04847	553 aa		4.13	□□□□□ -1.75
YDC1	YPL087W	YPR114W	Q06107	315 aa		4.13	□□□□□ -1.75
YDC1	YPL087W	YOR342C	Q12182	319 aa		4.13	□□□□□ -1.75
YDC1	YPL087W	PEX11	Q12462	236 aa		4.13	□□□□□ -1.75
YDC1	YPL087W	PFK27	Q12471	397 aa	Predicted RBP	4.13	□□□□□ -1.75
YDC1	YPL087W	MHF2	Q3E829	80 aa		4.13	□□□□□ -1.75
YDC1	YPL087W	SPT3	P06844	337 aa		4.12	□□□□□ -1.75
YDC1	YPL087W	PDX1	P16451	410 aa		4.12	□□□□□ -1.75
YDC1	YPL087W	DAL81	P21657	970 aa		4.12	□□□□□ -1.75
YDC1	YPL087W	NAM9	P27929	486 aa		4.12	□□□□□ -1.75
YDC1	YPL087W	PEX3	P28795	441 aa		4.12	□□□□□ -1.75
YDC1	YPL087W	RPT5	P33297	434 aa	Known RBP	4.12	□□□□□ -1.75
YDC1	YPL087W	PRP18	P33411	251 aa	Predicted RBP	4.12	□□□□□ -1.75
YDC1	YPL087W	NUF2	P33895	451 aa		4.12	□□□□□ -1.75
YDC1	YPL087W	MRPL17	P36528	281 aa		4.12	□□□□□ -1.75
YDC1	YPL087W	YBR056W	P38081	501 aa		4.12	□□□□□ -1.75
YDC1	YPL087W	PRM5	P40476	318 aa		4.12	□□□□□ -1.75
YDC1	YPL087W	GAB1	P41733	394 aa		4.12	□□□□□ -1.75
YDC1	YPL087W	FAR7	P43592	221 aa		4.12	□□□□□ -1.75
YDC1	YPL087W	YFR018C	P43599	363 aa		4.12	□□□□□ -1.75
YDC1	YPL087W	TIM13	P53299	105 aa		4.12	□□□□□ -1.75
YDC1	YPL087W	YNL260C	P53846	198 aa		4.12	□□□□□ -1.75
YDC1	YPL087W	RNY1	Q02933	434 aa	Known RBP	4.12	□□□□□ -1.75
YDC1	YPL087W	GOT1	Q03554	138 aa		4.12	□□□□□ -1.75
YDC1	YPL087W	VHS1	Q03785	461 aa		4.12	□□□□□ -1.75
YDC1	YPL087W	YDR124W	Q04608	324 aa		4.12	□□□□□ -1.75
YDC1	YPL087W	DBP9	Q06218	594 aa	Known RBP	4.12	□□□□□ -1.75
YDC1	YPL087W	MFG1	Q07684	458 aa		4.12	□□□□□ -1.75
YDC1	YPL087W	LOT6	Q07923	191 aa		4.12	□□□□□ -1.75
YDC1	YPL087W	RRP42	Q12277	265 aa	Predicted RBP	4.12	□□□□□ -1.75
YDC1	YPL087W	RPN6	Q12377	434 aa		4.12	□□□□□ -1.75
YDC1	YPL087W	MED11	Q99278	115 aa		4.12	□□□□□ -1.75
YDC1	YPL087W	UBR1	P19812	1950 aa		4.12	□□□□□ -1.75
YDC1	YPL087W	RAS2	P01120	322 aa	Known RBP	4.11	□□□□□ -1.75
YDC1	YPL087W	RAD7	P06779	565 aa		4.11	□□□□□ -1.75
YDC1	YPL087W	RBK1	P25332	333 aa		4.11	□□□□□ -1.75
YDC1	YPL087W	RAD51	P25454	400 aa		4.11	□□□□□ -1.75
YDC1	YPL087W	FMP23	P38231	175 aa		4.11	□□□□□ -1.75
YDC1	YPL087W	BMT2	P38278	337 aa		4.11	□□□□□ -1.75
YDC1	YPL087W	YBR285W	P38354	144 aa		4.11	□□□□□ -1.75
YDC1	YPL087W	LRP1	P38801	184 aa	Known RBP	4.11	□□□□□ -1.75
YDC1	YPL087W	FAD1	P38913	306 aa		4.11	□□□□□ -1.75
YDC1	YPL087W	RGI1	P40043	161 aa	Predicted RBP	4.11	□□□□□ -1.75
YDC1	YPL087W	GLG2	P47011	380 aa		4.11	□□□□□ -1.75
YDC1	YPL087W	SDT1	P53078	280 aa		4.11	□□□□□ -1.75
YDC1	YPL087W	TRM112	P53738	135 aa	Predicted RBP	4.11	□□□□□ -1.75
YDC1	YPL087W	PRM1	P53835	661 aa		4.11	□□□□□ -1.75
YDC1	YPL087W	COG5	P53951	403 aa		4.11	□□□□□ -1.75
YDC1	YPL087W	RRN5	Q02983	363 aa		4.11	□□□□□ -1.75
YDC1	YPL087W	ORT1	Q12375	292 aa		4.11	□□□□□ -1.75
YDC1	YPL087W	RMD5	Q12508	421 aa		4.11	□□□□□ -1.75
YDC1	YPL087W	YCL012C	Q8J0M4	134 aa		4.11	□□□□□ -1.75
YDC1	YPL087W	RIB3	Q99258	208 aa		4.11	□□□□□ -1.75
YDC1	YPL087W	TPK3	P05986	398 aa		4.1	□□□□□ -1.75
YDC1	YPL087W	CPA1	P07258	411 aa	Known RBP	4.1	□□□□□ -1.75
YDC1	YPL087W	HOM3	P10869	527 aa		4.1	□□□□□ -1.75
YDC1	YPL087W	GAL3	P13045	520 aa		4.1	□□□□□ -1.75
YDC1	YPL087W	PHO84	P25297	587 aa	Known RBP	4.1	□□□□□ -1.75
YDC1	YPL087W	SPS19	P32573	292 aa	Known RBP	4.1	□□□□□ -1.75
YDC1	YPL087W	MRPL6	P32904	214 aa		4.1	□□□□□ -1.75
YDC1	YPL087W	RRN10	P38204	145 aa		4.1	□□□□□ -1.75
YDC1	YPL087W	MNN9	P39107	395 aa	Known RBP	4.1	□□□□□ -1.75
YDC1	YPL087W	MOB1	P40484	314 aa		4.1	□□□□□ -1.75
YDC1	YPL087W	CAK1	P43568	368 aa	Predicted RBP	4.1	□□□□□ -1.75
YDC1	YPL087W	AIM23	P47015	356 aa		4.1	□□□□□ -1.75
YDC1	YPL087W	MDM34	P53083	459 aa		4.1	□□□□□ -1.75
YDC1	YPL087W	YNL140C	P53910	189 aa		4.1	□□□□□ -1.75
YDC1	YPL087W	YMR111C	Q04461	462 aa	Predicted RBP	4.1	□□□□□ -1.75
YDC1	YPL087W	MDM30	Q05930	598 aa		4.1	□□□□□ -1.75
YDC1	YPL087W	RIF2	Q06208	395 aa		4.1	□□□□□ -1.75
YDC1	YPL087W	GPI11	Q06636	219 aa		4.1	□□□□□ -1.75
YDC1	YPL087W	YDL114W	Q07530	308 aa		4.1	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 22.4 ms