RNA–Protein interactions for RNA: YPL085W

SEC16, Transcript of COPII vesicle coat protein required for ER transport vesicle budding, yeastyeast

Gene SEC16, Length 6,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC16YPL085W TRM112P53738 135 aaPredicted RBP2.05□□□□□ -2.08
SEC16YPL085W SDH1Q00711 640 aa2.05□□□□□ -2.08
SEC16YPL085W LPX1Q12405 387 aaKnown RBP2.05□□□□□ -2.08
SEC16YPL085W GAL4P04386 881 aa2.05□□□□□ -2.08
SEC16YPL085W KRR1P25586 316 aaPredicted RBP2.05□□□□□ -2.08
SEC16YPL085W LDB16P25587 256 aa2.05□□□□□ -2.08
SEC16YPL085W WBP1P33767 430 aaKnown RBP2.05□□□□□ -2.08
SEC16YPL085W SHB17P36136 271 aaKnown RBP2.05□□□□□ -2.08
SEC16YPL085W FLR1P38124 548 aa2.05□□□□□ -2.08
SEC16YPL085W WSS1P38838 269 aa2.05□□□□□ -2.08
SEC16YPL085W MAF1P41910 395 aa2.05□□□□□ -2.08
SEC16YPL085W PKP2P53170 491 aa2.05□□□□□ -2.08
SEC16YPL085W YMD8Q03697 442 aa2.05□□□□□ -2.08
SEC16YPL085W HNT1Q04344 158 aaKnown RBP2.05□□□□□ -2.08
SEC16YPL085W SNO4Q04902 237 aa2.05□□□□□ -2.08
SEC16YPL085W SPR28Q04921 423 aa2.05□□□□□ -2.08
SEC16YPL085W HSP33Q08914 237 aaKnown RBP2.05□□□□□ -2.08
SEC16YPL085W HSP32Q08992 237 aa2.05□□□□□ -2.08
SEC16YPL085W PRS5Q12265 496 aaKnown RBP2.05□□□□□ -2.08
SEC16YPL085W BBP1Q12365 385 aa2.05□□□□□ -2.08
SEC16YPL085W PHO4P07270 312 aaKnown RBP2.05□□□□□ -2.08
SEC16YPL085W MER1P16523 270 aa2.05□□□□□ -2.08
SEC16YPL085W GRX2P17695 143 aaKnown RBP2.05□□□□□ -2.08
SEC16YPL085W SAG1P20840 650 aa2.05□□□□□ -2.08
SEC16YPL085W CCA1P21269 546 aa2.05□□□□□ -2.08
SEC16YPL085W SFK1P35735 353 aa2.05□□□□□ -2.08
SEC16YPL085W EMC3P36039 253 aa2.05□□□□□ -2.08
SEC16YPL085W GPI16P38875 610 aa2.05□□□□□ -2.08
SEC16YPL085W FMP10P40098 244 aa2.05□□□□□ -2.08
SEC16YPL085W QRI1P43123 477 aaKnown RBP2.05□□□□□ -2.08
SEC16YPL085W RPA34P47006 233 aaPredicted RBP2.05□□□□□ -2.08
SEC16YPL085W YNR066CP53752 436 aa2.05□□□□□ -2.08
SEC16YPL085W YNL165WP53891 406 aa2.05□□□□□ -2.08
SEC16YPL085W TIM11P81449 96 aaPredicted RBP2.05□□□□□ -2.08
SEC16YPL085W PIR3Q03180 325 aa2.05□□□□□ -2.08
SEC16YPL085W RRP45Q05636 305 aaKnown RBP2.05□□□□□ -2.08
SEC16YPL085W AVO1Q08236 1176 aa2.05□□□□□ -2.08
SEC16YPL085W REX4Q08237 289 aa2.05□□□□□ -2.08
SEC16YPL085W YHR213W-AQ8TGT4 77 aa2.05□□□□□ -2.08
SEC16YPL085W ADE5,7P07244 802 aaKnown RBP2.04□□□□□ -2.08
SEC16YPL085W MSF1P08425 469 aa2.04□□□□□ -2.08
SEC16YPL085W SNF4P12904 322 aa2.04□□□□□ -2.08
SEC16YPL085W ENA1P13587 1091 aa2.04□□□□□ -2.08
SEC16YPL085W SNF6P18888 332 aa2.04□□□□□ -2.08
SEC16YPL085W YCK1P23291 538 aa2.04□□□□□ -2.08
SEC16YPL085W GAR1P28007 205 aaKnown RBP2.04□□□□□ -2.08
SEC16YPL085W PRO1P32264 428 aa2.04□□□□□ -2.08
SEC16YPL085W THI4P32318 326 aa2.04□□□□□ -2.08
SEC16YPL085W DUT1P33317 147 aa2.04□□□□□ -2.08
SEC16YPL085W CLG1P35190 452 aa2.04□□□□□ -2.08
SEC16YPL085W NVJ1P38881 321 aa2.04□□□□□ -2.08
SEC16YPL085W FAD1P38913 306 aa2.04□□□□□ -2.08
SEC16YPL085W SHU2P38957 223 aa2.04□□□□□ -2.08
SEC16YPL085W AVT7P40501 490 aa2.04□□□□□ -2.08
SEC16YPL085W PHB1P40961 287 aa2.04□□□□□ -2.08
SEC16YPL085W IMD3P50095 523 aaKnown RBP2.04□□□□□ -2.08
SEC16YPL085W AIF1P52923 378 aa2.04□□□□□ -2.08
SEC16YPL085W USE1P53146 245 aa2.04□□□□□ -2.08
SEC16YPL085W YGR266WP53326 701 aa2.04□□□□□ -2.08
SEC16YPL085W ENA2Q01896 1091 aa2.04□□□□□ -2.08
SEC16YPL085W YMR087WQ04299 284 aa2.04□□□□□ -2.08
SEC16YPL085W SDH7Q04401 133 aa2.04□□□□□ -2.08
SEC16YPL085W GIC2Q06648 383 aa2.04□□□□□ -2.08
SEC16YPL085W ENA5Q12691 1091 aa2.04□□□□□ -2.08
SEC16YPL085W BGL2P15703 313 aaKnown RBP2.04□□□□□ -2.08
SEC16YPL085W CDC20P26309 610 aa2.04□□□□□ -2.08
SEC16YPL085W VRP1P37370 817 aa2.04□□□□□ -2.08
SEC16YPL085W CHL4P38907 458 aa2.04□□□□□ -2.08
SEC16YPL085W MBP1P39678 833 aa2.04□□□□□ -2.08
SEC16YPL085W IRC24P40580 263 aa2.04□□□□□ -2.08
SEC16YPL085W PMT6P42934 759 aa2.04□□□□□ -2.08
SEC16YPL085W PRM10P42946 383 aa2.04□□□□□ -2.08
SEC16YPL085W CTR1P49573 406 aa2.04□□□□□ -2.08
SEC16YPL085W IMD4P50094 524 aaKnown RBP2.04□□□□□ -2.08
SEC16YPL085W MTQ1P53944 314 aa2.04□□□□□ -2.08
SEC16YPL085W PFA5Q03289 374 aa2.04□□□□□ -2.08
SEC16YPL085W FMP45Q07651 309 aa2.04□□□□□ -2.08
SEC16YPL085W YOR114WQ12219 294 aa2.04□□□□□ -2.08
SEC16YPL085W IMG1P25626 169 aa2.04□□□□□ -2.08
SEC16YPL085W TIF3P34167 436 aaKnown RBP2.04□□□□□ -2.08
SEC16YPL085W TOD6P34219 525 aa2.04□□□□□ -2.08
SEC16YPL085W PTI1P39927 425 aaPredicted RBP2.04□□□□□ -2.08
SEC16YPL085W PCL6P40038 420 aa2.04□□□□□ -2.08
SEC16YPL085W RMD8P43620 662 aa2.04□□□□□ -2.08
SEC16YPL085W TIS11P47977 285 aa2.04□□□□□ -2.08
SEC16YPL085W YGL235WP53071 178 aa2.04□□□□□ -2.08
SEC16YPL085W CUZ1P53899 274 aa2.04□□□□□ -2.08
SEC16YPL085W SUE1Q06524 206 aa2.04□□□□□ -2.08
SEC16YPL085W TY1A-BRQ12217 440 aa2.04□□□□□ -2.08
SEC16YPL085W MED4Q12343 284 aa2.04□□□□□ -2.08
SEC16YPL085W HBN1Q96VH4 193 aa2.04□□□□□ -2.08
SEC16YPL085W COR1P07256 457 aa2.04□□□□□ -2.08
SEC16YPL085W PET494P07390 489 aaPredicted RBP2.04□□□□□ -2.08
SEC16YPL085W SLY41P22215 453 aa2.04□□□□□ -2.08
SEC16YPL085W TAH1P25638 111 aaPredicted RBP2.04□□□□□ -2.08
SEC16YPL085W BEM1P29366 551 aa2.04□□□□□ -2.08
SEC16YPL085W SEC61P32915 480 aa2.04□□□□□ -2.08
SEC16YPL085W PTH2P34222 208 aa2.04□□□□□ -2.08
SEC16YPL085W TCM62P38228 572 aaKnown RBP2.04□□□□□ -2.08
SEC16YPL085W ECM8P38246 354 aa2.04□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 51.5 ms