RNA–Protein interactions for RNA: YPL065W

VPS28, Transcript of Component of the ESCRT-I complex, yeastyeast

Gene VPS28, Length 729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS28YPL065W LAG2Q92325 660 aa3.51□□□□□ -1.85
VPS28YPL065W GPX1P36014 167 aa3.5□□□□□ -1.85
VPS28YPL065W HIS2P38635 335 aa3.5□□□□□ -1.85
VPS28YPL065W AGP3P43548 558 aa3.5□□□□□ -1.85
VPS28YPL065W VTI1Q04338 217 aa3.5□□□□□ -1.85
VPS28YPL065W ECM19Q06011 112 aa3.5□□□□□ -1.85
VPS28YPL065W BCP1Q06338 283 aa3.5□□□□□ -1.85
VPS28YPL065W TAZ1Q06510 381 aa3.5□□□□□ -1.85
VPS28YPL065W YOR292CQ08743 309 aa3.5□□□□□ -1.85
VPS28YPL065W PRP46Q12417 451 aaPredicted RBP3.5□□□□□ -1.85
VPS28YPL065W FMP16Q12497 93 aa3.5□□□□□ -1.85
VPS28YPL065W DAL5P15365 543 aa3.49□□□□□ -1.85
VPS28YPL065W HPR1P17629 752 aaKnown RBP3.49□□□□□ -1.85
VPS28YPL065W RPB9P27999 122 aa3.49□□□□□ -1.85
VPS28YPL065W IMP3P32899 183 aaPredicted RBP3.49□□□□□ -1.85
VPS28YPL065W RIB7P33312 244 aa3.49□□□□□ -1.85
VPS28YPL065W YKL063CP35725 167 aa3.49□□□□□ -1.85
VPS28YPL065W UFE1P41834 346 aa3.49□□□□□ -1.85
VPS28YPL065W KEL2P50090 882 aa3.49□□□□□ -1.85
VPS28YPL065W TFC7Q12415 435 aa3.49□□□□□ -1.85
VPS28YPL065W DFM1Q12743 341 aaKnown RBP3.49□□□□□ -1.85
VPS28YPL065W CCH1P50077 2039 aa3.49□□□□□ -1.85
VPS28YPL065W TDH1P00360 332 aaKnown RBP3.48□□□□□ -1.85
VPS28YPL065W ATP6P00854 259 aa3.48□□□□□ -1.85
VPS28YPL065W FUS3P16892 353 aaKnown RBP3.48□□□□□ -1.85
VPS28YPL065W ICL1P28240 557 aaPredicted RBP3.48□□□□□ -1.85
VPS28YPL065W TPO5P36029 618 aa3.48□□□□□ -1.85
VPS28YPL065W RPC37P36121 282 aa3.48□□□□□ -1.85
VPS28YPL065W PEX18P38855 283 aa3.48□□□□□ -1.85
VPS28YPL065W BDH1P39714 382 aa3.48□□□□□ -1.85
VPS28YPL065W SHQ1P40486 507 aaPredicted RBP3.48□□□□□ -1.85
VPS28YPL065W YPL077CQ02831 240 aa3.48□□□□□ -1.85
VPS28YPL065W SEC13Q04491 297 aaKnown RBP3.48□□□□□ -1.85
VPS28YPL065W BER1Q06688 274 aaKnown RBP3.48□□□□□ -1.85
VPS28YPL065W YDL211CQ12121 372 aa3.48□□□□□ -1.85
VPS28YPL065W POM33Q12164 279 aa3.48□□□□□ -1.85
VPS28YPL065W RRP42Q12277 265 aaPredicted RBP3.48□□□□□ -1.85
VPS28YPL065W FRS2P15625 503 aaKnown RBP3.47□□□□□ -1.85
VPS28YPL065W ZIP1P31111 875 aa3.47□□□□□ -1.85
VPS28YPL065W FRT2P39734 528 aa3.47□□□□□ -1.85
VPS28YPL065W MRX8Q05473 314 aa3.47□□□□□ -1.85
VPS28YPL065W PEX30Q06169 523 aa3.47□□□□□ -1.85
VPS28YPL065W VIK1Q12045 647 aa3.47□□□□□ -1.85
VPS28YPL065W TRM10Q12400 293 aa3.47□□□□□ -1.85
VPS28YPL065W RRP36Q12481 300 aaPredicted RBP3.47□□□□□ -1.85
VPS28YPL065W YPR064WQ12492 139 aa3.47□□□□□ -1.85
VPS28YPL065W YCR025CP25352 136 aa3.46□□□□□ -1.86
VPS28YPL065W CDC13P32797 924 aaKnown RBP3.46□□□□□ -1.86
VPS28YPL065W SKG6P32900 734 aaPredicted RBP3.46□□□□□ -1.86
VPS28YPL065W EBP2P36049 427 aaKnown RBP3.46□□□□□ -1.86
VPS28YPL065W FRM2P37261 193 aa3.46□□□□□ -1.86
VPS28YPL065W VAB2P40003 282 aa3.46□□□□□ -1.86
VPS28YPL065W FMP33P46998 180 aa3.46□□□□□ -1.86
VPS28YPL065W YGL118CP53132 145 aa3.46□□□□□ -1.86
VPS28YPL065W YPL278CQ08990 100 aa3.46□□□□□ -1.86
VPS28YPL065W SSA3P09435 649 aaKnown RBP3.45□□□□□ -1.86
VPS28YPL065W SPT4P32914 102 aaPredicted RBP3.45□□□□□ -1.86
VPS28YPL065W MIC19P43594 170 aa3.45□□□□□ -1.86
VPS28YPL065W MPP10P47083 593 aaKnown RBP3.45□□□□□ -1.86
VPS28YPL065W CAX4P53223 239 aa3.45□□□□□ -1.86
VPS28YPL065W GPN3Q06543 272 aa3.45□□□□□ -1.86
VPS28YPL065W TFS1P14306 219 aa3.44□□□□□ -1.86
VPS28YPL065W TDA11P38854 504 aa3.44□□□□□ -1.86
VPS28YPL065W YIL054WP40524 105 aa3.44□□□□□ -1.86
VPS28YPL065W YIA6P40556 373 aa3.44□□□□□ -1.86
VPS28YPL065W HST4P53688 370 aa3.44□□□□□ -1.86
VPS28YPL065W DIB1Q06819 143 aaPredicted RBP3.44□□□□□ -1.86
VPS28YPL065W IES4Q08561 116 aa3.44□□□□□ -1.86
VPS28YPL065W YSR3P23501 404 aa3.43□□□□□ -1.86
VPS28YPL065W IFM1P25038 676 aa3.43□□□□□ -1.86
VPS28YPL065W YPT32P51996 222 aaKnown RBP3.43□□□□□ -1.86
VPS28YPL065W YNL040WP53960 456 aaPredicted RBP3.43□□□□□ -1.86
VPS28YPL065W ACT1P60010 375 aaKnown RBP3.43□□□□□ -1.86
VPS28YPL065W SPP2Q02521 185 aa3.43□□□□□ -1.86
VPS28YPL065W DPP1Q05521 289 aa3.43□□□□□ -1.86
VPS28YPL065W YOR114WQ12219 294 aa3.43□□□□□ -1.86
VPS28YPL065W ILV1P00927 576 aaKnown RBP3.42□□□□□ -1.86
VPS28YPL065W CPT1P17898 393 aa3.42□□□□□ -1.86
VPS28YPL065W MRPL6P32904 214 aa3.42□□□□□ -1.86
VPS28YPL065W MRPL37P36532 105 aa3.42□□□□□ -1.86
VPS28YPL065W TRR2P38816 342 aa3.42□□□□□ -1.86
VPS28YPL065W YIL012WP40551 113 aa3.42□□□□□ -1.86
VPS28YPL065W RPN14P53196 417 aa3.42□□□□□ -1.86
VPS28YPL065W SMD1Q02260 146 aaPredicted RBP3.42□□□□□ -1.86
VPS28YPL065W CKA2P19454 339 aa3.41□□□□□ -1.86
VPS28YPL065W MBA1P38300 278 aa3.41□□□□□ -1.86
VPS28YPL065W ASP1P38986 381 aaPredicted RBP3.41□□□□□ -1.86
VPS28YPL065W ASG7P46993 209 aa3.41□□□□□ -1.86
VPS28YPL065W EMC2P47133 292 aaKnown RBP3.41□□□□□ -1.86
VPS28YPL065W LSB1P53281 241 aa3.41□□□□□ -1.86
VPS28YPL065W YMR209CQ03648 457 aa3.41□□□□□ -1.86
VPS28YPL065W YAL063C-AQ3E791 96 aa3.41□□□□□ -1.86
VPS28YPL065W INO80P53115 1489 aa3.41□□□□□ -1.86
VPS28YPL065W DAL81P21657 970 aa3.4□□□□□ -1.87
VPS28YPL065W AEP1P32493 518 aa3.4□□□□□ -1.87
VPS28YPL065W GCG1P32656 232 aaKnown RBP3.4□□□□□ -1.87
VPS28YPL065W AIM29P36154 155 aa3.4□□□□□ -1.87
VPS28YPL065W EDC2P40023 145 aaPredicted RBP3.4□□□□□ -1.87
VPS28YPL065W TPN1P53099 579 aa3.4□□□□□ -1.87
VPS28YPL065W CPD1P53314 239 aa3.4□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 54.4 ms