RNA–Protein interactions for RNA: YLR438C-A

LSM3, Transcript of Lsm (Like Sm) protein, yeast

Gene LSM3, Length 270 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSM3	YLR438C-A	AIM6	Q07716	390 aa		11.35	□□□□□ -0.59
LSM3	YLR438C-A	YOR378W	Q08902	515 aa		11.35	□□□□□ -0.59
LSM3	YLR438C-A	YDL176W	Q12027	708 aa		11.35	□□□□□ -0.59
LSM3	YLR438C-A	MSW1	P04803	379 aa		11.34	□□□□□ -0.59
LSM3	YLR438C-A	CBP6	P07253	162 aa	Predicted RBP	11.34	□□□□□ -0.59
LSM3	YLR438C-A	STE50	P25344	346 aa		11.34	□□□□□ -0.59
LSM3	YLR438C-A	FUN19	P28003	413 aa	Predicted RBP	11.34	□□□□□ -0.59
LSM3	YLR438C-A	MCM10	P32354	571 aa		11.34	□□□□□ -0.59
LSM3	YLR438C-A	DTR1	P38125	572 aa		11.34	□□□□□ -0.59
LSM3	YLR438C-A	AMN1	P38285	549 aa	Predicted RBP	11.34	□□□□□ -0.59
LSM3	YLR438C-A	PRY1	P47032	299 aa		11.34	□□□□□ -0.59
LSM3	YLR438C-A	BSC5	P53755	489 aa		11.34	□□□□□ -0.59
LSM3	YLR438C-A	APM1	Q00776	475 aa	Predicted RBP	11.34	□□□□□ -0.59
LSM3	YLR438C-A	FDC1	Q03034	503 aa		11.34	□□□□□ -0.59
LSM3	YLR438C-A	GRX3	Q03835	250 aa		11.34	□□□□□ -0.59
LSM3	YLR438C-A	MIM1	Q08176	113 aa		11.34	□□□□□ -0.59
LSM3	YLR438C-A	GRE1	Q08969	168 aa		11.34	□□□□□ -0.59
LSM3	YLR438C-A	THP3	Q12049	470 aa	Known RBP	11.34	□□□□□ -0.59
LSM3	YLR438C-A	CUP1-1	P0CX80	61 aa		11.33	□□□□□ -0.6
LSM3	YLR438C-A	CUP1-2	P0CX81	61 aa		11.33	□□□□□ -0.6
LSM3	YLR438C-A	SPO7	P18410	259 aa		11.33	□□□□□ -0.6
LSM3	YLR438C-A	DPB2	P24482	689 aa	Predicted RBP	11.33	□□□□□ -0.6
LSM3	YLR438C-A	THI4	P32318	326 aa		11.33	□□□□□ -0.6
LSM3	YLR438C-A	PFS2	P42841	465 aa	Known RBP	11.33	□□□□□ -0.6
LSM3	YLR438C-A	RVB1	Q03940	463 aa	Known RBP	11.33	□□□□□ -0.6
LSM3	YLR438C-A	MGR3	Q04472	501 aa		11.33	□□□□□ -0.6
LSM3	YLR438C-A	RRP9	Q06506	573 aa	Known RBP	11.33	□□□□□ -0.6
LSM3	YLR438C-A	MDM36	Q06820	579 aa		11.33	□□□□□ -0.6
LSM3	YLR438C-A	GCN1	P33892	2672 aa	Known RBP	11.32	□□□□□ -0.6
LSM3	YLR438C-A	RPL24B	P24000	155 aa	Known RBP	11.32	□□□□□ -0.6
LSM3	YLR438C-A	KRR1	P25586	316 aa	Predicted RBP	11.32	□□□□□ -0.6
LSM3	YLR438C-A	PTC6	P25646	442 aa		11.32	□□□□□ -0.6
LSM3	YLR438C-A	PPA2	P28239	310 aa		11.32	□□□□□ -0.6
LSM3	YLR438C-A	CAM1	P29547	415 aa	Known RBP	11.32	□□□□□ -0.6
LSM3	YLR438C-A	FMP23	P38231	175 aa		11.32	□□□□□ -0.6
LSM3	YLR438C-A	RPN14	P53196	417 aa		11.32	□□□□□ -0.6
LSM3	YLR438C-A	SRL4	Q03085	281 aa		11.32	□□□□□ -0.6
LSM3	YLR438C-A	CTS2	Q06350	511 aa		11.32	□□□□□ -0.6
LSM3	YLR438C-A	YLR352W	Q06479	807 aa		11.32	□□□□□ -0.6
LSM3	YLR438C-A	ACF2	Q12168	779 aa		11.32	□□□□□ -0.6
LSM3	YLR438C-A	YOL114C	Q12322	202 aa		11.32	□□□□□ -0.6
LSM3	YLR438C-A	HMS1	Q12398	434 aa		11.32	□□□□□ -0.6
LSM3	YLR438C-A	YPR1	Q12458	312 aa		11.32	□□□□□ -0.6
LSM3	YLR438C-A	FLO9	P39712	1322 aa		11.32	□□□□□ -0.6
LSM3	YLR438C-A	FUN26	P31381	517 aa		11.31	□□□□□ -0.6
LSM3	YLR438C-A	ARO7	P32178	256 aa		11.31	□□□□□ -0.6
LSM3	YLR438C-A	PUB1	P32588	453 aa	Known RBP RIP-Chip data	11.31	□□□□□ -0.6	not detected
LSM3	YLR438C-A	MTC2	P34246	357 aa		11.31	□□□□□ -0.6
LSM3	YLR438C-A	SRP102	P36057	244 aa	Predicted RBP	11.31	□□□□□ -0.6
LSM3	YLR438C-A	YBR063C	P38083	404 aa		11.31	□□□□□ -0.6
LSM3	YLR438C-A	SAY1	P53324	424 aa		11.31	□□□□□ -0.6
LSM3	YLR438C-A	AGE1	Q04412	482 aa		11.31	□□□□□ -0.6
LSM3	YLR438C-A	GAL83	Q04739	417 aa		11.31	□□□□□ -0.6
LSM3	YLR438C-A	NNT1	Q05874	261 aa		11.31	□□□□□ -0.6
LSM3	YLR438C-A	HRI1	Q05905	244 aa	Known RBP	11.31	□□□□□ -0.6
LSM3	YLR438C-A	GAS2	Q06135	555 aa		11.31	□□□□□ -0.6
LSM3	YLR438C-A	FRE5	Q08908	694 aa		11.31	□□□□□ -0.6
LSM3	YLR438C-A	YHR214C-E	Q8TGK0	99 aa		11.31	□□□□□ -0.6
LSM3	YLR438C-A	REP1	P03871	373 aa		11.3	□□□□□ -0.6
LSM3	YLR438C-A	AHC2	P25649	128 aa		11.3	□□□□□ -0.6
LSM3	YLR438C-A	RPC34	P32910	317 aa		11.3	□□□□□ -0.6
LSM3	YLR438C-A	SOF1	P33750	489 aa	Known RBP	11.3	□□□□□ -0.6
LSM3	YLR438C-A	MSY1	P48527	492 aa		11.3	□□□□□ -0.6
LSM3	YLR438C-A	KAP120	Q02932	1032 aa		11.3	□□□□□ -0.6
LSM3	YLR438C-A	RRP17	Q04031	235 aa	Predicted RBP	11.3	□□□□□ -0.6
LSM3	YLR438C-A	RBS1	Q05672	457 aa	Known RBP	11.3	□□□□□ -0.6
LSM3	YLR438C-A	MCM21	Q06675	368 aa		11.3	□□□□□ -0.6
LSM3	YLR438C-A	BAG7	Q12128	409 aa		11.3	□□□□□ -0.6
LSM3	YLR438C-A	RPS13	P05756	151 aa	Known RBP	11.29	□□□□□ -0.6
LSM3	YLR438C-A	PHO2	P07269	559 aa		11.29	□□□□□ -0.6
LSM3	YLR438C-A	HMG1	P12683	1054 aa		11.29	□□□□□ -0.6
LSM3	YLR438C-A	PUT3	P25502	979 aa	Predicted RBP	11.29	□□□□□ -0.6
LSM3	YLR438C-A	MGE1	P38523	228 aa		11.29	□□□□□ -0.6
LSM3	YLR438C-A	DPB11	P47027	764 aa	Predicted RBP	11.29	□□□□□ -0.6
LSM3	YLR438C-A	ADO1	P47143	340 aa	Known RBP	11.29	□□□□□ -0.6
LSM3	YLR438C-A	HSV2	P50079	448 aa	Predicted RBP	11.29	□□□□□ -0.6
LSM3	YLR438C-A	PPT1	P53043	513 aa		11.29	□□□□□ -0.6
LSM3	YLR438C-A	PAU12	P53343	120 aa		11.29	□□□□□ -0.6
LSM3	YLR438C-A	RSM24	Q03976	319 aa		11.29	□□□□□ -0.6
LSM3	YLR438C-A	SYC1	Q08553	188 aa	Predicted RBP	11.29	□□□□□ -0.6
LSM3	YLR438C-A	OPI3	P05375	206 aa		11.28	□□□□□ -0.6
LSM3	YLR438C-A	UTP11	P34247	250 aa	Predicted RBP	11.28	□□□□□ -0.6
LSM3	YLR438C-A	YPK3	P38070	525 aa		11.28	□□□□□ -0.6
LSM3	YLR438C-A	JLP2	P40206	208 aa		11.28	□□□□□ -0.6
LSM3	YLR438C-A	YAE1	P47118	141 aa	Predicted RBP	11.28	□□□□□ -0.6
LSM3	YLR438C-A	YDR102C	Q03864	110 aa		11.28	□□□□□ -0.6
LSM3	YLR438C-A	FMP42	Q04991	504 aa		11.28	□□□□□ -0.6
LSM3	YLR438C-A	CDC31	P06704	161 aa	Known RBP	11.27	□□□□□ -0.61
LSM3	YLR438C-A	PRB1	P09232	635 aa		11.27	□□□□□ -0.61
LSM3	YLR438C-A	STE18	P18852	110 aa		11.27	□□□□□ -0.61
LSM3	YLR438C-A	GIT1	P25346	518 aa		11.27	□□□□□ -0.61
LSM3	YLR438C-A	BOS1	P25385	244 aa		11.27	□□□□□ -0.61
LSM3	YLR438C-A	VPS17	P32913	551 aa		11.27	□□□□□ -0.61
LSM3	YLR438C-A	ANR2	P36090	516 aa	Predicted RBP	11.27	□□□□□ -0.61
LSM3	YLR438C-A	THI2	P38141	450 aa		11.27	□□□□□ -0.61
LSM3	YLR438C-A	PCL6	P40038	420 aa		11.27	□□□□□ -0.61
LSM3	YLR438C-A	SLZ1	P40167	298 aa		11.27	□□□□□ -0.61
LSM3	YLR438C-A	SOK2	P53438	785 aa	Predicted RBP	11.27	□□□□□ -0.61
LSM3	YLR438C-A	MRX8	Q05473	314 aa		11.27	□□□□□ -0.61
LSM3	YLR438C-A	GPN3	Q06543	272 aa		11.27	□□□□□ -0.61

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