RNA–Protein interactions for RNA: YLR268W

SEC22, Transcript of R-SNARE protein, yeastyeast

Gene SEC22, Length 645 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC22YLR268W DAL80P26343 269 aa1.59□□□□□ -2.15
SEC22YLR268W MRPL40P36534 297 aa1.59□□□□□ -2.15
SEC22YLR268W GDS1P41913 522 aa1.59□□□□□ -2.15
SEC22YLR268W KEL2P50090 882 aa1.59□□□□□ -2.15
SEC22YLR268W SPO19Q03029 223 aa1.59□□□□□ -2.15
SEC22YLR268W YLR446WQ06204 433 aa1.59□□□□□ -2.15
SEC22YLR268W YOR292CQ08743 309 aa1.59□□□□□ -2.15
SEC22YLR268W RRP42Q12277 265 aaPredicted RBP1.59□□□□□ -2.15
SEC22YLR268W YIL002W-AQ3E7Z5 69 aa1.59□□□□□ -2.15
SEC22YLR268W YPR096CO13587 100 aa1.58□□□□□ -2.16
SEC22YLR268W RPL31AP0C2H8 113 aaKnown RBP1.58□□□□□ -2.16
SEC22YLR268W CUP2P15315 225 aa1.58□□□□□ -2.16
SEC22YLR268W HPR1P17629 752 aaKnown RBP1.58□□□□□ -2.16
SEC22YLR268W GPI12P23797 304 aa1.58□□□□□ -2.16
SEC22YLR268W RPB9P27999 122 aa1.58□□□□□ -2.16
SEC22YLR268W VPH2P32341 215 aa1.58□□□□□ -2.16
SEC22YLR268W MRPL6P32904 214 aa1.58□□□□□ -2.16
SEC22YLR268W AST1P35183 429 aa1.58□□□□□ -2.16
SEC22YLR268W GPX1P36014 167 aa1.58□□□□□ -2.16
SEC22YLR268W TPO5P36029 618 aa1.58□□□□□ -2.16
SEC22YLR268W YPC1P38298 316 aa1.58□□□□□ -2.16
SEC22YLR268W ASP1P38986 381 aaPredicted RBP1.58□□□□□ -2.16
SEC22YLR268W YIA6P40556 373 aa1.58□□□□□ -2.16
SEC22YLR268W GCD14P46959 383 aaPredicted RBP1.58□□□□□ -2.16
SEC22YLR268W UBC13P52490 153 aa1.58□□□□□ -2.16
SEC22YLR268W PNC1P53184 216 aaKnown RBP1.58□□□□□ -2.16
SEC22YLR268W ZRG17P53735 605 aa1.58□□□□□ -2.16
SEC22YLR268W YNL260CP53846 198 aa1.58□□□□□ -2.16
SEC22YLR268W YPL077CQ02831 240 aa1.58□□□□□ -2.16
SEC22YLR268W ECM18Q04623 453 aa1.58□□□□□ -2.16
SEC22YLR268W ERP3Q12403 225 aa1.58□□□□□ -2.16
SEC22YLR268W YPR064WQ12492 139 aa1.58□□□□□ -2.16
SEC22YLR268W DBP3P20447 523 aaKnown RBP1.57□□□□□ -2.16
SEC22YLR268W CSM1P25651 190 aa1.57□□□□□ -2.16
SEC22YLR268W AGA2P32781 87 aa1.57□□□□□ -2.16
SEC22YLR268W CDC13P32797 924 aaKnown RBP1.57□□□□□ -2.16
SEC22YLR268W IMP3P32899 183 aaPredicted RBP1.57□□□□□ -2.16
SEC22YLR268W CSE1P33307 960 aa1.57□□□□□ -2.16
SEC22YLR268W YKL063CP35725 167 aa1.57□□□□□ -2.16
SEC22YLR268W PRY2P36110 329 aa1.57□□□□□ -2.16
SEC22YLR268W RPC37P36121 282 aa1.57□□□□□ -2.16
SEC22YLR268W AIM29P36154 155 aa1.57□□□□□ -2.16
SEC22YLR268W RRF1P38771 230 aa1.57□□□□□ -2.16
SEC22YLR268W TDA11P38854 504 aa1.57□□□□□ -2.16
SEC22YLR268W EDC2P40023 145 aaPredicted RBP1.57□□□□□ -2.16
SEC22YLR268W PCL7P40186 285 aa1.57□□□□□ -2.16
SEC22YLR268W YIL059CP40520 121 aa1.57□□□□□ -2.16
SEC22YLR268W COS4P43542 379 aa1.57□□□□□ -2.16
SEC22YLR268W ASG7P46993 209 aa1.57□□□□□ -2.16
SEC22YLR268W MPP10P47083 593 aaKnown RBP1.57□□□□□ -2.16
SEC22YLR268W YNL050CP53952 270 aa1.57□□□□□ -2.16
SEC22YLR268W ERV41Q04651 352 aa1.57□□□□□ -2.16
SEC22YLR268W BER1Q06688 274 aaKnown RBP1.57□□□□□ -2.16
SEC22YLR268W YLR413WQ06689 675 aa1.57□□□□□ -2.16
SEC22YLR268W ASR1Q06834 288 aa1.57□□□□□ -2.16
SEC22YLR268W ATP6P00854 259 aa1.56□□□□□ -2.16
SEC22YLR268W ILV1P00927 576 aaKnown RBP1.56□□□□□ -2.16
SEC22YLR268W GAL7P08431 366 aa1.56□□□□□ -2.16
SEC22YLR268W GCG1P32656 232 aaKnown RBP1.56□□□□□ -2.16
SEC22YLR268W YBR062CP38239 180 aa1.56□□□□□ -2.16
SEC22YLR268W PEX18P38855 283 aa1.56□□□□□ -2.16
SEC22YLR268W VPS45P38932 577 aa1.56□□□□□ -2.16
SEC22YLR268W VAB2P40003 282 aa1.56□□□□□ -2.16
SEC22YLR268W AGP3P43548 558 aa1.56□□□□□ -2.16
SEC22YLR268W CPR7P47103 393 aa1.56□□□□□ -2.16
SEC22YLR268W GTO1P48239 356 aa1.56□□□□□ -2.16
SEC22YLR268W LIF1P53150 421 aa1.56□□□□□ -2.16
SEC22YLR268W YNL040WP53960 456 aaPredicted RBP1.56□□□□□ -2.16
SEC22YLR268W ERV25P54837 211 aaKnown RBP1.56□□□□□ -2.16
SEC22YLR268W EGD1Q02642 157 aaKnown RBP1.56□□□□□ -2.16
SEC22YLR268W CSI1Q04368 295 aa1.56□□□□□ -2.16
SEC22YLR268W ARC18Q05933 178 aaKnown RBP1.56□□□□□ -2.16
SEC22YLR268W PEX30Q06169 523 aa1.56□□□□□ -2.16
SEC22YLR268W BCP1Q06338 283 aa1.56□□□□□ -2.16
SEC22YLR268W GPN3Q06543 272 aa1.56□□□□□ -2.16
SEC22YLR268W YPL278CQ08990 100 aa1.56□□□□□ -2.16
SEC22YLR268W POM33Q12164 279 aa1.56□□□□□ -2.16
SEC22YLR268W PRP46Q12417 451 aaPredicted RBP1.56□□□□□ -2.16
SEC22YLR268W MRPL23Q12487 163 aaPredicted RBP1.56□□□□□ -2.16
SEC22YLR268W TFS1P14306 219 aa1.55□□□□□ -2.16
SEC22YLR268W SUA5P32579 426 aa1.55□□□□□ -2.16
SEC22YLR268W HIS2P38635 335 aa1.55□□□□□ -2.16
SEC22YLR268W KRE29P40026 464 aa1.55□□□□□ -2.16
SEC22YLR268W YIL012WP40551 113 aa1.55□□□□□ -2.16
SEC22YLR268W YFL064CP43540 174 aa1.55□□□□□ -2.16
SEC22YLR268W PRP24P49960 444 aaKnown RBP1.55□□□□□ -2.16
SEC22YLR268W YPT32P51996 222 aaKnown RBP1.55□□□□□ -2.16
SEC22YLR268W YGL185CP53100 379 aa1.55□□□□□ -2.16
SEC22YLR268W ACT1P60010 375 aaKnown RBP1.55□□□□□ -2.16
SEC22YLR268W YDR222WQ04925 415 aa1.55□□□□□ -2.16
SEC22YLR268W DPP1Q05521 289 aa1.55□□□□□ -2.16
SEC22YLR268W TAZ1Q06510 381 aa1.55□□□□□ -2.16
SEC22YLR268W SGT2Q12118 346 aaKnown RBP1.55□□□□□ -2.16
SEC22YLR268W FRS2P15625 503 aaKnown RBP1.54□□□□□ -2.16
SEC22YLR268W CDC42P19073 191 aa1.54□□□□□ -2.16
SEC22YLR268W DAL81P21657 970 aa1.54□□□□□ -2.16
SEC22YLR268W MEK1P24719 497 aaPredicted RBP1.54□□□□□ -2.16
SEC22YLR268W ICL1P28240 557 aaPredicted RBP1.54□□□□□ -2.16
SEC22YLR268W IMP1P28627 190 aa1.54□□□□□ -2.16
SEC22YLR268W AEP1P32493 518 aa1.54□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 24.7 ms