RNA–Protein interactions for RNA: YJL041W

NSP1, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NSP1, Length 2,472 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NSP1YJL041W YHL044WP38727 235 aa3.26□□□□□ -1.89
NSP1YJL041W YHR035WP38769 630 aa3.26□□□□□ -1.89
NSP1YJL041W YHR054CP38780 354 aa3.26□□□□□ -1.89
NSP1YJL041W RPF1P38805 295 aaKnown RBP3.26□□□□□ -1.89
NSP1YJL041W PEX7P39108 375 aa3.26□□□□□ -1.89
NSP1YJL041W YMR147WP40218 223 aaKnown RBP3.26□□□□□ -1.89
NSP1YJL041W YJL068CP40363 299 aa3.26□□□□□ -1.89
NSP1YJL041W LAS21P40367 830 aa3.26□□□□□ -1.89
NSP1YJL041W LCB2P40970 561 aa3.26□□□□□ -1.89
NSP1YJL041W BAP3P41815 604 aa3.26□□□□□ -1.89
NSP1YJL041W YFL040WP43562 540 aa3.26□□□□□ -1.89
NSP1YJL041W AMA1P50082 593 aa3.26□□□□□ -1.89
NSP1YJL041W MRK1P50873 501 aa3.26□□□□□ -1.89
NSP1YJL041W EXG2P52911 562 aa3.26□□□□□ -1.89
NSP1YJL041W GPG1P53130 126 aa3.26□□□□□ -1.89
NSP1YJL041W MKC7P53379 596 aa3.26□□□□□ -1.89
NSP1YJL041W NRD1P53617 575 aaKnown RBP RIP-Chip data3.26□□□□□ -1.89not detected
NSP1YJL041W LSM7P53905 115 aaKnown RBP3.26□□□□□ -1.89
NSP1YJL041W CNL1Q06333 122 aa3.26□□□□□ -1.89
NSP1YJL041W CYK3Q07533 885 aa3.26□□□□□ -1.89
NSP1YJL041W ATG10Q07879 167 aa3.26□□□□□ -1.89
NSP1YJL041W PAU23Q07987 124 aa3.26□□□□□ -1.89
NSP1YJL041W BTS1Q12051 335 aa3.26□□□□□ -1.89
NSP1YJL041W MSL5Q12186 476 aaKnown RBP RIP-Chip data3.26□□□□□ -1.89not detected
NSP1YJL041W PAU17Q12370 124 aa3.26□□□□□ -1.89
NSP1YJL041W RPL13AQ12690 199 aaPredicted RBP3.26□□□□□ -1.89
NSP1YJL041W RPS9AO13516 197 aaKnown RBP3.25□□□□□ -1.89
NSP1YJL041W CAR1P00812 333 aaKnown RBP3.25□□□□□ -1.89
NSP1YJL041W BI2P03873 423 aa3.25□□□□□ -1.89
NSP1YJL041W HIS5P07172 385 aa3.25□□□□□ -1.89
NSP1YJL041W PUT2P07275 575 aa3.25□□□□□ -1.89
NSP1YJL041W BUD5P25300 642 aaPredicted RBP3.25□□□□□ -1.89
NSP1YJL041W YCL002CP25565 263 aa3.25□□□□□ -1.89
NSP1YJL041W BUB2P26448 306 aaPredicted RBP3.25□□□□□ -1.89
NSP1YJL041W PPA2P28239 310 aa3.25□□□□□ -1.89
NSP1YJL041W CAP1P28495 268 aaKnown RBP3.25□□□□□ -1.89
NSP1YJL041W CYS3P31373 394 aaKnown RBP3.25□□□□□ -1.89
NSP1YJL041W AFG1P32317 509 aa3.25□□□□□ -1.89
NSP1YJL041W HOG1P32485 435 aa3.25□□□□□ -1.89
NSP1YJL041W NRP1P32770 719 aaKnown RBP RIP-Chip data3.25□□□□□ -1.89not detected
NSP1YJL041W LHP1P33399 275 aaKnown RBP3.25□□□□□ -1.89
NSP1YJL041W PHO90P39535 881 aa3.25□□□□□ -1.89
NSP1YJL041W LSM5P40089 93 aaKnown RBP3.25□□□□□ -1.89
NSP1YJL041W RRG9P40156 214 aa3.25□□□□□ -1.89
NSP1YJL041W IMA5P40884 581 aa3.25□□□□□ -1.89
NSP1YJL041W OYE3P41816 400 aaPredicted RBP3.25□□□□□ -1.89
NSP1YJL041W GDS1P41913 522 aa3.25□□□□□ -1.89
NSP1YJL041W QRI7P43122 407 aa3.25□□□□□ -1.89
NSP1YJL041W YJR111CP47148 283 aaKnown RBP3.25□□□□□ -1.89
NSP1YJL041W YPR003CP53394 754 aa3.25□□□□□ -1.89
NSP1YJL041W RSM23Q01163 450 aa3.25□□□□□ -1.89
NSP1YJL041W STD1Q02794 444 aa3.25□□□□□ -1.89
NSP1YJL041W LRS4Q04087 347 aaKnown RBP3.25□□□□□ -1.89
NSP1YJL041W YHC1Q05900 231 aaKnown RBP3.25□□□□□ -1.89
NSP1YJL041W SHS1Q07657 551 aa3.25□□□□□ -1.89
NSP1YJL041W GUD1Q07729 489 aa3.25□□□□□ -1.89
NSP1YJL041W CWC2Q12046 339 aaPredicted RBP3.25□□□□□ -1.89
NSP1YJL041W YLR118CQ12354 227 aa3.25□□□□□ -1.89
NSP1YJL041W TFC7Q12415 435 aa3.25□□□□□ -1.89
NSP1YJL041W FSH3Q99369 266 aa3.25□□□□□ -1.89
NSP1YJL041W RAD6P06104 172 aa3.25□□□□□ -1.89
NSP1YJL041W CYC3P06182 269 aa3.25□□□□□ -1.89
NSP1YJL041W YBR121C-AP0C5L4 52 aa3.25□□□□□ -1.89
NSP1YJL041W TIR1P10863 254 aa3.25□□□□□ -1.89
NSP1YJL041W SST2P11972 698 aaKnown RBP3.25□□□□□ -1.89
NSP1YJL041W BGL2P15703 313 aaKnown RBP3.25□□□□□ -1.89
NSP1YJL041W YCR015CP25616 317 aa3.25□□□□□ -1.89
NSP1YJL041W MRP49P32388 137 aa3.25□□□□□ -1.89
NSP1YJL041W AIM26P32858 118 aa3.25□□□□□ -1.89
NSP1YJL041W SKT5P34226 696 aa3.25□□□□□ -1.89
NSP1YJL041W YBR013CP38215 129 aa3.25□□□□□ -1.89
NSP1YJL041W MUP3P38734 546 aa3.25□□□□□ -1.89
NSP1YJL041W PPE1P38796 400 aa3.25□□□□□ -1.89
NSP1YJL041W SFB3P38810 929 aa3.25□□□□□ -1.89
NSP1YJL041W BDH1P39714 382 aa3.25□□□□□ -1.89
NSP1YJL041W YIL067CP40514 678 aa3.25□□□□□ -1.89
NSP1YJL041W ALY2P47029 1046 aa3.25□□□□□ -1.89
NSP1YJL041W DAN1P47178 298 aa3.25□□□□□ -1.89
NSP1YJL041W RTT102P53330 157 aa3.25□□□□□ -1.89
NSP1YJL041W DIA1P54005 336 aa3.25□□□□□ -1.89
NSP1YJL041W MAK3Q03503 176 aa3.25□□□□□ -1.89
NSP1YJL041W RRP45Q05636 305 aaKnown RBP3.25□□□□□ -1.89
NSP1YJL041W YLR456WQ06199 204 aa3.25□□□□□ -1.89
NSP1YJL041W MRX9Q07349 420 aaKnown RBP3.25□□□□□ -1.89
NSP1YJL041W ORT1Q12375 292 aa3.25□□□□□ -1.89
NSP1YJL041W WIP1Q2V2P8 89 aa3.25□□□□□ -1.89
NSP1YJL041W RIM15P43565 1770 aa3.25□□□□□ -1.89
NSP1YJL041W PHO2P07269 559 aa3.24□□□□□ -1.89
NSP1YJL041W ANB1P19211 157 aa3.24□□□□□ -1.89
NSP1YJL041W PCL2P25693 308 aa3.24□□□□□ -1.89
NSP1YJL041W OCH1P31755 480 aa3.24□□□□□ -1.89
NSP1YJL041W UGP1P32861 499 aaKnown RBP3.24□□□□□ -1.89
NSP1YJL041W UPS2P35200 230 aa3.24□□□□□ -1.89
NSP1YJL041W PTK1P36002 662 aaPredicted RBP3.24□□□□□ -1.89
NSP1YJL041W YNK1P36010 153 aaKnown RBP3.24□□□□□ -1.89
NSP1YJL041W RIM2P38127 377 aa3.24□□□□□ -1.89
NSP1YJL041W TAE1P38340 232 aa3.24□□□□□ -1.89
NSP1YJL041W WSC4P38739 605 aa3.24□□□□□ -1.89
NSP1YJL041W FSH1P38777 243 aaKnown RBP3.24□□□□□ -1.89
NSP1YJL041W FET3P38993 636 aa3.24□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 48.5 ms