RNA–Protein interactions for RNA: YGR116W

SPT6, Transcript of Nucleosome remodeling protein, yeastyeast

Gene SPT6, Length 4,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT6YGR116W MRPL9P31334 269 aa3.42□□□□□ -1.86
SPT6YGR116W BNA4P38169 460 aa3.42□□□□□ -1.86
SPT6YGR116W PHO90P39535 881 aa3.42□□□□□ -1.86
SPT6YGR116W FAU1P40099 211 aa3.42□□□□□ -1.86
SPT6YGR116W COS12P53053 380 aa3.42□□□□□ -1.86
SPT6YGR116W PNC1P53184 216 aaKnown RBP3.42□□□□□ -1.86
SPT6YGR116W VHT1P53241 593 aa3.42□□□□□ -1.86
SPT6YGR116W BSC1Q12140 328 aa3.42□□□□□ -1.86
SPT6YGR116W FYV7Q12247 151 aa3.42□□□□□ -1.86
SPT6YGR116W AHC1Q12433 566 aa3.42□□□□□ -1.86
SPT6YGR116W Q0142Q9ZZW4 58 aa3.42□□□□□ -1.86
SPT6YGR116W TDH2P00358 332 aaKnown RBP3.41□□□□□ -1.86
SPT6YGR116W YPC1P38298 316 aa3.41□□□□□ -1.86
SPT6YGR116W BSD2P38356 321 aa3.41□□□□□ -1.86
SPT6YGR116W PUG1P40100 303 aa3.41□□□□□ -1.86
SPT6YGR116W YJR111CP47148 283 aaKnown RBP3.41□□□□□ -1.86
SPT6YGR116W ACT1P60010 375 aaKnown RBP3.41□□□□□ -1.86
SPT6YGR116W NDE2Q07500 545 aa3.41□□□□□ -1.86
SPT6YGR116W MED7Q08278 222 aa3.41□□□□□ -1.86
SPT6YGR116W PST1Q12355 444 aa3.41□□□□□ -1.86
SPT6YGR116W TRP4P07285 380 aaPredicted RBP3.41□□□□□ -1.86
SPT6YGR116W FLO10P36170 1169 aa3.41□□□□□ -1.86
SPT6YGR116W AXL2P38928 823 aa3.41□□□□□ -1.86
SPT6YGR116W UIP3P39547 235 aa3.41□□□□□ -1.86
SPT6YGR116W PMT6P42934 759 aa3.41□□□□□ -1.86
SPT6YGR116W GAT1P43574 510 aa3.41□□□□□ -1.86
SPT6YGR116W YGR079WP53249 370 aa3.41□□□□□ -1.86
SPT6YGR116W SLX9P53251 210 aaPredicted RBP3.41□□□□□ -1.86
SPT6YGR116W YDC1Q02896 317 aa3.41□□□□□ -1.86
SPT6YGR116W HAS1Q03532 505 aaKnown RBP3.41□□□□□ -1.86
SPT6YGR116W MRX9Q07349 420 aaKnown RBP3.41□□□□□ -1.86
SPT6YGR116W YPR015CQ12531 247 aa3.41□□□□□ -1.86
SPT6YGR116W ECM29P38737 1868 aa3.41□□□□□ -1.86
SPT6YGR116W SOD2P00447 233 aa3.41□□□□□ -1.86
SPT6YGR116W CPA1P07258 411 aaKnown RBP3.41□□□□□ -1.86
SPT6YGR116W TY1A-LR4P0C2I8 440 aaKnown RBP3.41□□□□□ -1.86
SPT6YGR116W YOL162WP0CF19 215 aa3.41□□□□□ -1.86
SPT6YGR116W TY1A-DR6P0CX70 440 aa3.41□□□□□ -1.86
SPT6YGR116W TY1A-ER1P0CX71 440 aa3.41□□□□□ -1.86
SPT6YGR116W TY1A-LR2P0CX72 440 aa3.41□□□□□ -1.86
SPT6YGR116W TY1A-PLP0CX73 440 aa3.41□□□□□ -1.86
SPT6YGR116W TY1A-JR1P0CX74 440 aa3.41□□□□□ -1.86
SPT6YGR116W TY1A-LR3P0CX75 440 aa3.41□□□□□ -1.86
SPT6YGR116W TY1A-ML2P0CX76 440 aa3.41□□□□□ -1.86
SPT6YGR116W DPM1P14020 267 aaKnown RBP3.41□□□□□ -1.86
SPT6YGR116W RPB3P16370 318 aaKnown RBP3.41□□□□□ -1.86
SPT6YGR116W FUN14P18411 198 aa3.41□□□□□ -1.86
SPT6YGR116W GAP1P19145 602 aaPredicted RBP3.41□□□□□ -1.86
SPT6YGR116W MKK1P32490 508 aa3.41□□□□□ -1.86
SPT6YGR116W TSA1P34760 196 aaKnown RBP3.41□□□□□ -1.86
SPT6YGR116W PAN3P36102 679 aaPredicted RBP3.41□□□□□ -1.86
SPT6YGR116W SLI15P38283 698 aa3.41□□□□□ -1.86
SPT6YGR116W TOK1P40310 691 aa3.41□□□□□ -1.86
SPT6YGR116W GLC8P41818 229 aa3.41□□□□□ -1.86
SPT6YGR116W MEP3P53390 489 aa3.41□□□□□ -1.86
SPT6YGR116W YKR011CQ02209 353 aa3.41□□□□□ -1.86
SPT6YGR116W CUE4Q04201 117 aaPredicted RBP3.41□□□□□ -1.86
SPT6YGR116W YMR252CQ04814 134 aa3.41□□□□□ -1.86
SPT6YGR116W MRI1Q06489 411 aaKnown RBP3.41□□□□□ -1.86
SPT6YGR116W GRC3Q07845 632 aa3.41□□□□□ -1.86
SPT6YGR116W YOR385WQ08909 290 aa3.41□□□□□ -1.86
SPT6YGR116W TY1A-GR1Q12085 440 aa3.41□□□□□ -1.86
SPT6YGR116W PEX11Q12462 236 aa3.41□□□□□ -1.86
SPT6YGR116W YPR145C-AQ2V2P0 78 aa3.41□□□□□ -1.86
SPT6YGR116W YJR112W-AQ3E743 109 aa3.41□□□□□ -1.86
SPT6YGR116W YGR161W-CQ3E744 92 aa3.41□□□□□ -1.86
SPT6YGR116W TY1A-PR3Q6Q5H1 440 aaKnown RBP3.41□□□□□ -1.86
SPT6YGR116W TY1A-OLQ92392 440 aaKnown RBP3.41□□□□□ -1.86
SPT6YGR116W STE7P06784 515 aa3.4□□□□□ -1.86
SPT6YGR116W SEC22P22214 214 aa3.4□□□□□ -1.86
SPT6YGR116W PRE9P23638 258 aaKnown RBP3.4□□□□□ -1.86
SPT6YGR116W KRR1P25586 316 aaPredicted RBP3.4□□□□□ -1.86
SPT6YGR116W INM1P38710 295 aa3.4□□□□□ -1.86
SPT6YGR116W PCL5P38794 229 aa3.4□□□□□ -1.86
SPT6YGR116W RPL13BP40212 199 aaKnown RBP3.4□□□□□ -1.86
SPT6YGR116W SPO74P45819 413 aa3.4□□□□□ -1.86
SPT6YGR116W RPA34P47006 233 aaPredicted RBP3.4□□□□□ -1.86
SPT6YGR116W YGL117WP53133 265 aa3.4□□□□□ -1.86
SPT6YGR116W NSA1P53136 463 aaPredicted RBP3.4□□□□□ -1.86
SPT6YGR116W HST3P53687 447 aa3.4□□□□□ -1.86
SPT6YGR116W PIR3Q03180 325 aa3.4□□□□□ -1.86
SPT6YGR116W YDR387CQ04162 555 aa3.4□□□□□ -1.86
SPT6YGR116W RTT103Q05543 409 aa3.4□□□□□ -1.86
SPT6YGR116W YOR378WQ08902 515 aa3.4□□□□□ -1.86
SPT6YGR116W LEA1Q08963 238 aaPredicted RBP3.4□□□□□ -1.86
SPT6YGR116W RAD28Q12021 506 aa3.4□□□□□ -1.86
SPT6YGR116W RPL13AQ12690 199 aaPredicted RBP3.4□□□□□ -1.86
SPT6YGR116W MEX67Q99257 599 aaKnown RBP3.4□□□□□ -1.86
SPT6YGR116W KIN28P06242 306 aa3.4□□□□□ -1.86
SPT6YGR116W PUT3P25502 979 aaPredicted RBP3.4□□□□□ -1.86
SPT6YGR116W IDH2P28241 369 aaKnown RBP3.4□□□□□ -1.86
SPT6YGR116W MET22P32179 357 aa3.4□□□□□ -1.86
SPT6YGR116W SPT10P35208 640 aa3.4□□□□□ -1.86
SPT6YGR116W DCW1P36091 449 aa3.4□□□□□ -1.86
SPT6YGR116W SDH4P37298 181 aa3.4□□□□□ -1.86
SPT6YGR116W YHL026CP38740 315 aa3.4□□□□□ -1.86
SPT6YGR116W TRR2P38816 342 aa3.4□□□□□ -1.86
SPT6YGR116W YIL108WP40483 696 aaKnown RBP3.4□□□□□ -1.86
SPT6YGR116W PAM16P42949 149 aa3.4□□□□□ -1.86
SPT6YGR116W NIT2P47016 307 aa3.4□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 29.6 ms