RNA–Protein interactions for RNA: YFR004W

RPN11, Transcript of Metalloprotease subunit of 19S regulatory particle, yeastyeast

Gene RPN11, Length 921 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN11YFR004W YGR012WP53206 393 aa5.5□□□□□ -1.53
RPN11YFR004W BUD9P53226 547 aa5.5□□□□□ -1.53
RPN11YFR004W ERV29P53337 310 aa5.5□□□□□ -1.53
RPN11YFR004W BUR2Q05949 395 aa5.5□□□□□ -1.53
RPN11YFR004W RGC1Q06108 1083 aaKnown RBP5.5□□□□□ -1.53
RPN11YFR004W GPN3Q06543 272 aa5.5□□□□□ -1.53
RPN11YFR004W MDM32Q12171 622 aa5.5□□□□□ -1.53
RPN11YFR004W TIR4Q12218 487 aaPredicted RBP5.5□□□□□ -1.53
RPN11YFR004W TY1A-NL1Q12391 440 aaKnown RBP5.5□□□□□ -1.53
RPN11YFR004W RTN2Q12443 393 aa5.5□□□□□ -1.53
RPN11YFR004W YBR298C-AQ8TGK4 73 aa5.5□□□□□ -1.53
RPN11YFR004W FAS1P07149 2051 aaKnown RBP5.5□□□□□ -1.53
RPN11YFR004W ERD1P16151 362 aa5.49□□□□□ -1.53
RPN11YFR004W STF2P16965 84 aa5.49□□□□□ -1.53
RPN11YFR004W YCR100CP25606 316 aa5.49□□□□□ -1.53
RPN11YFR004W HSP30P25619 332 aa5.49□□□□□ -1.53
RPN11YFR004W MCM10P32354 571 aa5.49□□□□□ -1.53
RPN11YFR004W HYM1P32464 399 aa5.49□□□□□ -1.53
RPN11YFR004W SRB5P32585 307 aa5.49□□□□□ -1.53
RPN11YFR004W ORC2P32833 620 aa5.49□□□□□ -1.53
RPN11YFR004W SUI1P32911 108 aaKnown RBP5.49□□□□□ -1.53
RPN11YFR004W SUR1P33300 382 aa5.49□□□□□ -1.53
RPN11YFR004W MIA40P36046 403 aa5.49□□□□□ -1.53
RPN11YFR004W SNU114P36048 1008 aaKnown RBP5.49□□□□□ -1.53
RPN11YFR004W OMA1P36163 345 aa5.49□□□□□ -1.53
RPN11YFR004W MOH1P38191 138 aa5.49□□□□□ -1.53
RPN11YFR004W EHT1P38295 451 aa5.49□□□□□ -1.53
RPN11YFR004W YHR097CP38809 366 aaKnown RBP5.49□□□□□ -1.53
RPN11YFR004W HPA3P39979 161 aa5.49□□□□□ -1.53
RPN11YFR004W YNL195CP40168 261 aa5.49□□□□□ -1.53
RPN11YFR004W MDV1P47025 714 aa5.49□□□□□ -1.53
RPN11YFR004W IBA57P47158 497 aa5.49□□□□□ -1.53
RPN11YFR004W IMO32P53219 342 aa5.49□□□□□ -1.53
RPN11YFR004W MRPL50P53724 139 aa5.49□□□□□ -1.53
RPN11YFR004W PGA1P53896 198 aa5.49□□□□□ -1.53
RPN11YFR004W YKR011CQ02209 353 aa5.49□□□□□ -1.53
RPN11YFR004W TPP1Q03796 238 aa5.49□□□□□ -1.53
RPN11YFR004W MMT2Q08970 484 aa5.49□□□□□ -1.53
RPN11YFR004W PUS9Q12069 462 aa5.49□□□□□ -1.53
RPN11YFR004W TPO4Q12256 659 aa5.49□□□□□ -1.53
RPN11YFR004W YOL114CQ12322 202 aa5.49□□□□□ -1.53
RPN11YFR004W NOP56Q12460 504 aaKnown RBP RIP-Chip data5.49□□□□□ -1.53not detected
RPN11YFR004W PCL9Q12477 304 aa5.49□□□□□ -1.53
RPN11YFR004W YLR099W-AQ3E798 87 aa5.49□□□□□ -1.53
RPN11YFR004W YOR019WQ99248 730 aa5.49□□□□□ -1.53
RPN11YFR004W DIF1O13577 133 aa5.48□□□□□ -1.53
RPN11YFR004W RPS18AP0CX55 146 aaKnown RBP5.48□□□□□ -1.53
RPN11YFR004W RPS18BP0CX56 146 aaPredicted RBP5.48□□□□□ -1.53
RPN11YFR004W RPB5P20434 215 aa5.48□□□□□ -1.53
RPN11YFR004W APN1P22936 367 aa5.48□□□□□ -1.53
RPN11YFR004W MGR1P25573 417 aa5.48□□□□□ -1.53
RPN11YFR004W NAM9P27929 486 aa5.48□□□□□ -1.53
RPN11YFR004W SNC1P31109 117 aa5.48□□□□□ -1.53
RPN11YFR004W HOM6P31116 359 aaKnown RBP5.48□□□□□ -1.53
RPN11YFR004W HIS7P33734 552 aaKnown RBP5.48□□□□□ -1.53
RPN11YFR004W JEN1P36035 616 aa5.48□□□□□ -1.53
RPN11YFR004W DOA1P36037 715 aa5.48□□□□□ -1.53
RPN11YFR004W YBR242WP38331 238 aa5.48□□□□□ -1.53
RPN11YFR004W GPI16P38875 610 aa5.48□□□□□ -1.53
RPN11YFR004W CHL4P38907 458 aa5.48□□□□□ -1.53
RPN11YFR004W MLH1P38920 769 aa5.48□□□□□ -1.53
RPN11YFR004W CIN1P40987 1014 aa5.48□□□□□ -1.53
RPN11YFR004W MNN5P46982 586 aa5.48□□□□□ -1.53
RPN11YFR004W PUS4P48567 403 aaKnown RBP5.48□□□□□ -1.53
RPN11YFR004W YGR250CP53316 781 aaKnown RBP5.48□□□□□ -1.53
RPN11YFR004W LSM7P53905 115 aaKnown RBP5.48□□□□□ -1.53
RPN11YFR004W RPL6AQ02326 176 aaKnown RBP5.48□□□□□ -1.53
RPN11YFR004W REC102Q02721 264 aa5.48□□□□□ -1.53
RPN11YFR004W YDR541CQ03049 344 aa5.48□□□□□ -1.53
RPN11YFR004W PLB2Q03674 706 aa5.48□□□□□ -1.53
RPN11YFR004W MSS11Q03825 758 aa5.48□□□□□ -1.53
RPN11YFR004W PLM2Q04383 521 aa5.48□□□□□ -1.53
RPN11YFR004W TDA6Q06466 467 aa5.48□□□□□ -1.53
RPN11YFR004W ARV1Q06541 321 aa5.48□□□□□ -1.53
RPN11YFR004W IPK1Q06667 281 aa5.48□□□□□ -1.53
RPN11YFR004W XYL2Q07993 356 aa5.48□□□□□ -1.53
RPN11YFR004W FDH1Q08911 376 aa5.48□□□□□ -1.53
RPN11YFR004W AKR2Q12013 749 aa5.48□□□□□ -1.53
RPN11YFR004W YKL033W-AQ86ZR7 236 aa5.48□□□□□ -1.53
RPN11YFR004W Q0142Q9ZZW4 58 aa5.48□□□□□ -1.53
RPN11YFR004W RAD52P06778 471 aaKnown RBP5.47□□□□□ -1.53
RPN11YFR004W CBS1P14066 229 aa5.47□□□□□ -1.53
RPN11YFR004W YCL042WP25572 119 aa5.47□□□□□ -1.53
RPN11YFR004W YCR102CP25608 368 aa5.47□□□□□ -1.53
RPN11YFR004W TMA19P35691 167 aaKnown RBP5.47□□□□□ -1.53
RPN11YFR004W MNL1P38888 796 aa5.47□□□□□ -1.53
RPN11YFR004W PHB1P40961 287 aa5.47□□□□□ -1.53
RPN11YFR004W BNA2P47125 453 aa5.47□□□□□ -1.53
RPN11YFR004W RPS12P48589 143 aaKnown RBP5.47□□□□□ -1.53
RPN11YFR004W COS10P52924 374 aa5.47□□□□□ -1.53
RPN11YFR004W TPN1P53099 579 aa5.47□□□□□ -1.53
RPN11YFR004W LCL3P53153 274 aa5.47□□□□□ -1.53
RPN11YFR004W MNT4P53745 580 aa5.47□□□□□ -1.53
RPN11YFR004W TDA1Q03533 586 aa5.47□□□□□ -1.53
RPN11YFR004W INP1Q03694 420 aa5.47□□□□□ -1.53
RPN11YFR004W HLR1Q04429 423 aa5.47□□□□□ -1.53
RPN11YFR004W YMR252CQ04814 134 aa5.47□□□□□ -1.53
RPN11YFR004W PHO92Q06390 306 aa5.47□□□□□ -1.53
RPN11YFR004W YDL218WQ07629 317 aa5.47□□□□□ -1.53
RPN11YFR004W CRT10Q08226 957 aa5.47□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 20.8 ms