RNA–Protein interactions for RNA: YDL185W

VMA1, Transcript of Subunit A of the V1 peripheral membrane domain of V-ATPase, yeastyeast

Gene VMA1, Length 3,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA1YDL185W MSK1P32048 576 aa3.72□□□□□ -1.81
VMA1YDL185W MF(ALPHA)2P32435 120 aa3.72□□□□□ -1.81
VMA1YDL185W NTF2P33331 125 aaKnown RBP3.72□□□□□ -1.81
VMA1YDL185W COS9P36034 407 aa3.72□□□□□ -1.81
VMA1YDL185W TCD2P36101 447 aaKnown RBP3.72□□□□□ -1.81
VMA1YDL185W PAU24P38155 120 aa3.72□□□□□ -1.81
VMA1YDL185W BMT2P38278 337 aa3.72□□□□□ -1.81
VMA1YDL185W PAC1P39946 494 aaKnown RBP3.72□□□□□ -1.81
VMA1YDL185W YER158CP40095 573 aa3.72□□□□□ -1.81
VMA1YDL185W FMP10P40098 244 aa3.72□□□□□ -1.81
VMA1YDL185W YIL165CP40446 119 aa3.72□□□□□ -1.81
VMA1YDL185W IDP2P41939 412 aa3.72□□□□□ -1.81
VMA1YDL185W AAH1P53909 347 aa3.72□□□□□ -1.81
VMA1YDL185W YSA1Q01976 231 aa3.72□□□□□ -1.81
VMA1YDL185W YDR415CQ04033 374 aaPredicted RBP3.72□□□□□ -1.81
VMA1YDL185W UTP15Q04305 513 aaKnown RBP3.72□□□□□ -1.81
VMA1YDL185W RNH202Q05635 350 aa3.72□□□□□ -1.81
VMA1YDL185W HBT1Q07653 1046 aaKnown RBP3.72□□□□□ -1.81
VMA1YDL185W TFC7Q12415 435 aa3.72□□□□□ -1.81
VMA1YDL185W YKL033W-AQ86ZR7 236 aa3.72□□□□□ -1.81
VMA1YDL185W CDC7P06243 507 aa3.72□□□□□ -1.81
VMA1YDL185W PHO2P07269 559 aa3.72□□□□□ -1.81
VMA1YDL185W FBP1P09201 348 aa3.72□□□□□ -1.81
VMA1YDL185W PRE9P23638 258 aaKnown RBP3.72□□□□□ -1.81
VMA1YDL185W YEF1P32622 495 aa3.72□□□□□ -1.81
VMA1YDL185W ACA1P39970 489 aa3.72□□□□□ -1.81
VMA1YDL185W SLZ1P40167 298 aa3.72□□□□□ -1.81
VMA1YDL185W GAT1P43574 510 aa3.72□□□□□ -1.81
VMA1YDL185W DLD2P46681 530 aaKnown RBP3.72□□□□□ -1.81
VMA1YDL185W MPA43P53583 542 aaPredicted RBP3.72□□□□□ -1.81
VMA1YDL185W NRK1P53915 240 aa3.72□□□□□ -1.81
VMA1YDL185W YDR132CQ03900 495 aa3.72□□□□□ -1.81
VMA1YDL185W TY1A-DR2Q03964 440 aaKnown RBP3.72□□□□□ -1.81
VMA1YDL185W TY1A-MR1Q04215 440 aa3.72□□□□□ -1.81
VMA1YDL185W SPG3Q04398 127 aaPredicted RBP3.72□□□□□ -1.81
VMA1YDL185W AIM32Q04689 311 aa3.72□□□□□ -1.81
VMA1YDL185W IPK1Q06667 281 aa3.72□□□□□ -1.81
VMA1YDL185W DDC1Q08949 612 aa3.72□□□□□ -1.81
VMA1YDL185W TY1A-BLQ12266 440 aa3.72□□□□□ -1.81
VMA1YDL185W PHO5P00635 467 aa3.71□□□□□ -1.82
VMA1YDL185W CYT1P07143 309 aa3.71□□□□□ -1.82
VMA1YDL185W ADH3P07246 375 aaKnown RBP3.71□□□□□ -1.82
VMA1YDL185W HTS1P07263 546 aaKnown RBP3.71□□□□□ -1.82
VMA1YDL185W MET3P08536 511 aa3.71□□□□□ -1.82
VMA1YDL185W SEC59P20048 519 aa3.71□□□□□ -1.82
VMA1YDL185W SCL1P21243 252 aaKnown RBP3.71□□□□□ -1.82
VMA1YDL185W RPB10P22139 70 aa3.71□□□□□ -1.82
VMA1YDL185W PPH21P23594 369 aa3.71□□□□□ -1.82
VMA1YDL185W GPI12P23797 304 aa3.71□□□□□ -1.82
VMA1YDL185W DEG1P31115 442 aaKnown RBP3.71□□□□□ -1.82
VMA1YDL185W THI2P38141 450 aa3.71□□□□□ -1.82
VMA1YDL185W POP7P38291 140 aa3.71□□□□□ -1.82
VMA1YDL185W ALG8P40351 577 aa3.71□□□□□ -1.82
VMA1YDL185W IRC24P40580 263 aa3.71□□□□□ -1.82
VMA1YDL185W YJR124CP47159 448 aa3.71□□□□□ -1.82
VMA1YDL185W AVT4P50944 713 aa3.71□□□□□ -1.82
VMA1YDL185W YGL114WP53134 725 aa3.71□□□□□ -1.82
VMA1YDL185W TYW3P53177 273 aa3.71□□□□□ -1.82
VMA1YDL185W PAU12P53343 120 aa3.71□□□□□ -1.82
VMA1YDL185W PRM1P53835 661 aa3.71□□□□□ -1.82
VMA1YDL185W CYT2Q00873 224 aa3.71□□□□□ -1.82
VMA1YDL185W RUB1Q03919 77 aa3.71□□□□□ -1.82
VMA1YDL185W DPB4Q04603 196 aaKnown RBP3.71□□□□□ -1.82
VMA1YDL185W CRT10Q08226 957 aa3.71□□□□□ -1.82
VMA1YDL185W YGR161W-CQ3E744 92 aa3.71□□□□□ -1.82
VMA1YDL185W RPL9AP05738 191 aaKnown RBP3.71□□□□□ -1.82
VMA1YDL185W YML003WP0CF16 290 aa3.71□□□□□ -1.82
VMA1YDL185W YMC1P32331 307 aa3.71□□□□□ -1.82
VMA1YDL185W SFP1P32432 683 aa3.71□□□□□ -1.82
VMA1YDL185W PUB1P32588 453 aaKnown RBP RIP-Chip data3.71□□□□□ -1.82not detected
VMA1YDL185W EMC3P36039 253 aa3.71□□□□□ -1.82
VMA1YDL185W ADD66P36040 267 aa3.71□□□□□ -1.82
VMA1YDL185W EMC5P40540 141 aa3.71□□□□□ -1.82
VMA1YDL185W CDC1P40986 491 aa3.71□□□□□ -1.82
VMA1YDL185W MUP1P50276 574 aa3.71□□□□□ -1.82
VMA1YDL185W RPL9BP51401 191 aaKnown RBP3.71□□□□□ -1.82
VMA1YDL185W MDM34P53083 459 aa3.71□□□□□ -1.82
VMA1YDL185W MEP3P53390 489 aa3.71□□□□□ -1.82
VMA1YDL185W RIM13Q03792 727 aa3.71□□□□□ -1.82
VMA1YDL185W SEC13Q04491 297 aaKnown RBP3.71□□□□□ -1.82
VMA1YDL185W MMT2Q08970 484 aa3.71□□□□□ -1.82
VMA1YDL185W YIL134C-AQ45U18 67 aa3.71□□□□□ -1.82
VMA1YDL185W QCR7P00128 127 aa3.7□□□□□ -1.82
VMA1YDL185W TIP1P27654 210 aaPredicted RBP3.7□□□□□ -1.82
VMA1YDL185W DAL3P32459 195 aa3.7□□□□□ -1.82
VMA1YDL185W NRP1P32770 719 aaKnown RBP RIP-Chip data3.7□□□□□ -1.82not detected
VMA1YDL185W LRP1P38801 184 aaKnown RBP3.7□□□□□ -1.82
VMA1YDL185W UBA4P38820 440 aa3.7□□□□□ -1.82
VMA1YDL185W UIP3P39547 235 aa3.7□□□□□ -1.82
VMA1YDL185W FAU1P40099 211 aa3.7□□□□□ -1.82
VMA1YDL185W FAF1P40546 346 aaPredicted RBP3.7□□□□□ -1.82
VMA1YDL185W STD1Q02794 444 aa3.7□□□□□ -1.82
VMA1YDL185W YMR321CQ04898 105 aa3.7□□□□□ -1.82
VMA1YDL185W NDJ1Q12366 352 aa3.7□□□□□ -1.82
VMA1YDL185W TRM13Q12383 476 aa3.7□□□□□ -1.82
VMA1YDL185W YNR034W-AQ3E841 98 aa3.7□□□□□ -1.82
VMA1YDL185W MPD2Q99316 277 aa3.7□□□□□ -1.82
VMA1YDL185W FSH3Q99369 266 aa3.7□□□□□ -1.82
VMA1YDL185W COX3P00420 269 aa3.7□□□□□ -1.82
VMA1YDL185W COQ3P27680 312 aa3.7□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms