RNA–Protein interactions for RNA: YDL108W

KIN28, Transcript of Serine/threonine protein kinase, subunit of transcription factor TFIIH, yeastyeast

Gene KIN28, Length 921 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
KIN28YDL108W UIP3P39547 235 aa4.19□□□□□ -1.74
KIN28YDL108W CSM2P40465 213 aa4.19□□□□□ -1.74
KIN28YDL108W YIR016WP40572 265 aa4.19□□□□□ -1.74
KIN28YDL108W YGR210CP42942 411 aa4.19□□□□□ -1.74
KIN28YDL108W HOC1P47124 396 aa4.19□□□□□ -1.74
KIN28YDL108W YDL186WP48568 277 aa4.19□□□□□ -1.74
KIN28YDL108W PRP24P49960 444 aaKnown RBP4.19□□□□□ -1.74
KIN28YDL108W ABF2Q02486 183 aa4.19□□□□□ -1.74
KIN28YDL108W SMP3Q04174 516 aa4.19□□□□□ -1.74
KIN28YDL108W YDR278CQ05612 105 aa4.19□□□□□ -1.74
KIN28YDL108W MRPL51Q06090 140 aaPredicted RBP4.19□□□□□ -1.74
KIN28YDL108W PBP4Q07362 185 aaKnown RBP4.19□□□□□ -1.74
KIN28YDL108W FYV7Q12247 151 aa4.19□□□□□ -1.74
KIN28YDL108W RKM5Q12367 367 aa4.19□□□□□ -1.74
KIN28YDL108W RHO2P06781 192 aa4.18□□□□□ -1.74
KIN28YDL108W SLY1P22213 666 aa4.18□□□□□ -1.74
KIN28YDL108W PUP3P25451 205 aaKnown RBP4.18□□□□□ -1.74
KIN28YDL108W INO2P26798 304 aa4.18□□□□□ -1.74
KIN28YDL108W ACH1P32316 526 aa4.18□□□□□ -1.74
KIN28YDL108W TFC1P32367 649 aa4.18□□□□□ -1.74
KIN28YDL108W VAM7P32912 316 aa4.18□□□□□ -1.74
KIN28YDL108W YKL162CP36052 402 aa4.18□□□□□ -1.74
KIN28YDL108W ECM13P38195 257 aa4.18□□□□□ -1.74
KIN28YDL108W YBP1P38315 674 aa4.18□□□□□ -1.74
KIN28YDL108W CUE1P38428 203 aa4.18□□□□□ -1.74
KIN28YDL108W INM1P38710 295 aa4.18□□□□□ -1.74
KIN28YDL108W TRS85P46944 698 aa4.18□□□□□ -1.74
KIN28YDL108W ASG7P46993 209 aa4.18□□□□□ -1.74
KIN28YDL108W AZR1P50080 613 aa4.18□□□□□ -1.74
KIN28YDL108W COS6P53344 381 aa4.18□□□□□ -1.74
KIN28YDL108W DIG1Q03063 452 aaKnown RBP4.18□□□□□ -1.74
KIN28YDL108W YMR087WQ04299 284 aa4.18□□□□□ -1.74
KIN28YDL108W FRQ1Q06389 190 aa4.18□□□□□ -1.74
KIN28YDL108W YNG1Q08465 219 aa4.18□□□□□ -1.74
KIN28YDL108W AFT2Q08957 416 aa4.18□□□□□ -1.74
KIN28YDL108W THP3Q12049 470 aaKnown RBP4.18□□□□□ -1.74
KIN28YDL108W COX3P00420 269 aa4.17□□□□□ -1.74
KIN28YDL108W REP1P03871 373 aa4.17□□□□□ -1.74
KIN28YDL108W NAM2P11325 894 aa4.17□□□□□ -1.74
KIN28YDL108W CYS4P32582 507 aaKnown RBP4.17□□□□□ -1.74
KIN28YDL108W MYO3P36006 1272 aa4.17□□□□□ -1.74
KIN28YDL108W FMP23P38231 175 aa4.17□□□□□ -1.74
KIN28YDL108W EFM1P38732 585 aa4.17□□□□□ -1.74
KIN28YDL108W GOS1P38736 223 aa4.17□□□□□ -1.74
KIN28YDL108W RPL10P41805 221 aaKnown RBP4.17□□□□□ -1.74
KIN28YDL108W USE1P53146 245 aa4.17□□□□□ -1.74
KIN28YDL108W MMS2P53152 137 aa4.17□□□□□ -1.74
KIN28YDL108W COG5P53951 403 aa4.17□□□□□ -1.74
KIN28YDL108W DID2P69771 204 aa4.17□□□□□ -1.74
KIN28YDL108W TPS1Q00764 495 aaKnown RBP4.17□□□□□ -1.74
KIN28YDL108W SED5Q01590 340 aa4.17□□□□□ -1.74
KIN28YDL108W NUP49Q02199 472 aa4.17□□□□□ -1.74
KIN28YDL108W YMR178WQ03219 274 aaKnown RBP4.17□□□□□ -1.74
KIN28YDL108W RUB1Q03919 77 aa4.17□□□□□ -1.74
KIN28YDL108W GLO2Q05584 274 aa4.17□□□□□ -1.74
KIN28YDL108W COQ9Q05779 260 aa4.17□□□□□ -1.74
KIN28YDL108W ARC18Q05933 178 aaKnown RBP4.17□□□□□ -1.74
KIN28YDL108W LDB18Q07887 179 aa4.17□□□□□ -1.74
KIN28YDL108W APC9Q12107 265 aa4.17□□□□□ -1.74
KIN28YDL108W AIM45Q12480 344 aaKnown RBP4.17□□□□□ -1.74
KIN28YDL108W YIR021W-AQ3E739 70 aa4.17□□□□□ -1.74
KIN28YDL108W ADE4P04046 510 aaKnown RBP4.16□□□□□ -1.74
KIN28YDL108W GLN3P18494 730 aa4.16□□□□□ -1.74
KIN28YDL108W PRE7P23724 241 aaKnown RBP4.16□□□□□ -1.74
KIN28YDL108W RNA14P25298 677 aaKnown RBP4.16□□□□□ -1.74
KIN28YDL108W SLM5P25345 492 aaKnown RBP4.16□□□□□ -1.74
KIN28YDL108W OCH1P31755 480 aa4.16□□□□□ -1.74
KIN28YDL108W POP4P38336 279 aa4.16□□□□□ -1.74
KIN28YDL108W RCK1P38622 512 aa4.16□□□□□ -1.74
KIN28YDL108W LEU5P38702 357 aa4.16□□□□□ -1.74
KIN28YDL108W OXA1P39952 402 aa4.16□□□□□ -1.74
KIN28YDL108W YER079WP40052 210 aaKnown RBP4.16□□□□□ -1.74
KIN28YDL108W YMR134WP40207 237 aa4.16□□□□□ -1.74
KIN28YDL108W GAT2P40209 560 aa4.16□□□□□ -1.74
KIN28YDL108W PRE6P40303 254 aaKnown RBP4.16□□□□□ -1.74
KIN28YDL108W PDS1P40316 373 aaPredicted RBP4.16□□□□□ -1.74
KIN28YDL108W TAD2P47058 250 aa4.16□□□□□ -1.74
KIN28YDL108W MGA1P53050 456 aa4.16□□□□□ -1.74
KIN28YDL108W BIO4P53630 237 aa4.16□□□□□ -1.74
KIN28YDL108W RSM23Q01163 450 aa4.16□□□□□ -1.74
KIN28YDL108W MAK3Q03503 176 aa4.16□□□□□ -1.74
KIN28YDL108W YMR253CQ04835 414 aa4.16□□□□□ -1.74
KIN28YDL108W HEM25Q07534 307 aa4.16□□□□□ -1.74
KIN28YDL108W YOL159CQ08300 171 aa4.16□□□□□ -1.74
KIN28YDL108W ALE1Q08548 619 aa4.16□□□□□ -1.74
KIN28YDL108W HNT3Q08702 217 aa4.16□□□□□ -1.74
KIN28YDL108W HTZ1Q12692 134 aaKnown RBP4.16□□□□□ -1.74
KIN28YDL108W ILV1P00927 576 aaKnown RBP4.15□□□□□ -1.75
KIN28YDL108W RIP1P08067 215 aa4.15□□□□□ -1.75
KIN28YDL108W CLB2P24869 491 aa4.15□□□□□ -1.75
KIN28YDL108W IFM1P25038 676 aa4.15□□□□□ -1.75
KIN28YDL108W BUB2P26448 306 aaPredicted RBP4.15□□□□□ -1.75
KIN28YDL108W UBC8P28263 218 aa4.15□□□□□ -1.75
KIN28YDL108W SUA7P29055 345 aaPredicted RBP4.15□□□□□ -1.75
KIN28YDL108W NUP2P32499 720 aa4.15□□□□□ -1.75
KIN28YDL108W YEF1P32622 495 aa4.15□□□□□ -1.75
KIN28YDL108W PRX1P34227 261 aaKnown RBP4.15□□□□□ -1.75
KIN28YDL108W RPL32P38061 130 aaKnown RBP4.15□□□□□ -1.75
KIN28YDL108W PRS3P38689 320 aaKnown RBP4.15□□□□□ -1.75
KIN28YDL108W ELO1P39540 310 aa4.15□□□□□ -1.75
Retrieved 100 of 5,963 RNA–protein pairs in 249.1 ms