RNA–Protein interactions for RNA: YDL074C

BRE1, Transcript of E3 ubiquitin ligase, yeastyeast

Gene BRE1, Length 2,103 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRE1YDL074C DFG16Q99234 619 aa1.93□□□□□ -2.1
BRE1YDL074C HIS3P06633 220 aa1.93□□□□□ -2.1
BRE1YDL074C HOM3P10869 527 aa1.93□□□□□ -2.1
BRE1YDL074C NAM2P11325 894 aa1.93□□□□□ -2.1
BRE1YDL074C SEN2P16658 377 aa1.93□□□□□ -2.1
BRE1YDL074C RPA135P22138 1203 aaKnown RBP1.93□□□□□ -2.1
BRE1YDL074C YCK1P23291 538 aa1.93□□□□□ -2.1
BRE1YDL074C PUT3P25502 979 aaPredicted RBP1.93□□□□□ -2.1
BRE1YDL074C IMG1P25626 169 aa1.93□□□□□ -2.1
BRE1YDL074C ECM25P32525 599 aa1.93□□□□□ -2.1
BRE1YDL074C YEF1P32622 495 aa1.93□□□□□ -2.1
BRE1YDL074C TIM12P32830 109 aa1.93□□□□□ -2.1
BRE1YDL074C PPQ1P32945 549 aa1.93□□□□□ -2.1
BRE1YDL074C MDL1P33310 695 aa1.93□□□□□ -2.1
BRE1YDL074C WBP1P33767 430 aaKnown RBP1.93□□□□□ -2.1
BRE1YDL074C PET112P33893 541 aa1.93□□□□□ -2.1
BRE1YDL074C SPT10P35208 640 aa1.93□□□□□ -2.1
BRE1YDL074C SFK1P35735 353 aa1.93□□□□□ -2.1
BRE1YDL074C SRP102P36057 244 aaPredicted RBP1.93□□□□□ -2.1
BRE1YDL074C APL3P38065 1025 aa1.93□□□□□ -2.1
BRE1YDL074C THI2P38141 450 aa1.93□□□□□ -2.1
BRE1YDL074C MAL32P38158 584 aa1.93□□□□□ -2.1
BRE1YDL074C RRF1P38771 230 aa1.93□□□□□ -2.1
BRE1YDL074C BFR1P38934 470 aaKnown RBP RIP-Chip data1.93□□□□□ -2.1 RIP-Chip
BRE1YDL074C MSS4P38994 779 aa1.93□□□□□ -2.1
BRE1YDL074C RFC4P40339 323 aaKnown RBP1.93□□□□□ -2.1
BRE1YDL074C PKP1P40530 394 aa1.93□□□□□ -2.1
BRE1YDL074C YKE4P40544 346 aa1.93□□□□□ -2.1
BRE1YDL074C SYS1P41544 203 aa1.93□□□□□ -2.1
BRE1YDL074C SHR5P41912 237 aa1.93□□□□□ -2.1
BRE1YDL074C DIE2P50076 525 aa1.93□□□□□ -2.1
BRE1YDL074C RHO5P53879 331 aaKnown RBP1.93□□□□□ -2.1
BRE1YDL074C NCE101Q02820 53 aa1.93□□□□□ -2.1
BRE1YDL074C CTL1Q03220 320 aaKnown RBP1.93□□□□□ -2.1
BRE1YDL074C PRM15Q03262 622 aa1.93□□□□□ -2.1
BRE1YDL074C SSY1Q03770 852 aa1.93□□□□□ -2.1
BRE1YDL074C YDR249CQ03787 373 aa1.93□□□□□ -2.1
BRE1YDL074C RVB1Q03940 463 aaKnown RBP1.93□□□□□ -2.1
BRE1YDL074C MRPL1Q04599 285 aa1.93□□□□□ -2.1
BRE1YDL074C PHO92Q06390 306 aa1.93□□□□□ -2.1
BRE1YDL074C YPR174CQ06616 221 aaPredicted RBP1.93□□□□□ -2.1
BRE1YDL074C YOR378WQ08902 515 aa1.93□□□□□ -2.1
BRE1YDL074C FEX2Q08991 375 aa1.93□□□□□ -2.1
BRE1YDL074C RTK1Q12100 620 aaPredicted RBP1.93□□□□□ -2.1
BRE1YDL074C MCP1Q12106 302 aa1.93□□□□□ -2.1
BRE1YDL074C MDM32Q12171 622 aa1.93□□□□□ -2.1
BRE1YDL074C RRI1Q12468 440 aa1.93□□□□□ -2.1
BRE1YDL074C TOM1Q03280 3268 aa1.92□□□□□ -2.1
BRE1YDL074C BEM2P39960 2167 aaKnown RBP1.92□□□□□ -2.1
BRE1YDL074C YSF3P0C074 85 aaPredicted RBP1.92□□□□□ -2.1
BRE1YDL074C NHP6BP11633 99 aaKnown RBP1.92□□□□□ -2.1
BRE1YDL074C SAC7P17121 654 aa1.92□□□□□ -2.1
BRE1YDL074C GLK1P17709 500 aaKnown RBP1.92□□□□□ -2.1
BRE1YDL074C SPO7P18410 259 aa1.92□□□□□ -2.1
BRE1YDL074C MAG1P22134 296 aaKnown RBP1.92□□□□□ -2.1
BRE1YDL074C AIM17P23180 465 aaKnown RBP1.92□□□□□ -2.1
BRE1YDL074C STP22P25604 385 aa1.92□□□□□ -2.1
BRE1YDL074C NAM9P27929 486 aa1.92□□□□□ -2.1
BRE1YDL074C CWP1P28319 239 aa1.92□□□□□ -2.1
BRE1YDL074C PMT2P31382 759 aa1.92□□□□□ -2.1
BRE1YDL074C MKK2P32491 506 aa1.92□□□□□ -2.1
BRE1YDL074C YKL077WP36081 392 aa1.92□□□□□ -2.1
BRE1YDL074C AUR1P36107 401 aaPredicted RBP1.92□□□□□ -2.1
BRE1YDL074C APD1P38281 316 aa1.92□□□□□ -2.1
BRE1YDL074C YBR238CP38330 731 aaKnown RBP1.92□□□□□ -2.1
BRE1YDL074C NSG1P38837 291 aa1.92□□□□□ -2.1
BRE1YDL074C MBP1P39678 833 aa1.92□□□□□ -2.1
BRE1YDL074C YER137CP40083 148 aaKnown RBP1.92□□□□□ -2.1
BRE1YDL074C RPL13BP40212 199 aaKnown RBP1.92□□□□□ -2.1
BRE1YDL074C YMR144WP40214 342 aaKnown RBP1.92□□□□□ -2.1
BRE1YDL074C TED1P40533 473 aa1.92□□□□□ -2.1
BRE1YDL074C IDP2P41939 412 aa1.92□□□□□ -2.1
BRE1YDL074C VPS73P53142 486 aaKnown RBP1.92□□□□□ -2.1
BRE1YDL074C SAY1P53324 424 aa1.92□□□□□ -2.1
BRE1YDL074C YNR062CP53748 327 aa1.92□□□□□ -2.1
BRE1YDL074C CTF19Q02732 369 aa1.92□□□□□ -2.1
BRE1YDL074C YDR541CQ03049 344 aa1.92□□□□□ -2.1
BRE1YDL074C DIG2Q03373 323 aaKnown RBP1.92□□□□□ -2.1
BRE1YDL074C YMR210WQ03649 449 aa1.92□□□□□ -2.1
BRE1YDL074C YML053CQ04978 212 aa1.92□□□□□ -2.1
BRE1YDL074C IRC19Q07843 230 aa1.92□□□□□ -2.1
BRE1YDL074C AVO1Q08236 1176 aa1.92□□□□□ -2.1
BRE1YDL074C FRE3Q08905 711 aa1.92□□□□□ -2.1
BRE1YDL074C FRE5Q08908 694 aa1.92□□□□□ -2.1
BRE1YDL074C ATG31Q12421 196 aa1.92□□□□□ -2.1
BRE1YDL074C RDI1Q12434 202 aa1.92□□□□□ -2.1
BRE1YDL074C RPL13AQ12690 199 aaPredicted RBP1.92□□□□□ -2.1
BRE1YDL074C YMR084WA2P2R3 262 aa1.91□□□□□ -2.1
BRE1YDL074C SCEIP03882 235 aa1.91□□□□□ -2.1
BRE1YDL074C RAD52P06778 471 aaKnown RBP1.91□□□□□ -2.1
BRE1YDL074C ARG80P07249 177 aa1.91□□□□□ -2.1
BRE1YDL074C SPS4P09937 338 aa1.91□□□□□ -2.1
BRE1YDL074C DSF1P0CX08 502 aa1.91□□□□□ -2.1
BRE1YDL074C YNR073CP0CX09 502 aa1.91□□□□□ -2.1
BRE1YDL074C RPS18AP0CX55 146 aaKnown RBP1.91□□□□□ -2.1
BRE1YDL074C RPS18BP0CX56 146 aaPredicted RBP1.91□□□□□ -2.1
BRE1YDL074C MATALPHA1P0CY06 175 aa1.91□□□□□ -2.1
BRE1YDL074C HMLALPHA1P0CY07 175 aa1.91□□□□□ -2.1
BRE1YDL074C ERD1P16151 362 aa1.91□□□□□ -2.1
BRE1YDL074C DBP2P24783 546 aaKnown RBP1.91□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 19.8 ms