RNA–Protein interactions for RNA: ENST00000640648.1

NECAP1-227, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-227ENST00000640648 ACTN1P12814 892 aa8.79□□□□□ -1
NECAP1-227ENST00000640648 TRAPPC10P48553 1259 aa8.79□□□□□ -1
NECAP1-227ENST00000640648 TCP10Q12799 353 aa8.79□□□□□ -1
NECAP1-227ENST00000640648 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.79□□□□□ -1
NECAP1-227ENST00000640648 SETD3Q86TU7 594 aaPredicted RBP8.79□□□□□ -1
NECAP1-227ENST00000640648 GPBP1Q86WP2 473 aa8.79□□□□□ -1
NECAP1-227ENST00000640648 EBF2Q9HAK2 575 aa8.79□□□□□ -1
NECAP1-227ENST00000640648 FBXO9Q9UK97 447 aaPredicted RBP8.79□□□□□ -1
NECAP1-227ENST00000640648 TRPC5Q9UL62 973 aaPredicted RBP8.79□□□□□ -1
NECAP1-227ENST00000640648 ZBTB1Q9Y2K1 713 aa8.79□□□□□ -1
NECAP1-227ENST00000640648 SYNGAP1Q96PV0 1343 aa8.79□□□□□ -1
NECAP1-227ENST00000640648 ANKRD33BA6NCL7 494 aa8.79□□□□□ -1
NECAP1-227ENST00000640648 CES2O00748 559 aa8.79□□□□□ -1
NECAP1-227ENST00000640648 EIF3DO15371 548 aaKnown RBP eCLIP8.79□□□□□ -1
NECAP1-227ENST00000640648 TRAPPC3O43617 180 aa8.79□□□□□ -1
NECAP1-227ENST00000640648 ARFIP2P53365 341 aa8.79□□□□□ -1
NECAP1-227ENST00000640648 MRPS9P82933 396 aaKnown RBP8.79□□□□□ -1
NECAP1-227ENST00000640648 KIF22Q14807 665 aa8.79□□□□□ -1
NECAP1-227ENST00000640648 LRRC41Q15345 812 aa8.79□□□□□ -1
NECAP1-227ENST00000640648 SGO2Q562F6 1265 aa8.79□□□□□ -1
NECAP1-227ENST00000640648 TTC27Q6P3X3 843 aa8.79□□□□□ -1
NECAP1-227ENST00000640648 RSBN1LQ6PCB5 846 aaPredicted RBP8.79□□□□□ -1
NECAP1-227ENST00000640648 RNF169Q8NCN4 708 aa8.79□□□□□ -1
NECAP1-227ENST00000640648 COX4I2Q96KJ9 171 aa8.79□□□□□ -1
NECAP1-227ENST00000640648 CEP19Q96LK0 163 aa8.79□□□□□ -1
NECAP1-227ENST00000640648 ZIM3Q96PE6 472 aa8.79□□□□□ -1
NECAP1-227ENST00000640648 NHEJ1Q9H9Q4 299 aaPredicted RBP8.79□□□□□ -1
NECAP1-227ENST00000640648 ARPP21Q9UBL0 812 aaPredicted RBP8.79□□□□□ -1
NECAP1-227ENST00000640648 TAF6LQ9Y6J9 622 aa8.79□□□□□ -1
NECAP1-227ENST00000640648 ZFYVE16Q7Z3T8 1539 aa8.79□□□□□ -1
NECAP1-227ENST00000640648 F8VZ95 297 aa8.79□□□□□ -1
NECAP1-227ENST00000640648 CAPN1P07384 714 aa8.79□□□□□ -1
NECAP1-227ENST00000640648 CHRNA3P32297 505 aa8.79□□□□□ -1
NECAP1-227ENST00000640648 COPB2P35606 906 aa8.79□□□□□ -1
NECAP1-227ENST00000640648 C21orf59P57076 290 aa8.79□□□□□ -1
NECAP1-227ENST00000640648 DR1Q01658 176 aa8.79□□□□□ -1
NECAP1-227ENST00000640648 MPP3Q13368 585 aa8.79□□□□□ -1
NECAP1-227ENST00000640648 NCCRP1Q6ZVX7 275 aaPredicted RBP8.79□□□□□ -1
NECAP1-227ENST00000640648 TRAPPC11Q7Z392 1133 aa8.79□□□□□ -1
NECAP1-227ENST00000640648 NEK8Q86SG6 692 aa8.79□□□□□ -1
NECAP1-227ENST00000640648 C11orf74Q86VG3 221 aa8.79□□□□□ -1
NECAP1-227ENST00000640648 LRRC47Q8N1G4 583 aaKnown RBP8.79□□□□□ -1
NECAP1-227ENST00000640648 FAM133AQ8N9E0 248 aa8.79□□□□□ -1
NECAP1-227ENST00000640648 NSL1Q96IY1 281 aa8.79□□□□□ -1
NECAP1-227ENST00000640648 MRPS26Q9BYN8 205 aaKnown RBP8.79□□□□□ -1
NECAP1-227ENST00000640648 ASCC2Q9H1I8 757 aaPredicted RBP8.79□□□□□ -1
NECAP1-227ENST00000640648 MBD2Q9UBB5 411 aa8.79□□□□□ -1
NECAP1-227ENST00000640648 TRIM33Q9UPN9 1127 aa8.79□□□□□ -1
NECAP1-227ENST00000640648 DMTF1Q9Y222 760 aa8.79□□□□□ -1
NECAP1-227ENST00000640648 MADDQ8WXG6 1647 aa8.78□□□□□ -1
NECAP1-227ENST00000640648 MAP3K15Q6ZN16 1313 aa8.78□□□□□ -1
NECAP1-227ENST00000640648 ECEL1O95672 775 aa8.78□□□□□ -1
NECAP1-227ENST00000640648 ALOX15P16050 662 aaPredicted RBP8.78□□□□□ -1
NECAP1-227ENST00000640648 RECQLP46063 649 aaPredicted RBP8.78□□□□□ -1
NECAP1-227ENST00000640648 MXI1P50539 228 aa8.78□□□□□ -1
NECAP1-227ENST00000640648 LIN9Q5TKA1 542 aa8.78□□□□□ -1
NECAP1-227ENST00000640648 STX19Q8N4C7 294 aa8.78□□□□□ -1
NECAP1-227ENST00000640648 NT5C3AQ9H0P0 336 aa8.78□□□□□ -1
NECAP1-227ENST00000640648 ANKZF1Q9H8Y5 726 aa8.78□□□□□ -1
NECAP1-227ENST00000640648 ANKFY1Q9P2R3 1169 aa8.78□□□□□ -1
NECAP1-227ENST00000640648 SEL1LQ9UBV2 794 aa8.78□□□□□ -1
NECAP1-227ENST00000640648 POLR1AO95602 1720 aaPredicted RBP8.78□□□□□ -1
NECAP1-227ENST00000640648 TET3O43151 1660 aa8.78□□□□□ -1
NECAP1-227ENST00000640648 CCDC189A1A4V9 331 aa8.78□□□□□ -1
NECAP1-227ENST00000640648 H3BNX3 289 aa8.78□□□□□ -1
NECAP1-227ENST00000640648 FOXN1O15353 648 aa8.78□□□□□ -1
NECAP1-227ENST00000640648 SASH3O75995 380 aa8.78□□□□□ -1
NECAP1-227ENST00000640648 KLHL2O95198 593 aa8.78□□□□□ -1
NECAP1-227ENST00000640648 SERPINB2P05120 415 aa8.78□□□□□ -1
NECAP1-227ENST00000640648 NT5C2P49902 561 aa8.78□□□□□ -1
NECAP1-227ENST00000640648 STOX1Q6ZVD7 989 aa8.78□□□□□ -1
NECAP1-227ENST00000640648 CRLF3Q8IUI8 442 aa8.78□□□□□ -1
NECAP1-227ENST00000640648 S100ZQ8WXG8 99 aa8.78□□□□□ -1
NECAP1-227ENST00000640648 SEPT1Q8WYJ6 367 aa8.78□□□□□ -1
NECAP1-227ENST00000640648 SRPRBQ9Y5M8 271 aaKnown RBP8.78□□□□□ -1
NECAP1-227ENST00000640648 SQORQ9Y6N5 450 aa8.78□□□□□ -1
NECAP1-227ENST00000640648 SHROOM2Q13796 1616 aa8.78□□□□□ -1
NECAP1-227ENST00000640648 ARHGEF35A5YM69 484 aa8.78□□□□□ -1
NECAP1-227ENST00000640648 GFPT2O94808 682 aa8.78□□□□□ -1
NECAP1-227ENST00000640648 XRCC5P13010 732 aaKnown RBP8.78□□□□□ -1
NECAP1-227ENST00000640648 CDH3P22223 829 aa8.78□□□□□ -1
NECAP1-227ENST00000640648 ADSLP30566 484 aaPredicted RBP8.78□□□□□ -1
NECAP1-227ENST00000640648 MCAMP43121 646 aa8.78□□□□□ -1
NECAP1-227ENST00000640648 NR1H2P55055 460 aa8.78□□□□□ -1
NECAP1-227ENST00000640648 SLC7A5Q01650 507 aa8.78□□□□□ -1
NECAP1-227ENST00000640648 MRPL28Q13084 256 aaKnown RBP8.78□□□□□ -1
NECAP1-227ENST00000640648 KRT31Q15323 416 aa8.78□□□□□ -1
NECAP1-227ENST00000640648 FAAH2Q6GMR7 532 aa8.78□□□□□ -1
NECAP1-227ENST00000640648 TBC1D10CQ8IV04 446 aa8.78□□□□□ -1
NECAP1-227ENST00000640648 ZNF398Q8TD17 642 aa8.78□□□□□ -1
NECAP1-227ENST00000640648 DIS3LQ8TF46 1054 aaKnown RBP8.78□□□□□ -1
NECAP1-227ENST00000640648 PAGE5Q96GU1 130 aa8.78□□□□□ -1
NECAP1-227ENST00000640648 ARMCX3Q9UH62 379 aaPredicted RBP8.78□□□□□ -1
NECAP1-227ENST00000640648 CNOT7Q9UIV1 285 aaKnown RBP8.78□□□□□ -1
NECAP1-227ENST00000640648 PCDHA12Q9UN75 941 aa8.78□□□□□ -1
NECAP1-227ENST00000640648 GDAQ9Y2T3 454 aa8.78□□□□□ -1
NECAP1-227ENST00000640648 EFCAB6Q5THR3 1501 aa8.78□□□□□ -1
NECAP1-227ENST00000640648 A0A1B0GTH6 734 aa8.78□□□□□ -1
NECAP1-227ENST00000640648 DCAF8L1A6NGE4 600 aa8.78□□□□□ -1
NECAP1-227ENST00000640648 VWA5AO00534 786 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms