RNA–Protein interactions for RNA: ENST00000640481.1

NECAP1-226, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,216 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-226ENST00000640481 EHD2Q9NZN4 543 aa7.35□□□□□ -1.23
NECAP1-226ENST00000640481 PRDM4Q9UKN5 801 aa7.35□□□□□ -1.23
NECAP1-226ENST00000640481 PACSIN2Q9UNF0 486 aaPredicted RBP7.35□□□□□ -1.23
NECAP1-226ENST00000640481 USP20Q9Y2K6 914 aa7.35□□□□□ -1.23
NECAP1-226ENST00000640481 TMCO5BA8MYB1 307 aa7.35□□□□□ -1.23
NECAP1-226ENST00000640481 ATG7O95352 703 aa7.35□□□□□ -1.23
NECAP1-226ENST00000640481 UBA1P22314 1058 aaKnown RBP7.35□□□□□ -1.23
NECAP1-226ENST00000640481 LONRF2Q1L5Z9 754 aa7.35□□□□□ -1.23
NECAP1-226ENST00000640481 ARHGEF19Q8IW93 802 aa7.35□□□□□ -1.23
NECAP1-226ENST00000640481 POMGNT1Q8WZA1 660 aa7.35□□□□□ -1.23
NECAP1-226ENST00000640481 TMEM143Q96AN5 459 aa7.35□□□□□ -1.23
NECAP1-226ENST00000640481 IFT74Q96LB3 600 aa7.35□□□□□ -1.23
NECAP1-226ENST00000640481 TMEM117Q9H0C3 514 aa7.35□□□□□ -1.23
NECAP1-226ENST00000640481 POLR3FQ9H1D9 316 aaPredicted RBP7.35□□□□□ -1.23
NECAP1-226ENST00000640481 TXNRD2Q9NNW7 524 aa7.35□□□□□ -1.23
NECAP1-226ENST00000640481 ABCB6Q9NP58 842 aa7.35□□□□□ -1.23
NECAP1-226ENST00000640481 MAFBQ9Y5Q3 323 aaPredicted RBP7.35□□□□□ -1.23
NECAP1-226ENST00000640481 PTPRFP10586 1907 aa7.35□□□□□ -1.23
NECAP1-226ENST00000640481 MYH9P35579 1960 aaKnown RBP7.34□□□□□ -1.23
NECAP1-226ENST00000640481 IGSF9BQ9UPX0 1349 aa7.34□□□□□ -1.23
NECAP1-226ENST00000640481 GSTTP1A0A1W2PQM5 241 aa7.34□□□□□ -1.23
NECAP1-226ENST00000640481 GRID2IPA4D2P6 1211 aa7.34□□□□□ -1.23
NECAP1-226ENST00000640481 SPDYE5A6NIY4 337 aa7.34□□□□□ -1.23
NECAP1-226ENST00000640481 HNRNPDLO14979 420 aaKnown RBP7.34□□□□□ -1.23
NECAP1-226ENST00000640481 MAPK13O15264 365 aa7.34□□□□□ -1.23
NECAP1-226ENST00000640481 CNMDO75829 334 aa7.34□□□□□ -1.23
NECAP1-226ENST00000640481 PGK2P07205 417 aa7.34□□□□□ -1.23
NECAP1-226ENST00000640481 H2AFZP0C0S5 128 aa7.34□□□□□ -1.23
NECAP1-226ENST00000640481 MATR3P43243 847 aaKnown RBP eCLIP7.34□□□□□ -1.236e-7■■■■□ 26.2
NECAP1-226ENST00000640481 MXI1P50539 228 aa7.34□□□□□ -1.23
NECAP1-226ENST00000640481 POLGP54098 1239 aaPredicted RBP7.34□□□□□ -1.23
NECAP1-226ENST00000640481 MAP2K1Q02750 393 aaPredicted RBP7.34□□□□□ -1.23
NECAP1-226ENST00000640481 C2orf54Q08AI8 447 aa7.34□□□□□ -1.23
NECAP1-226ENST00000640481 EPC2Q52LR7 807 aa7.34□□□□□ -1.23
NECAP1-226ENST00000640481 H2AFVQ71UI9 128 aa7.34□□□□□ -1.23
NECAP1-226ENST00000640481 LNX1Q8TBB1 728 aaPredicted RBP7.34□□□□□ -1.23
NECAP1-226ENST00000640481 PARD3BQ8TEW8 1205 aa7.34□□□□□ -1.23
NECAP1-226ENST00000640481 MS4A14Q96JA4 679 aa7.34□□□□□ -1.23
NECAP1-226ENST00000640481 HINFPQ9BQA5 517 aa7.34□□□□□ -1.23
NECAP1-226ENST00000640481 GOLPH3Q9H4A6 298 aa7.34□□□□□ -1.23
NECAP1-226ENST00000640481 SUGCTQ9HAC7 445 aa7.34□□□□□ -1.23
NECAP1-226ENST00000640481 PCDHGC5Q9Y5F6 944 aa7.34□□□□□ -1.23
NECAP1-226ENST00000640481 WDR90Q96KV7 1748 aa7.34□□□□□ -1.23
NECAP1-226ENST00000640481 LCTP09848 1927 aa7.34□□□□□ -1.23
NECAP1-226ENST00000640481 P4HA2O15460 535 aa7.34□□□□□ -1.23
NECAP1-226ENST00000640481 N4BP1O75113 896 aaKnown RBP7.34□□□□□ -1.23
NECAP1-226ENST00000640481 ZMYND10O75800 440 aa7.34□□□□□ -1.23
NECAP1-226ENST00000640481 OATP04181 439 aa7.34□□□□□ -1.23
NECAP1-226ENST00000640481 EDNRBP24530 442 aa7.34□□□□□ -1.23
NECAP1-226ENST00000640481 ANXA13P27216 316 aa7.34□□□□□ -1.23
NECAP1-226ENST00000640481 EPHX2P34913 555 aa7.34□□□□□ -1.23
NECAP1-226ENST00000640481 PLA2G4AP47712 749 aa7.34□□□□□ -1.23
NECAP1-226ENST00000640481 RTP1P59025 263 aa7.34□□□□□ -1.23
NECAP1-226ENST00000640481 EMC2Q15006 297 aa7.34□□□□□ -1.23
NECAP1-226ENST00000640481 LY6KQ17RY6 165 aa7.34□□□□□ -1.23
NECAP1-226ENST00000640481 BEND6Q5SZJ8 279 aaPredicted RBP7.34□□□□□ -1.23
NECAP1-226ENST00000640481 CCDC181Q5TID7 509 aa7.34□□□□□ -1.23
NECAP1-226ENST00000640481 TAS1R3Q7RTX0 852 aa7.34□□□□□ -1.23
NECAP1-226ENST00000640481 SPATA4Q8NEY3 305 aa7.34□□□□□ -1.23
NECAP1-226ENST00000640481 SLC30A5Q8TAD4 765 aa7.34□□□□□ -1.23
NECAP1-226ENST00000640481 OLIG1Q8TAK6 271 aa7.34□□□□□ -1.23
NECAP1-226ENST00000640481 IPO4Q8TEX9 1081 aaKnown RBP7.34□□□□□ -1.23
NECAP1-226ENST00000640481 HNRNPLLQ8WVV9 542 aaKnown RBP7.34□□□□□ -1.23
NECAP1-226ENST00000640481 KAT5Q92993 513 aa7.34□□□□□ -1.23
NECAP1-226ENST00000640481 OPTNQ96CV9 577 aa7.34□□□□□ -1.23
NECAP1-226ENST00000640481 HVCN1Q96D96 273 aa7.34□□□□□ -1.23
NECAP1-226ENST00000640481 BICD1Q96G01 975 aa7.34□□□□□ -1.23
NECAP1-226ENST00000640481 FUT8Q9BYC5 575 aa7.34□□□□□ -1.23
NECAP1-226ENST00000640481 RBPJLQ9UBG7 517 aa7.34□□□□□ -1.23
NECAP1-226ENST00000640481 NENFQ9UMX5 172 aa7.34□□□□□ -1.23
NECAP1-226ENST00000640481 BTNL10A8MVZ5 291 aa7.33□□□□□ -1.24
NECAP1-226ENST00000640481 ATP8B1O43520 1251 aa7.33□□□□□ -1.24
NECAP1-226ENST00000640481 FARP2O94887 1054 aaPredicted RBP7.33□□□□□ -1.24
NECAP1-226ENST00000640481 GGPS1O95749 300 aa7.33□□□□□ -1.24
NECAP1-226ENST00000640481 CCDC172P0C7W6 258 aa7.33□□□□□ -1.24
NECAP1-226ENST00000640481 TNFAIP3P21580 790 aa7.33□□□□□ -1.24
NECAP1-226ENST00000640481 USP8P40818 1118 aa7.33□□□□□ -1.24
NECAP1-226ENST00000640481 PAFAH1B1P43034 410 aa7.33□□□□□ -1.24
NECAP1-226ENST00000640481 GALCP54803 685 aa7.33□□□□□ -1.24
NECAP1-226ENST00000640481 PTPROQ16827 1216 aa7.33□□□□□ -1.24
NECAP1-226ENST00000640481 EAPPQ56P03 285 aaPredicted RBP7.33□□□□□ -1.24
NECAP1-226ENST00000640481 BRDTQ58F21 947 aaPredicted RBP7.33□□□□□ -1.24
NECAP1-226ENST00000640481 MEI1Q5TIA1 1274 aa7.33□□□□□ -1.24
NECAP1-226ENST00000640481 WDR78Q5VTH9 848 aa7.33□□□□□ -1.24
NECAP1-226ENST00000640481 USP50Q70EL3 339 aaPredicted RBP7.33□□□□□ -1.24
NECAP1-226ENST00000640481 PCYT2Q99447 389 aa7.33□□□□□ -1.24
NECAP1-226ENST00000640481 TOPORSQ9NS56 1045 aaPredicted RBP7.33□□□□□ -1.24
NECAP1-226ENST00000640481 SEPT11Q9NVA2 429 aaKnown RBP7.33□□□□□ -1.24
NECAP1-226ENST00000640481 ARHGAP28Q9P2N2 729 aa7.33□□□□□ -1.24
NECAP1-226ENST00000640481 AGTPBP1Q9UPW5 1226 aa7.33□□□□□ -1.24
NECAP1-226ENST00000640481 KCNH4Q9UQ05 1017 aa7.33□□□□□ -1.24
NECAP1-226ENST00000640481 LRRIQ3A6PVS8 624 aaPredicted RBP7.33□□□□□ -1.24
NECAP1-226ENST00000640481 ERLIN1O75477 346 aa7.33□□□□□ -1.24
NECAP1-226ENST00000640481 DLATP10515 647 aaKnown RBP7.33□□□□□ -1.24
NECAP1-226ENST00000640481 MRPS25P82663 173 aaKnown RBP7.33□□□□□ -1.24
NECAP1-226ENST00000640481 NEDD9Q14511 834 aa7.33□□□□□ -1.24
NECAP1-226ENST00000640481 KRT39Q6A163 491 aa7.33□□□□□ -1.24
NECAP1-226ENST00000640481 WDR93Q6P2C0 686 aa7.33□□□□□ -1.24
NECAP1-226ENST00000640481 PALB2Q86YC2 1186 aa7.33□□□□□ -1.24
NECAP1-226ENST00000640481 PPM1KQ8N3J5 372 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms