RNA–Protein interactions for RNA: ENST00000640440.1

HNRNPU-229, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 3

Gene HNRNPU, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-229ENST00000640440 HIDE1A8MVS5 230 aa16■□□□□ 0.15
HNRNPU-229ENST00000640440 TSPAN1O60635 241 aa16■□□□□ 0.15
HNRNPU-229ENST00000640440 CD2BP2O95400 341 aaKnown RBP16■□□□□ 0.15
HNRNPU-229ENST00000640440 XRCC6P12956 609 aaKnown RBP eCLIP16■□□□□ 0.153e-19■□□□□ 9.8
HNRNPU-229ENST00000640440 RNASELQ05823 741 aaKnown RBP16■□□□□ 0.15
HNRNPU-229ENST00000640440 MBTD1Q05BQ5 628 aa16■□□□□ 0.15
HNRNPU-229ENST00000640440 AGMOQ6ZNB7 445 aa16■□□□□ 0.15
HNRNPU-229ENST00000640440 MAEAQ7L5Y9 396 aa16■□□□□ 0.15
HNRNPU-229ENST00000640440 TMEM173Q86WV6 379 aaPredicted RBP16■□□□□ 0.15
HNRNPU-229ENST00000640440 VN1R2Q8NFZ6 395 aa16■□□□□ 0.15
HNRNPU-229ENST00000640440 URGCPQ8TCY9 931 aa16■□□□□ 0.15
HNRNPU-229ENST00000640440 TMEM169Q96HH4 297 aa16■□□□□ 0.15
HNRNPU-229ENST00000640440 CPB2Q96IY4 423 aa16■□□□□ 0.15
HNRNPU-229ENST00000640440 MSLNLQ96KJ4 702 aa16■□□□□ 0.15
HNRNPU-229ENST00000640440 CDCA3Q99618 268 aaPredicted RBP16■□□□□ 0.15
HNRNPU-229ENST00000640440 C1QTNF1Q9BXJ1 281 aa16■□□□□ 0.15
HNRNPU-229ENST00000640440 NRDE2Q9H7Z3 1164 aa16■□□□□ 0.15
HNRNPU-229ENST00000640440 RSAD1Q9HA92 442 aa16■□□□□ 0.15
HNRNPU-229ENST00000640440 NGRNQ9NPE2 291 aaKnown RBP16■□□□□ 0.15
HNRNPU-229ENST00000640440 GPRC5CQ9NQ84 441 aa16■□□□□ 0.15
HNRNPU-229ENST00000640440 PRKAG3Q9UGI9 489 aa16■□□□□ 0.15
HNRNPU-229ENST00000640440 TRIOO75962 3097 aa16■□□□□ 0.15
HNRNPU-229ENST00000640440 U2AF2P26368 475 aaKnown RBP eCLIP15.99■□□□□ 0.152e-10■■□□□ 12.9
HNRNPU-229ENST00000640440 TOB1P50616 345 aaPredicted RBP15.99■□□□□ 0.15
HNRNPU-229ENST00000640440 POU5F1BQ06416 359 aa15.99■□□□□ 0.15
HNRNPU-229ENST00000640440 COASYQ13057 564 aa15.99■□□□□ 0.15
HNRNPU-229ENST00000640440 PCBP1Q15365 356 aaKnown RBP eCLIP15.99■□□□□ 0.15
HNRNPU-229ENST00000640440 HAUS3Q68CZ6 603 aa15.99■□□□□ 0.15
HNRNPU-229ENST00000640440 NOTUMQ6P988 496 aa15.99■□□□□ 0.15
HNRNPU-229ENST00000640440 TMC7Q7Z402 723 aa15.99■□□□□ 0.15
HNRNPU-229ENST00000640440 MRPL10Q7Z7H8 261 aaKnown RBP15.99■□□□□ 0.15
HNRNPU-229ENST00000640440 IFNLR1Q8IU57 520 aaPredicted RBP15.99■□□□□ 0.15
HNRNPU-229ENST00000640440 ADHFE1Q8IWW8 467 aa15.99■□□□□ 0.15
HNRNPU-229ENST00000640440 SMRP1Q8NCR6 262 aa15.99■□□□□ 0.15
HNRNPU-229ENST00000640440 TMX3Q96JJ7 454 aa15.99■□□□□ 0.15
HNRNPU-229ENST00000640440 NACC1Q96RE7 527 aa15.99■□□□□ 0.15
HNRNPU-229ENST00000640440 EIF2AQ9BY44 585 aaKnown RBP15.99■□□□□ 0.15
HNRNPU-229ENST00000640440 DBR1Q9UK59 544 aaKnown RBP15.99■□□□□ 0.15
HNRNPU-229ENST00000640440 CNTNAP2Q9UHC6 1331 aa15.98■□□□□ 0.15
HNRNPU-229ENST00000640440 FSD2A1L4K1 749 aa15.98■□□□□ 0.15
HNRNPU-229ENST00000640440 LRRIQ4A6NIV6 560 aa15.98■□□□□ 0.15
HNRNPU-229ENST00000640440 B4GALT3O60512 393 aa15.98■□□□□ 0.15
HNRNPU-229ENST00000640440 EYA4O95677 639 aa15.98■□□□□ 0.15
HNRNPU-229ENST00000640440 NCLP19338 710 aaKnown RBP15.98■□□□□ 0.15
HNRNPU-229ENST00000640440 RPA1P27694 616 aa15.98■□□□□ 0.15
HNRNPU-229ENST00000640440 AXLP30530 894 aa15.98■□□□□ 0.15
HNRNPU-229ENST00000640440 CA8P35219 290 aa15.98■□□□□ 0.15
HNRNPU-229ENST00000640440 AFF1P51825 1210 aaKnown RBP15.98■□□□□ 0.15
HNRNPU-229ENST00000640440 SMC1AQ14683 1233 aaKnown RBP15.98■□□□□ 0.15
HNRNPU-229ENST00000640440 AMHR2Q16671 573 aa15.98■□□□□ 0.15
HNRNPU-229ENST00000640440 MCTP1Q6DN14 999 aa15.98■□□□□ 0.15
HNRNPU-229ENST00000640440 LLGL2Q6P1M3 1020 aa15.98■□□□□ 0.15
HNRNPU-229ENST00000640440 C4orf32Q8N8J7 132 aa15.98■□□□□ 0.15
HNRNPU-229ENST00000640440 SMG8Q8ND04 991 aaKnown RBP15.98■□□□□ 0.15
HNRNPU-229ENST00000640440 MCPH1Q8NEM0 835 aa15.98■□□□□ 0.15
HNRNPU-229ENST00000640440 CCDC51Q96ER9 411 aa15.98■□□□□ 0.15
HNRNPU-229ENST00000640440 DNAJB4Q9UDY4 337 aa15.98■□□□□ 0.15
HNRNPU-229ENST00000640440 KIF3AQ9Y496 699 aa15.98■□□□□ 0.15
HNRNPU-229ENST00000640440 IPPQ9Y573 584 aa15.98■□□□□ 0.15
HNRNPU-229ENST00000640440 PCDHB6Q9Y5E3 794 aa15.98■□□□□ 0.15
HNRNPU-229ENST00000640440 TECTAO75443 2155 aa15.97■□□□□ 0.15
HNRNPU-229ENST00000640440 ZDBF2Q9HCK1 2354 aa15.97■□□□□ 0.15
HNRNPU-229ENST00000640440 ARHGEF35A5YM69 484 aa15.97■□□□□ 0.15
HNRNPU-229ENST00000640440 B4GALT5O43286 388 aa15.97■□□□□ 0.15
HNRNPU-229ENST00000640440 GALTP07902 379 aa15.97■□□□□ 0.15
HNRNPU-229ENST00000640440 SRGAP2BP0DMP2 458 aa15.97■□□□□ 0.15
HNRNPU-229ENST00000640440 ITGA4P13612 1032 aa15.97■□□□□ 0.15
HNRNPU-229ENST00000640440 ARF4P18085 180 aaPredicted RBP15.97■□□□□ 0.15
HNRNPU-229ENST00000640440 CCT6AP40227 531 aaKnown RBP15.97■□□□□ 0.15
HNRNPU-229ENST00000640440 SLC11A1P49279 550 aa15.97■□□□□ 0.15
HNRNPU-229ENST00000640440 FXR2P51116 673 aaKnown RBP eCLIP15.97■□□□□ 0.157e-13■□□□□ 10.3
HNRNPU-229ENST00000640440 NCBP1Q09161 790 aaKnown RBP15.97■□□□□ 0.15
HNRNPU-229ENST00000640440 PTGDRQ13258 359 aa15.97■□□□□ 0.15
HNRNPU-229ENST00000640440 PADI6Q6TGC4 694 aa15.97■□□□□ 0.15
HNRNPU-229ENST00000640440 ZNF280BQ86YH2 543 aa15.97■□□□□ 0.15
HNRNPU-229ENST00000640440 VPS52Q8N1B4 723 aa15.97■□□□□ 0.15
HNRNPU-229ENST00000640440 BCL7CQ8WUZ0 217 aaPredicted RBP15.97■□□□□ 0.15
HNRNPU-229ENST00000640440 IGSF21Q96ID5 467 aa15.97■□□□□ 0.15
HNRNPU-229ENST00000640440 NFKBIZQ9BYH8 718 aa15.97■□□□□ 0.15
HNRNPU-229ENST00000640440 CSRNP2Q9H175 543 aa15.97■□□□□ 0.15
HNRNPU-229ENST00000640440 USP15Q9Y4E8 981 aaPredicted RBP15.97■□□□□ 0.15
HNRNPU-229ENST00000640440 HES2Q9Y543 173 aa15.97■□□□□ 0.15
HNRNPU-229ENST00000640440 MUC6Q6W4X9 2439 aa15.96■□□□□ 0.15
HNRNPU-229ENST00000640440 CARNS1A5YM72 827 aa15.96■□□□□ 0.15
HNRNPU-229ENST00000640440 FAM86C2PA6NEL3 165 aa15.96■□□□□ 0.15
HNRNPU-229ENST00000640440 C2orf71A6NGG8 1288 aa15.96■□□□□ 0.15
HNRNPU-229ENST00000640440 C19orf67A6NJJ6 358 aa15.96■□□□□ 0.15
HNRNPU-229ENST00000640440 PI4K2BG5E9Z4 385 aa15.96■□□□□ 0.15
HNRNPU-229ENST00000640440 POMCP01189 267 aa15.96■□□□□ 0.15
HNRNPU-229ENST00000640440 COL9A1P20849 921 aa15.96■□□□□ 0.15
HNRNPU-229ENST00000640440 ECM1Q16610 540 aa15.96■□□□□ 0.15
HNRNPU-229ENST00000640440 MRPL43Q8N983 215 aaKnown RBP15.96■□□□□ 0.15
HNRNPU-229ENST00000640440 CNNM3Q8NE01 707 aa15.96■□□□□ 0.15
HNRNPU-229ENST00000640440 BSNDQ8WZ55 320 aa15.96■□□□□ 0.15
HNRNPU-229ENST00000640440 TBC1D32Q96NH3 1257 aa15.96■□□□□ 0.15
HNRNPU-229ENST00000640440 FAM193BQ96PV7 902 aaPredicted RBP15.96■□□□□ 0.15
HNRNPU-229ENST00000640440 POP1Q99575 1024 aaKnown RBP15.96■□□□□ 0.15
HNRNPU-229ENST00000640440 APOL6Q9BWW8 343 aa15.96■□□□□ 0.15
HNRNPU-229ENST00000640440 TRIM6Q9C030 488 aaPredicted RBP15.96■□□□□ 0.15
HNRNPU-229ENST00000640440 ZBP1Q9H171 429 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms