RNA–Protein interactions for RNA: ENST00000640135.1

SCN1B-208, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 4,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-208ENST00000640135 HOXA2O43364 376 aa11.78□□□□□ -0.52
SCN1B-208ENST00000640135 SUPT20HL2P0C7V6 817 aa11.78□□□□□ -0.52
SCN1B-208ENST00000640135 HOXA10P31260 410 aaPredicted RBP11.78□□□□□ -0.52
SCN1B-208ENST00000640135 SLC26A2P50443 739 aa11.78□□□□□ -0.52
SCN1B-208ENST00000640135 CDK17Q00537 523 aa11.78□□□□□ -0.52
SCN1B-208ENST00000640135 DRP2Q13474 957 aa11.78□□□□□ -0.52
SCN1B-208ENST00000640135 ZNF394Q53GI3 561 aa11.78□□□□□ -0.52
SCN1B-208ENST00000640135 BTBD8Q5XKL5 378 aa11.78□□□□□ -0.52
SCN1B-208ENST00000640135 DCP1BQ8IZD4 617 aaKnown RBP11.78□□□□□ -0.52
SCN1B-208ENST00000640135 INTS2Q9H0H0 1204 aaKnown RBP11.78□□□□□ -0.52
SCN1B-208ENST00000640135 EPB41L4AQ9HCS5 686 aaPredicted RBP11.78□□□□□ -0.52
SCN1B-208ENST00000640135 IP6K2Q9UHH9 426 aa11.78□□□□□ -0.52
SCN1B-208ENST00000640135 ANAPC7Q9UJX3 599 aa11.78□□□□□ -0.52
SCN1B-208ENST00000640135 DCDC2CA8MYV0 355 aa11.78□□□□□ -0.52
SCN1B-208ENST00000640135 POLRMTO00411 1230 aaKnown RBP11.78□□□□□ -0.52
SCN1B-208ENST00000640135 ZNF500O60304 480 aaPredicted RBP11.78□□□□□ -0.52
SCN1B-208ENST00000640135 ZWINTO95229 277 aa11.78□□□□□ -0.52
SCN1B-208ENST00000640135 CYBBP04839 570 aa11.78□□□□□ -0.52
SCN1B-208ENST00000640135 EPHB4P54760 987 aa11.78□□□□□ -0.52
SCN1B-208ENST00000640135 EMC2Q15006 297 aa11.78□□□□□ -0.52
SCN1B-208ENST00000640135 PCGF5Q86SE9 256 aa11.78□□□□□ -0.52
SCN1B-208ENST00000640135 VCX3BQ9H321 246 aa11.78□□□□□ -0.52
SCN1B-208ENST00000640135 PITPNM2Q9BZ72 1349 aa11.78□□□□□ -0.52
SCN1B-208ENST00000640135 A0A1W2PQC6 194 aa11.78□□□□□ -0.52
SCN1B-208ENST00000640135 ITGA4P13612 1032 aa11.78□□□□□ -0.52
SCN1B-208ENST00000640135 PCSK1P29120 753 aa11.78□□□□□ -0.52
SCN1B-208ENST00000640135 IRX4P78413 519 aa11.78□□□□□ -0.52
SCN1B-208ENST00000640135 SKIV2LQ15477 1246 aaKnown RBP11.78□□□□□ -0.52
SCN1B-208ENST00000640135 PTPROQ16827 1216 aa11.78□□□□□ -0.52
SCN1B-208ENST00000640135 USP50Q70EL3 339 aaPredicted RBP11.78□□□□□ -0.52
SCN1B-208ENST00000640135 LSM7Q9UK45 103 aaKnown RBP11.78□□□□□ -0.52
SCN1B-208ENST00000640135 TMX2Q9Y320 296 aa11.78□□□□□ -0.52
SCN1B-208ENST00000640135 CSPG5O95196 566 aa11.77□□□□□ -0.52
SCN1B-208ENST00000640135 RPA1P27694 616 aa11.77□□□□□ -0.52
SCN1B-208ENST00000640135 PAPOLAP51003 745 aaKnown RBP11.77□□□□□ -0.52
SCN1B-208ENST00000640135 DYNLT1P63172 113 aa11.77□□□□□ -0.52
SCN1B-208ENST00000640135 SH2D4BQ5SQS7 431 aa11.77□□□□□ -0.52
SCN1B-208ENST00000640135 CENPUQ71F23 418 aa11.77□□□□□ -0.52
SCN1B-208ENST00000640135 RNF10Q8N5U6 811 aaKnown RBP11.77□□□□□ -0.52
SCN1B-208ENST00000640135 DAGLBQ8NCG7 672 aa11.77□□□□□ -0.52
SCN1B-208ENST00000640135 AFG1LQ8WV93 481 aa11.77□□□□□ -0.52
SCN1B-208ENST00000640135 PPP1R13BQ96KQ4 1090 aa11.77□□□□□ -0.52
SCN1B-208ENST00000640135 C7orf25Q9BPX7 421 aa11.77□□□□□ -0.52
SCN1B-208ENST00000640135 DDX56Q9NY93 547 aaKnown RBP11.77□□□□□ -0.52
SCN1B-208ENST00000640135 PTPN22Q9Y2R2 807 aa11.77□□□□□ -0.52
SCN1B-208ENST00000640135 KRT3P12035 628 aa11.77□□□□□ -0.52
SCN1B-208ENST00000640135 SAT1P21673 171 aa11.77□□□□□ -0.52
SCN1B-208ENST00000640135 FGFR2P21802 821 aa11.77□□□□□ -0.52
SCN1B-208ENST00000640135 IL9RQ01113 521 aa11.77□□□□□ -0.52
SCN1B-208ENST00000640135 PRKCEQ02156 737 aa11.77□□□□□ -0.52
SCN1B-208ENST00000640135 ZNF484Q5JVG2 852 aa11.77□□□□□ -0.52
SCN1B-208ENST00000640135 SPATA2LQ8IUW3 424 aaPredicted RBP11.77□□□□□ -0.52
SCN1B-208ENST00000640135 GMCL1P1Q8NEA9 526 aa11.77□□□□□ -0.52
SCN1B-208ENST00000640135 APPL2Q8NEU8 664 aa11.77□□□□□ -0.52
SCN1B-208ENST00000640135 FAM71BQ8TC56 605 aa11.77□□□□□ -0.52
SCN1B-208ENST00000640135 TRIM9Q9C026 710 aa11.77□□□□□ -0.52
SCN1B-208ENST00000640135 TTI1O43156 1089 aa11.77□□□□□ -0.53
SCN1B-208ENST00000640135 HSPA8P11142 646 aaKnown RBP11.77□□□□□ -0.53
SCN1B-208ENST00000640135 PSMC1P62191 440 aaKnown RBP11.77□□□□□ -0.53
SCN1B-208ENST00000640135 RPS6P62753 249 aaKnown RBP11.77□□□□□ -0.53
SCN1B-208ENST00000640135 CDO1Q16878 200 aa11.77□□□□□ -0.53
SCN1B-208ENST00000640135 SGSM1Q2NKQ1 1148 aa11.77□□□□□ -0.53
SCN1B-208ENST00000640135 PRAMEF18Q5VWM3 479 aa11.77□□□□□ -0.53
SCN1B-208ENST00000640135 ITPRIPL1Q6GPH6 555 aa11.77□□□□□ -0.53
SCN1B-208ENST00000640135 KLC3Q6P597 504 aa11.77□□□□□ -0.53
SCN1B-208ENST00000640135 RGL1Q9NZL6 768 aa11.77□□□□□ -0.53
SCN1B-208ENST00000640135 ITSN1Q15811 1721 aa11.77□□□□□ -0.53
SCN1B-208ENST00000640135 STRNO43815 780 aa11.77□□□□□ -0.53
SCN1B-208ENST00000640135 PNPLA4P41247 253 aa11.77□□□□□ -0.53
SCN1B-208ENST00000640135 INHBEP58166 350 aa11.77□□□□□ -0.53
SCN1B-208ENST00000640135 BFSP2Q13515 415 aa11.77□□□□□ -0.53
SCN1B-208ENST00000640135 TMEM132DQ14C87 1099 aa11.77□□□□□ -0.53
SCN1B-208ENST00000640135 PPP6R3Q5H9R7 873 aaPredicted RBP11.77□□□□□ -0.53
SCN1B-208ENST00000640135 MICALL1Q8N3F8 863 aa11.77□□□□□ -0.53
SCN1B-208ENST00000640135 LRRC8CQ8TDW0 803 aa11.77□□□□□ -0.53
SCN1B-208ENST00000640135 POLR3CQ9BUI4 534 aaPredicted RBP11.77□□□□□ -0.53
SCN1B-208ENST00000640135 PPLO60437 1756 aa11.76□□□□□ -0.53
SCN1B-208ENST00000640135 TFRCP02786 760 aaKnown RBP11.76□□□□□ -0.53
SCN1B-208ENST00000640135 SERPINB6P35237 376 aa11.76□□□□□ -0.53
SCN1B-208ENST00000640135 CYP27A1Q02318 531 aa11.76□□□□□ -0.53
SCN1B-208ENST00000640135 TSTA3Q13630 321 aaPredicted RBP11.76□□□□□ -0.53
SCN1B-208ENST00000640135 EDRF1Q3B7T1 1238 aa11.76□□□□□ -0.53
SCN1B-208ENST00000640135 NOTUMQ6P988 496 aa11.76□□□□□ -0.53
SCN1B-208ENST00000640135 KLHL8Q9P2G9 620 aaPredicted RBP11.76□□□□□ -0.53
SCN1B-208ENST00000640135 BAG5Q9UL15 447 aa11.76□□□□□ -0.53
SCN1B-208ENST00000640135 PPP1R9AQ9ULJ8 1098 aa11.76□□□□□ -0.53
SCN1B-208ENST00000640135 IGSF9BQ9UPX0 1349 aa11.76□□□□□ -0.53
SCN1B-208ENST00000640135 H3BRJ5 948 aa11.76□□□□□ -0.53
SCN1B-208ENST00000640135 EIF3DO15371 548 aaKnown RBP eCLIP11.76□□□□□ -0.53
SCN1B-208ENST00000640135 RBBP5Q15291 538 aaKnown RBP11.76□□□□□ -0.53
SCN1B-208ENST00000640135 SPATS2Q86XZ4 545 aaKnown RBP11.76□□□□□ -0.53
SCN1B-208ENST00000640135 RPUSD2Q8IZ73 545 aaKnown RBP11.76□□□□□ -0.53
SCN1B-208ENST00000640135 SAAL1Q96ER3 474 aa11.76□□□□□ -0.53
SCN1B-208ENST00000640135 NUF2Q9BZD4 464 aa11.76□□□□□ -0.53
SCN1B-208ENST00000640135 PPME1Q9Y570 386 aa11.76□□□□□ -0.53
SCN1B-208ENST00000640135 FXR2P51116 673 aaKnown RBP eCLIP11.76□□□□□ -0.53
SCN1B-208ENST00000640135 STX1BP61266 288 aa11.76□□□□□ -0.53
SCN1B-208ENST00000640135 CAV1Q03135 178 aa11.76□□□□□ -0.53
SCN1B-208ENST00000640135 DRAP1Q14919 205 aaPredicted RBP11.76□□□□□ -0.53
SCN1B-208ENST00000640135 NXNQ6DKJ4 435 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms