RNA–Protein interactions for RNA: ENST00000640091.1

NECAP1-223, Transcript of NECAP endocytosis associated 1, human

TSL 2

Gene NECAP1, Length 2,115 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAP1-223	ENST00000640091	MINDY3	Q9H8M7	445 aa		11.44	□□□□□ -0.58
NECAP1-223	ENST00000640091	METTL14	Q9HCE5	456 aa	Known RBP	11.44	□□□□□ -0.58
NECAP1-223	ENST00000640091	PYCARD	Q9ULZ3	195 aa		11.44	□□□□□ -0.58
NECAP1-223	ENST00000640091		A0A087WZ62	844 aa		11.43	□□□□□ -0.58
NECAP1-223	ENST00000640091	ESPN	B1AK53	854 aa		11.43	□□□□□ -0.58
NECAP1-223	ENST00000640091	IQCF3	P0C7M6	154 aa		11.43	□□□□□ -0.58
NECAP1-223	ENST00000640091	SKIL	P12757	684 aa		11.43	□□□□□ -0.58
NECAP1-223	ENST00000640091	TMOD1	P28289	359 aa		11.43	□□□□□ -0.58
NECAP1-223	ENST00000640091	GJA9	P57773	515 aa		11.43	□□□□□ -0.58
NECAP1-223	ENST00000640091	DLG4	P78352	724 aa		11.43	□□□□□ -0.58
NECAP1-223	ENST00000640091	APBA1	Q02410	837 aa		11.43	□□□□□ -0.58
NECAP1-223	ENST00000640091	KCNMA1	Q12791	1236 aa		11.43	□□□□□ -0.58
NECAP1-223	ENST00000640091	NFRKB	Q6P4R8	1299 aa		11.43	□□□□□ -0.58
NECAP1-223	ENST00000640091	CBWD2	Q8IUF1	395 aa		11.43	□□□□□ -0.58
NECAP1-223	ENST00000640091	KIAA0319L	Q8IZA0	1049 aa		11.43	□□□□□ -0.58
NECAP1-223	ENST00000640091	C17orf53	Q8N3J3	647 aa	Predicted RBP	11.43	□□□□□ -0.58
NECAP1-223	ENST00000640091	LINC01465	Q8N7H1	131 aa		11.43	□□□□□ -0.58
NECAP1-223	ENST00000640091	ERO1A	Q96HE7	468 aa		11.43	□□□□□ -0.58
NECAP1-223	ENST00000640091	FDXACB1	Q9BRP7	624 aa	Predicted RBP	11.43	□□□□□ -0.58
NECAP1-223	ENST00000640091	TMEM134	Q9H6X4	195 aa		11.43	□□□□□ -0.58
NECAP1-223	ENST00000640091	IFT122	Q9HBG6	1241 aa		11.43	□□□□□ -0.58
NECAP1-223	ENST00000640091	XPNPEP3	Q9NQH7	507 aa		11.43	□□□□□ -0.58
NECAP1-223	ENST00000640091	FAM207A	Q9NSI2	230 aa	Predicted RBP	11.43	□□□□□ -0.58
NECAP1-223	ENST00000640091	GINS2	Q9Y248	185 aa		11.43	□□□□□ -0.58
NECAP1-223	ENST00000640091	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	11.43	□□□□□ -0.58
NECAP1-223	ENST00000640091	COL1A2	P08123	1366 aa		11.43	□□□□□ -0.58
NECAP1-223	ENST00000640091	ITIH6	Q6UXX5	1313 aa		11.43	□□□□□ -0.58
NECAP1-223	ENST00000640091	NRCAM	Q92823	1304 aa		11.43	□□□□□ -0.58
NECAP1-223	ENST00000640091	TTC26	A0AVF1	554 aa		11.42	□□□□□ -0.58
NECAP1-223	ENST00000640091	AKR1B15	C9JRZ8	316 aa	Predicted RBP	11.42	□□□□□ -0.58
NECAP1-223	ENST00000640091	INO80B-WBP1	J3KQ70	363 aa		11.42	□□□□□ -0.58
NECAP1-223	ENST00000640091	EPHB6	O15197	1021 aa		11.42	□□□□□ -0.58
NECAP1-223	ENST00000640091	MSC	O60682	206 aa		11.42	□□□□□ -0.58
NECAP1-223	ENST00000640091	TRIM49	P0CI25	452 aa		11.42	□□□□□ -0.58
NECAP1-223	ENST00000640091	TRIM49C	P0CI26	452 aa		11.42	□□□□□ -0.58
NECAP1-223	ENST00000640091	TRIM21	P19474	475 aa	Known RBP	11.42	□□□□□ -0.58
NECAP1-223	ENST00000640091	C12orf56	Q8IXR9	622 aa		11.42	□□□□□ -0.58
NECAP1-223	ENST00000640091	ERGIC2	Q96RQ1	377 aa		11.42	□□□□□ -0.58
NECAP1-223	ENST00000640091	MKNK1	Q9BUB5	465 aa		11.42	□□□□□ -0.58
NECAP1-223	ENST00000640091	INO80B	Q9C086	356 aa	Predicted RBP	11.42	□□□□□ -0.58
NECAP1-223	ENST00000640091	HAPLN2	Q9GZV7	340 aa		11.42	□□□□□ -0.58
NECAP1-223	ENST00000640091	FAM49A	Q9H0Q0	323 aa	Predicted RBP	11.42	□□□□□ -0.58
NECAP1-223	ENST00000640091	AGPAT5	Q9NUQ2	364 aa		11.42	□□□□□ -0.58
NECAP1-223	ENST00000640091	CGN	Q9P2M7	1197 aa	Known RBP	11.42	□□□□□ -0.58
NECAP1-223	ENST00000640091	ANKFY1	Q9P2R3	1169 aa		11.42	□□□□□ -0.58
NECAP1-223	ENST00000640091	HDAC6	Q9UBN7	1215 aa		11.42	□□□□□ -0.58
NECAP1-223	ENST00000640091	SIK3	Q9Y2K2	1263 aa		11.42	□□□□□ -0.58
NECAP1-223	ENST00000640091	RRN3P2	A6NIE6	340 aa		11.42	□□□□□ -0.58
NECAP1-223	ENST00000640091	HAS3	O00219	553 aa		11.42	□□□□□ -0.58
NECAP1-223	ENST00000640091	ASAP2	O43150	1006 aa		11.42	□□□□□ -0.58
NECAP1-223	ENST00000640091	TREH	O43280	583 aa		11.42	□□□□□ -0.58
NECAP1-223	ENST00000640091	AFP	P02771	609 aa	Known RBP	11.42	□□□□□ -0.58
NECAP1-223	ENST00000640091	HMGCR	P04035	888 aa		11.42	□□□□□ -0.58
NECAP1-223	ENST00000640091	MATR3	P43243	847 aa	Known RBP eCLIP	11.42	□□□□□ -0.58	6e-7	■■■■□ 26.2
NECAP1-223	ENST00000640091	EFNA5	P52803	228 aa		11.42	□□□□□ -0.58
NECAP1-223	ENST00000640091	NLRP11	P59045	1033 aa	Known RBP	11.42	□□□□□ -0.58
NECAP1-223	ENST00000640091	PTEN	P60484	403 aa		11.42	□□□□□ -0.58
NECAP1-223	ENST00000640091	SNRPF	P62306	86 aa	Known RBP	11.42	□□□□□ -0.58
NECAP1-223	ENST00000640091	CCZ1B	P86790	482 aa		11.42	□□□□□ -0.58
NECAP1-223	ENST00000640091	CCZ1	P86791	482 aa	Predicted RBP	11.42	□□□□□ -0.58
NECAP1-223	ENST00000640091	TFDP1	Q14186	410 aa		11.42	□□□□□ -0.58
NECAP1-223	ENST00000640091	MYBPC2	Q14324	1141 aa		11.42	□□□□□ -0.58
NECAP1-223	ENST00000640091	SNRNP35	Q16560	246 aa	Known RBP	11.42	□□□□□ -0.58
NECAP1-223	ENST00000640091	MAPK6	Q16659	721 aa		11.42	□□□□□ -0.58
NECAP1-223	ENST00000640091	SEZ6	Q53EL9	994 aa		11.42	□□□□□ -0.58
NECAP1-223	ENST00000640091	CDR2L	Q86X02	465 aa	Predicted RBP	11.42	□□□□□ -0.58
NECAP1-223	ENST00000640091	ZBTB8OS	Q8IWT0	167 aa		11.42	□□□□□ -0.58
NECAP1-223	ENST00000640091	C7orf31	Q8N865	590 aa		11.42	□□□□□ -0.58
NECAP1-223	ENST00000640091	CCDC150	Q8NCX0	1101 aa		11.42	□□□□□ -0.58
NECAP1-223	ENST00000640091	FAM213A	Q9BRX8	229 aa		11.42	□□□□□ -0.58
NECAP1-223	ENST00000640091	CCDC113	Q9H0I3	377 aa		11.42	□□□□□ -0.58
NECAP1-223	ENST00000640091	SPC25	Q9HBM1	224 aa		11.42	□□□□□ -0.58
NECAP1-223	ENST00000640091	TRIM17	Q9Y577	477 aa		11.42	□□□□□ -0.58
NECAP1-223	ENST00000640091	EVPL	Q92817	2033 aa		11.41	□□□□□ -0.58
NECAP1-223	ENST00000640091	B4GALT5	O43286	388 aa		11.41	□□□□□ -0.58
NECAP1-223	ENST00000640091	ADAMTS4	O75173	837 aa		11.41	□□□□□ -0.58
NECAP1-223	ENST00000640091	ADRB2	P07550	413 aa		11.41	□□□□□ -0.58
NECAP1-223	ENST00000640091	HARS	P12081	509 aa	Known RBP	11.41	□□□□□ -0.58
NECAP1-223	ENST00000640091	MSN	P26038	577 aa	Known RBP	11.41	□□□□□ -0.58
NECAP1-223	ENST00000640091	ABCD1	P33897	745 aa		11.41	□□□□□ -0.58
NECAP1-223	ENST00000640091	ACOT2	P49753	483 aa		11.41	□□□□□ -0.58
NECAP1-223	ENST00000640091	BFSP1	Q12934	665 aa		11.41	□□□□□ -0.58
NECAP1-223	ENST00000640091	KCNA10	Q16322	511 aa		11.41	□□□□□ -0.58
NECAP1-223	ENST00000640091	CDCA2	Q69YH5	1023 aa	Predicted RBP	11.41	□□□□□ -0.58
NECAP1-223	ENST00000640091	RUFY4	Q6ZNE9	571 aa		11.41	□□□□□ -0.58
NECAP1-223	ENST00000640091	ZBTB33	Q86T24	672 aa		11.41	□□□□□ -0.58
NECAP1-223	ENST00000640091	PLEKHO2	Q8TD55	490 aa		11.41	□□□□□ -0.58
NECAP1-223	ENST00000640091	TMEM174	Q8WUU8	243 aa		11.41	□□□□□ -0.58
NECAP1-223	ENST00000640091	NLRP7	Q8WX94	980 aa		11.41	□□□□□ -0.58
NECAP1-223	ENST00000640091	CCDC127	Q96BQ5	260 aa		11.41	□□□□□ -0.58
NECAP1-223	ENST00000640091	POP1	Q99575	1024 aa	Known RBP	11.41	□□□□□ -0.58
NECAP1-223	ENST00000640091	TCHP	Q9BT92	498 aa		11.41	□□□□□ -0.58
NECAP1-223	ENST00000640091	BEGAIN	Q9BUH8	593 aa		11.41	□□□□□ -0.58
NECAP1-223	ENST00000640091	SAGE1	Q9NXZ1	904 aa		11.41	□□□□□ -0.58
NECAP1-223	ENST00000640091	PHLPP2	Q6ZVD8	1323 aa		11.41	□□□□□ -0.58
NECAP1-223	ENST00000640091	MYC	P01106	439 aa	Predicted RBP	11.41	□□□□□ -0.58
NECAP1-223	ENST00000640091	GNRH1	P01148	92 aa		11.41	□□□□□ -0.58
NECAP1-223	ENST00000640091	PRKCB	P05771	671 aa		11.41	□□□□□ -0.58
NECAP1-223	ENST00000640091	ASGR1	P07306	291 aa		11.41	□□□□□ -0.58
NECAP1-223	ENST00000640091	CYP2C9	P11712	490 aa		11.41	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 21 ms