RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 DCDC2CA8MYV0 355 aa8.34□□□□□ -1.07
NECAP1-220ENST00000639841 H0YIN7 160 aa8.34□□□□□ -1.07
NECAP1-220ENST00000639841 SRGAP2CP0DJJ0 459 aa8.34□□□□□ -1.07
NECAP1-220ENST00000639841 TSHRP16473 764 aa8.34□□□□□ -1.07
NECAP1-220ENST00000639841 HOXC12P31275 282 aa8.34□□□□□ -1.07
NECAP1-220ENST00000639841 CTSOP43234 321 aaPredicted RBP8.34□□□□□ -1.07
NECAP1-220ENST00000639841 PKN2Q16513 984 aaKnown RBP8.34□□□□□ -1.07
NECAP1-220ENST00000639841 ANKRD39Q53RE8 183 aa8.34□□□□□ -1.07
NECAP1-220ENST00000639841 NUGGCQ68CJ6 796 aa8.34□□□□□ -1.07
NECAP1-220ENST00000639841 JMJD6Q6NYC1 403 aaPredicted RBP8.34□□□□□ -1.07
NECAP1-220ENST00000639841 PRICKLE2Q7Z3G6 844 aa8.34□□□□□ -1.07
NECAP1-220ENST00000639841 FAM167BQ9BTA0 163 aa8.34□□□□□ -1.07
NECAP1-220ENST00000639841 TJP2Q9UDY2 1190 aa8.34□□□□□ -1.07
NECAP1-220ENST00000639841 MAGED2Q9UNF1 606 aaPredicted RBP8.34□□□□□ -1.07
NECAP1-220ENST00000639841 CLEC3AO75596 197 aa8.33□□□□□ -1.08
NECAP1-220ENST00000639841 FGF18O76093 207 aa8.33□□□□□ -1.08
NECAP1-220ENST00000639841 GRK2P25098 689 aa8.33□□□□□ -1.08
NECAP1-220ENST00000639841 ECI1P42126 302 aa8.33□□□□□ -1.08
NECAP1-220ENST00000639841 NPTX2P47972 431 aa8.33□□□□□ -1.08
NECAP1-220ENST00000639841 PMS2P11Q13670 270 aa8.33□□□□□ -1.08
NECAP1-220ENST00000639841 STARD3Q14849 445 aa8.33□□□□□ -1.08
NECAP1-220ENST00000639841 WDR44Q5JSH3 913 aa8.33□□□□□ -1.08
NECAP1-220ENST00000639841 HFE2Q6ZVN8 426 aa8.33□□□□□ -1.08
NECAP1-220ENST00000639841 SYTL1Q8IYJ3 562 aa8.33□□□□□ -1.08
NECAP1-220ENST00000639841 ANKLE1Q8NAG6 615 aa8.33□□□□□ -1.08
NECAP1-220ENST00000639841 AFAP1L1Q8TED9 768 aa8.33□□□□□ -1.08
NECAP1-220ENST00000639841 ELMO3Q96BJ8 720 aa8.33□□□□□ -1.08
NECAP1-220ENST00000639841 VMP1Q96GC9 406 aa8.33□□□□□ -1.08
NECAP1-220ENST00000639841 PLSCR4Q9NRQ2 329 aa8.33□□□□□ -1.08
NECAP1-220ENST00000639841 AASSQ9UDR5 926 aa8.33□□□□□ -1.08
NECAP1-220ENST00000639841 ITGB1BP2Q9UKP3 347 aa8.33□□□□□ -1.08
NECAP1-220ENST00000639841 COL15A1P39059 1388 aa8.33□□□□□ -1.08
NECAP1-220ENST00000639841 SCN4AP35499 1836 aa8.33□□□□□ -1.08
NECAP1-220ENST00000639841 AFDNP55196 1824 aaKnown RBP8.33□□□□□ -1.08
NECAP1-220ENST00000639841 SPDYE3A6NKU9 549 aa8.33□□□□□ -1.08
NECAP1-220ENST00000639841 MAN1A2O60476 641 aa8.33□□□□□ -1.08
NECAP1-220ENST00000639841 NDUFS2O75306 463 aa8.33□□□□□ -1.08
NECAP1-220ENST00000639841 STARD3NLO95772 234 aa8.33□□□□□ -1.08
NECAP1-220ENST00000639841 HSPA1AP0DMV8 641 aaKnown RBP8.33□□□□□ -1.08
NECAP1-220ENST00000639841 HSPA1BP0DMV9 641 aaKnown RBP8.33□□□□□ -1.08
NECAP1-220ENST00000639841 MTNR1BP49286 362 aa8.33□□□□□ -1.08
NECAP1-220ENST00000639841 SRSF2Q01130 221 aaKnown RBP8.33□□□□□ -1.08
NECAP1-220ENST00000639841 DDR1Q08345 913 aa8.33□□□□□ -1.08
NECAP1-220ENST00000639841 PGS1Q32NB8 556 aa8.33□□□□□ -1.08
NECAP1-220ENST00000639841 HECTD3Q5T447 861 aa8.33□□□□□ -1.08
NECAP1-220ENST00000639841 APOA5Q6Q788 366 aa8.33□□□□□ -1.08
NECAP1-220ENST00000639841 LRRTM4Q86VH4 590 aa8.33□□□□□ -1.08
NECAP1-220ENST00000639841 MCATQ8IVS2 390 aaKnown RBP8.33□□□□□ -1.08
NECAP1-220ENST00000639841 OR10H5Q8NGA6 315 aa8.33□□□□□ -1.08
NECAP1-220ENST00000639841 UCMAQ8WVF2 138 aa8.33□□□□□ -1.08
NECAP1-220ENST00000639841 ZNF622Q969S3 477 aaKnown RBP eCLIP8.33□□□□□ -1.08
NECAP1-220ENST00000639841 RADILQ96JH8 1075 aa8.33□□□□□ -1.08
NECAP1-220ENST00000639841 TREX2Q9BQ50 279 aaPredicted RBP8.33□□□□□ -1.08
NECAP1-220ENST00000639841 SDF4Q9BRK5 362 aa8.33□□□□□ -1.08
NECAP1-220ENST00000639841 CCDC86Q9H6F5 360 aaKnown RBP8.33□□□□□ -1.08
NECAP1-220ENST00000639841 CNTD2Q9H8S5 307 aa8.33□□□□□ -1.08
NECAP1-220ENST00000639841 DBNDD1Q9H9R9 158 aa8.33□□□□□ -1.08
NECAP1-220ENST00000639841 DCP1AQ9NPI6 582 aaPredicted RBP8.33□□□□□ -1.08
NECAP1-220ENST00000639841 NSMCE4AQ9NXX6 385 aa8.33□□□□□ -1.08
NECAP1-220ENST00000639841 PADI4Q9UM07 663 aa8.33□□□□□ -1.08
NECAP1-220ENST00000639841 SCN7AQ01118 1682 aa8.32□□□□□ -1.08
NECAP1-220ENST00000639841 TRIM64A6NGJ6 449 aa8.32□□□□□ -1.08
NECAP1-220ENST00000639841 TRIM64BA6NI03 449 aa8.32□□□□□ -1.08
NECAP1-220ENST00000639841 CHL1O00533 1208 aa8.32□□□□□ -1.08
NECAP1-220ENST00000639841 DDX3XO00571 662 aaKnown RBP eCLIP8.32□□□□□ -1.08
NECAP1-220ENST00000639841 FFAR2O15552 330 aa8.32□□□□□ -1.08
NECAP1-220ENST00000639841 MGEA5O60502 916 aa8.32□□□□□ -1.08
NECAP1-220ENST00000639841 HMMRO75330 724 aa8.32□□□□□ -1.08
NECAP1-220ENST00000639841 EOMESO95936 686 aa8.32□□□□□ -1.08
NECAP1-220ENST00000639841 MYF5P13349 255 aa8.32□□□□□ -1.08
NECAP1-220ENST00000639841 OSMP13725 252 aa8.32□□□□□ -1.08
NECAP1-220ENST00000639841 IDEP14735 1019 aa8.32□□□□□ -1.08
NECAP1-220ENST00000639841 ZNF131P52739 623 aa8.32□□□□□ -1.08
NECAP1-220ENST00000639841 PHC1P78364 1004 aa8.32□□□□□ -1.08
NECAP1-220ENST00000639841 SMAD3P84022 425 aaKnown RBP8.32□□□□□ -1.08
NECAP1-220ENST00000639841 PLIN5Q00G26 463 aa8.32□□□□□ -1.08
NECAP1-220ENST00000639841 KIF23Q02241 960 aaPredicted RBP8.32□□□□□ -1.08
NECAP1-220ENST00000639841 POLD3Q15054 466 aaPredicted RBP8.32□□□□□ -1.08
NECAP1-220ENST00000639841 SMAD2Q15796 467 aaKnown RBP8.32□□□□□ -1.08
NECAP1-220ENST00000639841 IQCEQ6IPM2 695 aa8.32□□□□□ -1.08
NECAP1-220ENST00000639841 C12orf40Q86WS4 652 aa8.32□□□□□ -1.08
NECAP1-220ENST00000639841 LIX1LQ8IVB5 337 aa8.32□□□□□ -1.08
NECAP1-220ENST00000639841 TEX11Q8IYF3 940 aa8.32□□□□□ -1.08
NECAP1-220ENST00000639841 BAHD1Q8TBE0 780 aaPredicted RBP8.32□□□□□ -1.08
NECAP1-220ENST00000639841 CCDC140Q96MF4 163 aa8.32□□□□□ -1.08
NECAP1-220ENST00000639841 BTBD1Q9H0C5 482 aa8.32□□□□□ -1.08
NECAP1-220ENST00000639841 GPAMQ9HCL2 828 aa8.32□□□□□ -1.08
NECAP1-220ENST00000639841 GP6Q9HCN6 339 aa8.32□□□□□ -1.08
NECAP1-220ENST00000639841 TIMMDC1Q9NPL8 285 aa8.32□□□□□ -1.08
NECAP1-220ENST00000639841 DNAJC28Q9NX36 388 aa8.32□□□□□ -1.08
NECAP1-220ENST00000639841 ABCF2Q9UG63 623 aa8.32□□□□□ -1.08
NECAP1-220ENST00000639841 UBR2Q8IWV8 1755 aa8.32□□□□□ -1.08
NECAP1-220ENST00000639841 HNRNPLP14866 589 aaKnown RBP eCLIP8.31□□□□□ -1.08
NECAP1-220ENST00000639841 SPARCL1Q14515 664 aa8.31□□□□□ -1.08
NECAP1-220ENST00000639841 UAP1L1Q3KQV9 507 aa8.31□□□□□ -1.08
NECAP1-220ENST00000639841 MFSD4BQ5TF39 518 aa8.31□□□□□ -1.08
NECAP1-220ENST00000639841 CEP135Q66GS9 1140 aa8.31□□□□□ -1.08
NECAP1-220ENST00000639841 RAB44Q7Z6P3 723 aaPredicted RBP8.31□□□□□ -1.08
NECAP1-220ENST00000639841 RNF152Q8N8N0 203 aa8.31□□□□□ -1.08
NECAP1-220ENST00000639841 SSH3Q8TE77 659 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms