RNA–Protein interactions for RNA: ENST00000638755.1

PAX6-238, Transcript of paired box 6, human

TSL 5 BASIC

Gene PAX6, Length 1,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAX6-238	ENST00000638755	NRL	P54845	237 aa		13.27	□□□□□ -0.29
PAX6-238	ENST00000638755	PFKP	Q01813	784 aa		13.27	□□□□□ -0.29
PAX6-238	ENST00000638755	RSPO2	Q6UXX9	243 aa	Predicted RBP	13.27	□□□□□ -0.29
PAX6-238	ENST00000638755	GLYCTK	Q8IVS8	523 aa		13.27	□□□□□ -0.29
PAX6-238	ENST00000638755	CMTR1	Q8N1G2	835 aa	Known RBP	13.27	□□□□□ -0.29
PAX6-238	ENST00000638755	LINC01465	Q8N7H1	131 aa		13.27	□□□□□ -0.29
PAX6-238	ENST00000638755	CTCFL	Q8NI51	663 aa	Predicted RBP	13.27	□□□□□ -0.29
PAX6-238	ENST00000638755	URGCP	Q8TCY9	931 aa		13.27	□□□□□ -0.29
PAX6-238	ENST00000638755	KXD1	Q9BQD3	176 aa		13.27	□□□□□ -0.29
PAX6-238	ENST00000638755	PRKD2	Q9BZL6	878 aa		13.27	□□□□□ -0.29
PAX6-238	ENST00000638755	CHST12	Q9NRB3	414 aa		13.27	□□□□□ -0.29
PAX6-238	ENST00000638755	CDH7	Q9ULB5	785 aa		13.27	□□□□□ -0.29
PAX6-238	ENST00000638755	CEP131	Q9UPN4	1083 aa		13.27	□□□□□ -0.29
PAX6-238	ENST00000638755	SSX2IP	Q9Y2D8	614 aa		13.27	□□□□□ -0.29
PAX6-238	ENST00000638755	PRG3	Q9Y2Y8	225 aa	Predicted RBP	13.27	□□□□□ -0.29
PAX6-238	ENST00000638755	MAFB	Q9Y5Q3	323 aa	Predicted RBP	13.27	□□□□□ -0.29
PAX6-238	ENST00000638755	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	13.27	□□□□□ -0.29
PAX6-238	ENST00000638755	TGM5	O43548	720 aa		13.26	□□□□□ -0.29
PAX6-238	ENST00000638755	PLEKHA8P1	O95397	391 aa		13.26	□□□□□ -0.29
PAX6-238	ENST00000638755	SKI	P12755	728 aa		13.26	□□□□□ -0.29
PAX6-238	ENST00000638755	MYH9	P35579	1960 aa	Known RBP	13.26	□□□□□ -0.29
PAX6-238	ENST00000638755	ZNF76	P36508	570 aa		13.26	□□□□□ -0.29
PAX6-238	ENST00000638755	AFF1	P51825	1210 aa	Known RBP	13.26	□□□□□ -0.29
PAX6-238	ENST00000638755	NTHL1	P78549	312 aa		13.26	□□□□□ -0.29
PAX6-238	ENST00000638755	SIM2	Q14190	667 aa	Predicted RBP	13.26	□□□□□ -0.29
PAX6-238	ENST00000638755	SART3	Q15020	963 aa	Known RBP	13.26	□□□□□ -0.29
PAX6-238	ENST00000638755	MTSS1L	Q765P7	747 aa		13.26	□□□□□ -0.29
PAX6-238	ENST00000638755	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	13.26	□□□□□ -0.29
PAX6-238	ENST00000638755	GRASP	Q7Z6J2	395 aa	Predicted RBP	13.26	□□□□□ -0.29
PAX6-238	ENST00000638755	ZNF710	Q8N1W2	664 aa		13.26	□□□□□ -0.29
PAX6-238	ENST00000638755	NELL2	Q99435	816 aa		13.26	□□□□□ -0.29
PAX6-238	ENST00000638755	HERC2P3	Q9BVR0	1158 aa		13.26	□□□□□ -0.29
PAX6-238	ENST00000638755	PLEKHA4	Q9H4M7	779 aa		13.26	□□□□□ -0.29
PAX6-238	ENST00000638755	FAM105A	Q9NUU6	356 aa		13.26	□□□□□ -0.29
PAX6-238	ENST00000638755	ZDHHC7	Q9NXF8	308 aa		13.26	□□□□□ -0.29
PAX6-238	ENST00000638755	PIN4	Q9Y237	131 aa	Known RBP	13.26	□□□□□ -0.29
PAX6-238	ENST00000638755	SOBP	A7XYQ1	873 aa		13.25	□□□□□ -0.29
PAX6-238	ENST00000638755	MEIS1	O00470	390 aa		13.25	□□□□□ -0.29
PAX6-238	ENST00000638755	POMC	P01189	267 aa		13.25	□□□□□ -0.29
PAX6-238	ENST00000638755	AASDH	Q4L235	1098 aa	Predicted RBP	13.25	□□□□□ -0.29
PAX6-238	ENST00000638755	UNQ6494/PRO21346	Q6UXR6	183 aa		13.25	□□□□□ -0.29
PAX6-238	ENST00000638755	ZNF852	Q6ZMS4	543 aa		13.25	□□□□□ -0.29
PAX6-238	ENST00000638755	HEATR3	Q7Z4Q2	680 aa		13.25	□□□□□ -0.29
PAX6-238	ENST00000638755	SRBD1	Q8N5C6	995 aa	Known RBP	13.25	□□□□□ -0.29
PAX6-238	ENST00000638755	HDAC7	Q8WUI4	952 aa		13.25	□□□□□ -0.29
PAX6-238	ENST00000638755	B3GALT6	Q96L58	329 aa		13.25	□□□□□ -0.29
PAX6-238	ENST00000638755	TRAIP	Q9BWF2	469 aa		13.25	□□□□□ -0.29
PAX6-238	ENST00000638755	GCOM2	Q9BZD3	368 aa	Predicted RBP	13.25	□□□□□ -0.29
PAX6-238	ENST00000638755	LY9	Q9HBG7	655 aa		13.25	□□□□□ -0.29
PAX6-238	ENST00000638755	RXFP1	Q9HBX9	757 aa		13.25	□□□□□ -0.29
PAX6-238	ENST00000638755	GABBR1	Q9UBS5	961 aa		13.25	□□□□□ -0.29
PAX6-238	ENST00000638755	TCEAL9	Q9UHQ7	104 aa		13.25	□□□□□ -0.29
PAX6-238	ENST00000638755	NDRG2	Q9UN36	371 aa	Known RBP	13.25	□□□□□ -0.29
PAX6-238	ENST00000638755	DHX15	O43143	795 aa	Known RBP	13.24	□□□□□ -0.29
PAX6-238	ENST00000638755	TDGF1	P13385	188 aa		13.24	□□□□□ -0.29
PAX6-238	ENST00000638755	NCL	P19338	710 aa	Known RBP	13.24	□□□□□ -0.29
PAX6-238	ENST00000638755	SFPQ	P23246	707 aa	Known RBP eCLIP	13.24	□□□□□ -0.29
PAX6-238	ENST00000638755	SMARCA1	P28370	1054 aa		13.24	□□□□□ -0.29
PAX6-238	ENST00000638755	RAB27A	P51159	221 aa		13.24	□□□□□ -0.29
PAX6-238	ENST00000638755	ADCY1	Q08828	1119 aa		13.24	□□□□□ -0.29
PAX6-238	ENST00000638755	FZD5	Q13467	585 aa		13.24	□□□□□ -0.29
PAX6-238	ENST00000638755	PPP2R5D	Q14738	602 aa		13.24	□□□□□ -0.29
PAX6-238	ENST00000638755	RALYL	Q86SE5	291 aa	Known RBP	13.24	□□□□□ -0.29
PAX6-238	ENST00000638755	CCDC82	Q8N4S0	544 aa		13.24	□□□□□ -0.29
PAX6-238	ENST00000638755	FGF13	Q92913	245 aa		13.24	□□□□□ -0.29
PAX6-238	ENST00000638755	PGBD4	Q96DM1	585 aa		13.24	□□□□□ -0.29
PAX6-238	ENST00000638755	LZTS2	Q9BRK4	669 aa		13.24	□□□□□ -0.29
PAX6-238	ENST00000638755	TMEM175	Q9BSA9	504 aa		13.24	□□□□□ -0.29
PAX6-238	ENST00000638755	PHF20	Q9BVI0	1012 aa		13.24	□□□□□ -0.29
PAX6-238	ENST00000638755	HEBP1	Q9NRV9	189 aa		13.24	□□□□□ -0.29
PAX6-238	ENST00000638755	MARCH5	Q9NX47	278 aa		13.24	□□□□□ -0.29
PAX6-238	ENST00000638755	MRPS17	Q9Y2R5	130 aa	Known RBP	13.24	□□□□□ -0.29
PAX6-238	ENST00000638755	MTCL1	Q9Y4B5	1905 aa	Known RBP	13.23	□□□□□ -0.29
PAX6-238	ENST00000638755	IPO5	O00410	1097 aa	Known RBP	13.23	□□□□□ -0.29
PAX6-238	ENST00000638755	ZMYND10	O75800	440 aa		13.23	□□□□□ -0.29
PAX6-238	ENST00000638755	PAPLN	O95428	1278 aa		13.23	□□□□□ -0.29
PAX6-238	ENST00000638755	PSAP	P07602	524 aa		13.23	□□□□□ -0.29
PAX6-238	ENST00000638755	RPL17	P18621	184 aa	Known RBP	13.23	□□□□□ -0.29
PAX6-238	ENST00000638755	OR1G1	P47890	313 aa		13.23	□□□□□ -0.29
PAX6-238	ENST00000638755	DSG1	Q02413	1049 aa		13.23	□□□□□ -0.29
PAX6-238	ENST00000638755	SRSF5	Q13243	272 aa	Known RBP	13.23	□□□□□ -0.29
PAX6-238	ENST00000638755	AGMO	Q6ZNB7	445 aa		13.23	□□□□□ -0.29
PAX6-238	ENST00000638755	PLA2G4D	Q86XP0	818 aa		13.23	□□□□□ -0.29
PAX6-238	ENST00000638755	ZNF654	Q8IZM8	581 aa		13.23	□□□□□ -0.29
PAX6-238	ENST00000638755	FAM167A	Q96KS9	214 aa		13.23	□□□□□ -0.29
PAX6-238	ENST00000638755	ANO3	Q9BYT9	981 aa		13.23	□□□□□ -0.29
PAX6-238	ENST00000638755	KANSL3	Q9P2N6	904 aa		13.23	□□□□□ -0.29
PAX6-238	ENST00000638755	POLI	Q9UNA4	740 aa		13.23	□□□□□ -0.29
PAX6-238	ENST00000638755	SAMM50	Q9Y512	469 aa		13.23	□□□□□ -0.29
PAX6-238	ENST00000638755	PCDHB2	Q9Y5E7	798 aa		13.23	□□□□□ -0.29
PAX6-238	ENST00000638755		A0A087WZ62	844 aa		13.22	□□□□□ -0.29
PAX6-238	ENST00000638755		F8W810	466 aa		13.22	□□□□□ -0.29
PAX6-238	ENST00000638755	HR	O43593	1189 aa		13.22	□□□□□ -0.29
PAX6-238	ENST00000638755	FOXD2	O60548	495 aa	Predicted RBP	13.22	□□□□□ -0.29
PAX6-238	ENST00000638755	ZNF623	O75123	536 aa		13.22	□□□□□ -0.29
PAX6-238	ENST00000638755	DDAH1	O94760	285 aa		13.22	□□□□□ -0.29
PAX6-238	ENST00000638755	RXRA	P19793	462 aa		13.22	□□□□□ -0.29
PAX6-238	ENST00000638755	GNAQ	P50148	359 aa		13.22	□□□□□ -0.29
PAX6-238	ENST00000638755	DRP2	Q13474	957 aa		13.22	□□□□□ -0.29
PAX6-238	ENST00000638755	SF3A2	Q15428	464 aa	Known RBP	13.22	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms