RNA–Protein interactions for RNA: ENST00000636840.1

PNKP-226, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 117 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-226ENST00000636840 FAM105AQ9NUU6 356 aa9.06□□□□□ -0.96
PNKP-226ENST00000636840 KANSL3Q9P2N6 904 aa9.06□□□□□ -0.96
PNKP-226ENST00000636840 USP25Q9UHP3 1055 aa9.06□□□□□ -0.96
PNKP-226ENST00000636840 LOXHD1Q8IVV2 1947 aa9.05□□□□□ -0.96
PNKP-226ENST00000636840 TTC3P53804 2025 aa9.05□□□□□ -0.96
PNKP-226ENST00000636840 A0A1B0GUA9 196 aa9.05□□□□□ -0.96
PNKP-226ENST00000636840 TBKBP1A7MCY6 615 aa9.05□□□□□ -0.96
PNKP-226ENST00000636840 POLR2DO15514 142 aaKnown RBP9.05□□□□□ -0.96
PNKP-226ENST00000636840 GTPBP6O43824 516 aaPredicted RBP9.05□□□□□ -0.96
PNKP-226ENST00000636840 TRAK2O60296 914 aa9.05□□□□□ -0.96
PNKP-226ENST00000636840 ITGA4P13612 1032 aa9.05□□□□□ -0.96
PNKP-226ENST00000636840 IDEP14735 1019 aa9.05□□□□□ -0.96
PNKP-226ENST00000636840 MYOGP15173 224 aa9.05□□□□□ -0.96
PNKP-226ENST00000636840 GAP43P17677 238 aa9.05□□□□□ -0.96
PNKP-226ENST00000636840 NPTX2P47972 431 aa9.05□□□□□ -0.96
PNKP-226ENST00000636840 TAP1Q03518 808 aa9.05□□□□□ -0.96
PNKP-226ENST00000636840 MBTD1Q05BQ5 628 aa9.05□□□□□ -0.96
PNKP-226ENST00000636840 GIT2Q14161 759 aa9.05□□□□□ -0.96
PNKP-226ENST00000636840 ARSHQ5FYA8 562 aa9.05□□□□□ -0.96
PNKP-226ENST00000636840 AXDND1Q5T1B0 1012 aaPredicted RBP9.05□□□□□ -0.96
PNKP-226ENST00000636840 RESP18Q5W5W9 173 aa9.05□□□□□ -0.96
PNKP-226ENST00000636840 CDCA2Q69YH5 1023 aaPredicted RBP9.05□□□□□ -0.96
PNKP-226ENST00000636840 GLB1LQ6UWU2 654 aa9.05□□□□□ -0.96
PNKP-226ENST00000636840 STXBP4Q6ZWJ1 553 aa9.05□□□□□ -0.96
PNKP-226ENST00000636840 DYMQ7RTS9 669 aa9.05□□□□□ -0.96
PNKP-226ENST00000636840 TMCO2Q7Z6W1 182 aaPredicted RBP9.05□□□□□ -0.96
PNKP-226ENST00000636840 FAM178BQ8IXR5 827 aa9.05□□□□□ -0.96
PNKP-226ENST00000636840 URGCPQ8TCY9 931 aa9.05□□□□□ -0.96
PNKP-226ENST00000636840 DDX12PQ92771 950 aa9.05□□□□□ -0.96
PNKP-226ENST00000636840 DHX58Q96C10 678 aa9.05□□□□□ -0.96
PNKP-226ENST00000636840 FAM161BQ96MY7 647 aa9.05□□□□□ -0.96
PNKP-226ENST00000636840 FAM193BQ96PV7 902 aaPredicted RBP9.05□□□□□ -0.96
PNKP-226ENST00000636840 REEP2Q9BRK0 252 aa9.05□□□□□ -0.96
PNKP-226ENST00000636840 MRPL9Q9BYD2 267 aaKnown RBP9.05□□□□□ -0.96
PNKP-226ENST00000636840 MRPL4Q9BYD3 311 aaKnown RBP9.05□□□□□ -0.96
PNKP-226ENST00000636840 TNMDQ9H2S6 317 aa9.05□□□□□ -0.96
PNKP-226ENST00000636840 MTMR10Q9NXD2 777 aa9.05□□□□□ -0.96
PNKP-226ENST00000636840 SEL1LQ9UBV2 794 aa9.05□□□□□ -0.96
PNKP-226ENST00000636840 KCNH3Q9ULD8 1083 aa9.05□□□□□ -0.96
PNKP-226ENST00000636840 YBX2Q9Y2T7 364 aaKnown RBP9.05□□□□□ -0.96
PNKP-226ENST00000636840 PCDHB2Q9Y5E7 798 aa9.05□□□□□ -0.96
PNKP-226ENST00000636840 PCDHB12Q9Y5F1 795 aa9.05□□□□□ -0.96
PNKP-226ENST00000636840 ADGRA3Q8IWK6 1321 aa9.05□□□□□ -0.96
PNKP-226ENST00000636840 CNTNAP2Q9UHC6 1331 aa9.05□□□□□ -0.96
PNKP-226ENST00000636840 MICAL3Q7RTP6 2002 aa9.04□□□□□ -0.96
PNKP-226ENST00000636840 NPHP3-ACAD11A0A0J9YXS1 232 aa9.04□□□□□ -0.96
PNKP-226ENST00000636840 LINC01553A4QN01 128 aa9.04□□□□□ -0.96
PNKP-226ENST00000636840 SLC16A4O15374 487 aa9.04□□□□□ -0.96
PNKP-226ENST00000636840 TSPAN1O60635 241 aa9.04□□□□□ -0.96
PNKP-226ENST00000636840 NR1I2O75469 434 aa9.04□□□□□ -0.96
PNKP-226ENST00000636840 MAPTP10636 758 aaKnown RBP9.04□□□□□ -0.96
PNKP-226ENST00000636840 ARF4P18085 180 aaPredicted RBP9.04□□□□□ -0.96
PNKP-226ENST00000636840 HOXA11P31270 313 aaPredicted RBP9.04□□□□□ -0.96
PNKP-226ENST00000636840 MATR3P43243 847 aaKnown RBP eCLIP9.04□□□□□ -0.96
PNKP-226ENST00000636840 ERVK-21P61565 698 aa9.04□□□□□ -0.96
PNKP-226ENST00000636840 RNASELQ05823 741 aaKnown RBP9.04□□□□□ -0.96
PNKP-226ENST00000636840 BMS1Q14692 1282 aaKnown RBP9.04□□□□□ -0.96
PNKP-226ENST00000636840 DCAF4L1Q3SXM0 396 aa9.04□□□□□ -0.96
PNKP-226ENST00000636840 PAN2Q504Q3 1202 aaKnown RBP9.04□□□□□ -0.96
PNKP-226ENST00000636840 NAALADL2Q58DX5 795 aa9.04□□□□□ -0.96
PNKP-226ENST00000636840 HERC4Q5GLZ8 1057 aaPredicted RBP9.04□□□□□ -0.96
PNKP-226ENST00000636840 ATF7IP2Q5U623 682 aa9.04□□□□□ -0.96
PNKP-226ENST00000636840 KANK3Q6NY19 840 aa9.04□□□□□ -0.96
PNKP-226ENST00000636840 SHC4Q6S5L8 630 aa9.04□□□□□ -0.96
PNKP-226ENST00000636840 HAUS6Q7Z4H7 955 aa9.04□□□□□ -0.96
PNKP-226ENST00000636840 MRPL10Q7Z7H8 261 aaKnown RBP9.04□□□□□ -0.96
PNKP-226ENST00000636840 TMEM192Q8IY95 271 aa9.04□□□□□ -0.96
PNKP-226ENST00000636840 DAW1Q8N136 415 aa9.04□□□□□ -0.96
PNKP-226ENST00000636840 FBXO22Q8NEZ5 403 aa9.04□□□□□ -0.96
PNKP-226ENST00000636840 SP7Q8TDD2 431 aaPredicted RBP9.04□□□□□ -0.96
PNKP-226ENST00000636840 LINC01599Q8WXQ3 324 aa9.04□□□□□ -0.96
PNKP-226ENST00000636840 ARNTL2Q8WYA1 636 aa9.04□□□□□ -0.96
PNKP-226ENST00000636840 BSNDQ8WZ55 320 aa9.04□□□□□ -0.96
PNKP-226ENST00000636840 CCDC47Q96A33 483 aaKnown RBP9.04□□□□□ -0.96
PNKP-226ENST00000636840 ZNF689Q96CS4 500 aaPredicted RBP9.04□□□□□ -0.96
PNKP-226ENST00000636840 BICD1Q96G01 975 aa9.04□□□□□ -0.96
PNKP-226ENST00000636840 CPB2Q96IY4 423 aa9.04□□□□□ -0.96
PNKP-226ENST00000636840 PLVAPQ9BX97 442 aa9.04□□□□□ -0.96
PNKP-226ENST00000636840 PARP2Q9UGN5 583 aa9.04□□□□□ -0.96
PNKP-226ENST00000636840 PCDHB13Q9Y5F0 798 aa9.04□□□□□ -0.96
PNKP-226ENST00000636840 A0A1B0GVL5 298 aa9.03□□□□□ -0.96
PNKP-226ENST00000636840 A0A1W2PQ27 194 aa9.03□□□□□ -0.96
PNKP-226ENST00000636840 A0A1W2PQ64 194 aa9.03□□□□□ -0.96
PNKP-226ENST00000636840 A0A1W2PQD8 194 aa9.03□□□□□ -0.96
PNKP-226ENST00000636840 MYMKA6NI61 221 aa9.03□□□□□ -0.96
PNKP-226ENST00000636840 NPTXRO95502 500 aa9.03□□□□□ -0.96
PNKP-226ENST00000636840 SLFN14P0C7P3 912 aa9.03□□□□□ -0.96
PNKP-226ENST00000636840 IGFBP4P22692 258 aa9.03□□□□□ -0.96
PNKP-226ENST00000636840 CTNNB1P35222 781 aa9.03□□□□□ -0.96
PNKP-226ENST00000636840 BMPR1AP36894 532 aa9.03□□□□□ -0.96
PNKP-226ENST00000636840 SYKP43405 635 aa9.03□□□□□ -0.96
PNKP-226ENST00000636840 ALDH7A1P49419 539 aaKnown RBP9.03□□□□□ -0.96
PNKP-226ENST00000636840 ZNF131P52739 623 aa9.03□□□□□ -0.96
PNKP-226ENST00000636840 NCKAP1LP55160 1127 aa9.03□□□□□ -0.96
PNKP-226ENST00000636840 CACNB1Q02641 598 aaPredicted RBP9.03□□□□□ -0.96
PNKP-226ENST00000636840 MAPK7Q13164 816 aa9.03□□□□□ -0.96
PNKP-226ENST00000636840 AMHR2Q16671 573 aa9.03□□□□□ -0.96
PNKP-226ENST00000636840 KYAT1Q16773 422 aa9.03□□□□□ -0.96
PNKP-226ENST00000636840 PTPROQ16827 1216 aa9.03□□□□□ -0.96
PNKP-226ENST00000636840 TPRNQ4KMQ1 711 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms