RNA–Protein interactions for RNA: ENST00000636539.1

ARHGEF9-227, Transcript of Cdc42 guanine nucleotide exchange factor 9, human

TSL 5

Gene ARHGEF9, Length 100 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF9-227	ENST00000636539	MFSD10	Q14728	455 aa		11.63	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	SYCP1	Q15431	976 aa		11.63	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	FSCN1	Q16658	493 aa	Known RBP	11.63	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	KIAA0753	Q2KHM9	967 aa		11.63	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	TCERG1L	Q5VWI1	586 aa		11.63	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	RHPN2	Q8IUC4	686 aa		11.63	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	SLC9A9	Q8IVB4	645 aa		11.63	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	TRIM59	Q8IWR1	403 aa		11.63	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	C12orf56	Q8IXR9	622 aa		11.63	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	XXYLT1	Q8NBI6	393 aa		11.63	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	CACTIN	Q8WUQ7	758 aa	Known RBP	11.63	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	NLRP4	Q96MN2	994 aa		11.63	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	MAP7D2	Q96T17	732 aa		11.63	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	CBWD1	Q9BRT8	395 aa		11.63	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	KATNAL1	Q9BW62	490 aa		11.63	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	KCNF1	Q9H3M0	494 aa		11.63	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	TMEM134	Q9H6X4	195 aa		11.63	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	DMAC2	Q9NW81	257 aa		11.63	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	HSPBP1	Q9NZL4	362 aa		11.63	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	ZKSCAN5	Q9Y2L8	839 aa		11.63	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	RRN3P2	A6NIE6	340 aa		11.62	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	ANKRD63	C9JTQ0	380 aa		11.62	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	TULP1	O00294	542 aa	Predicted RBP	11.62	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	HNRNPDL	O14979	420 aa	Known RBP	11.62	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	ASAP2	O43150	1006 aa		11.62	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	SEPT4	O43236	478 aa		11.62	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	KPNA6	O60684	536 aa		11.62	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	SGPL1	O95470	568 aa		11.62	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	AFP	P02771	609 aa	Known RBP	11.62	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	TFRC	P02786	760 aa	Known RBP	11.62	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	SMIM10L2A	P0DMW4	78 aa		11.62	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	SMIM10L2B	P0DMW5	78 aa		11.62	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	PRKAR2A	P13861	404 aa	Known RBP	11.62	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	MATR3	P43243	847 aa	Known RBP eCLIP	11.62	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	EFNA5	P52803	228 aa		11.62	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	CACNB2	Q08289	660 aa	Predicted RBP	11.62	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	RBL2	Q08999	1139 aa		11.62	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	GOLGA8F	Q08AF8	430 aa		11.62	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	GOLGA8DP	Q0D2H9	430 aa		11.62	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	LRMP	Q12912	555 aa		11.62	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	TRIM32	Q13049	653 aa		11.62	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	MKRN4P	Q13434	485 aa	Predicted RBP	11.62	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	TMEM132A	Q24JP5	1023 aa		11.62	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	MTHFD1L	Q6UB35	978 aa		11.62	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	LRRC8A	Q8IWT6	810 aa		11.62	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	RNF149	Q8NC42	400 aa		11.62	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	U2AF1L4	Q8WU68	220 aa	Known RBP	11.62	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	CPLX3	Q8WVH0	158 aa		11.62	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	POMGNT1	Q8WZA1	660 aa		11.62	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	ZBTB10	Q96DT7	871 aa		11.62	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	NUP58	Q9BVL2	599 aa		11.62	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	AKT3	Q9Y243	479 aa		11.62	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	ESPN	B1AK53	854 aa		11.61	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	HMGCR	P04035	888 aa		11.61	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	PRKCB	P05771	671 aa		11.61	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	TRIM21	P19474	475 aa	Known RBP	11.61	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	PHKA2	P46019	1235 aa		11.61	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	ADK	P55263	362 aa	Known RBP	11.61	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	GJA9	P57773	515 aa		11.61	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	IRX5	P78411	483 aa	Predicted RBP	11.61	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	HSP90AA2P	Q14568	343 aa	Predicted RBP	11.61	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	MAPK6	Q16659	721 aa		11.61	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	CDCA2	Q69YH5	1023 aa	Predicted RBP	11.61	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	SLFN12L	Q6IEE8	588 aa		11.61	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	TAS1R3	Q7RTX0	852 aa		11.61	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	UBE2Q1	Q7Z7E8	422 aa		11.61	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	RDH13	Q8NBN7	331 aa		11.61	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	KAT2B	Q92831	832 aa		11.61	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	KCNN1	Q92952	543 aa		11.61	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	ZNF668	Q96K58	619 aa	Predicted RBP	11.61	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	SCLT1	Q96NL6	688 aa		11.61	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	ERGIC2	Q96RQ1	377 aa		11.61	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	MRPL4	Q9BYD3	311 aa	Known RBP	11.61	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	MMRN2	Q9H8L6	949 aa		11.61	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	SETD4	Q9NVD3	440 aa		11.61	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	RANBP2	P49792	3224 aa	Known RBP	11.61	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	NRCAM	Q92823	1304 aa		11.6	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	GOLGA8IP	A6NC78	632 aa		11.6	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	MYADML2	A6NDP7	307 aa		11.6	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	GOLGA8J	A6NMD2	632 aa		11.6	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	INO80B-WBP1	J3KQ70	363 aa		11.6	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	PGK1	P00558	417 aa		11.6	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	PIGR	P01833	764 aa		11.6	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	MYCN	P04198	464 aa	Predicted RBP	11.6	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	INHA	P05111	366 aa		11.6	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	SKIL	P12757	684 aa		11.6	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	GART	P22102	1010 aa		11.6	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	CCND3	P30281	292 aa	Predicted RBP	11.6	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	KLK7	P49862	253 aa		11.6	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	KCNH2	Q12809	1159 aa		11.6	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	GNAS	Q5JWF2	1037 aa		11.6	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	NFRKB	Q6P4R8	1299 aa		11.6	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	CHRDL2	Q6WN34	429 aa		11.6	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	INTS8	Q75QN2	995 aa	Known RBP	11.6	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	CNGA4	Q8IV77	575 aa		11.6	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	CCDC112	Q8NEF3	446 aa		11.6	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	TMEM174	Q8WUU8	243 aa		11.6	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	LMBR1	Q8WVP7	490 aa		11.6	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	IQCD	Q96DY2	449 aa		11.6	□□□□□ -0.55
ARHGEF9-227	ENST00000636539	SAAL1	Q96ER3	474 aa		11.6	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms