RNA–Protein interactions for RNA: ENST00000626716.1

R3HDM4-208, Transcript of R3H domain containing 4, humanhuman

TSL 5 BASIC

Gene R3HDM4, Length 138 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-208ENST00000626716 HOXA11P31270 313 aaPredicted RBP28.2■■■□□ 2.1
R3HDM4-208ENST00000626716 C12orf76Q8N812 135 aaPredicted RBP28.2■■■□□ 2.1
R3HDM4-208ENST00000626716 SLC22A17Q8WUG5 538 aa28.2■■■□□ 2.1
R3HDM4-208ENST00000626716 TCP11Q8WWU5 503 aa28.2■■■□□ 2.1
R3HDM4-208ENST00000626716 KANSL3Q9P2N6 904 aa28.2■■■□□ 2.1
R3HDM4-208ENST00000626716 C2CD4DB7Z1M9 353 aa28.19■■■□□ 2.1
R3HDM4-208ENST00000626716 ALDH2P05091 517 aa28.19■■■□□ 2.1
R3HDM4-208ENST00000626716 EPCAMP16422 314 aa28.19■■■□□ 2.1
R3HDM4-208ENST00000626716 ATAT1Q5SQI0 421 aa28.19■■■□□ 2.1
R3HDM4-208ENST00000626716 NCAPH2Q6IBW4 605 aa28.19■■■□□ 2.1
R3HDM4-208ENST00000626716 POTEDQ86YR6 584 aa28.19■■■□□ 2.1
R3HDM4-208ENST00000626716 SLFN12Q8IYM2 578 aa28.19■■■□□ 2.1
R3HDM4-208ENST00000626716 KREMEN2Q8NCW0 462 aa28.19■■■□□ 2.1
R3HDM4-208ENST00000626716 DYDC2Q96IM9 177 aa28.19■■■□□ 2.1
R3HDM4-208ENST00000626716 ZSWIM4Q9H7M6 989 aa28.19■■■□□ 2.1
R3HDM4-208ENST00000626716 RSAD1Q9HA92 442 aa28.19■■■□□ 2.1
R3HDM4-208ENST00000626716 BMP2KQ9NSY1 1161 aaPredicted RBP28.19■■■□□ 2.1
R3HDM4-208ENST00000626716 ORC3Q9UBD5 711 aaPredicted RBP28.19■■■□□ 2.1
R3HDM4-208ENST00000626716 STK39Q9UEW8 545 aa28.19■■■□□ 2.1
R3HDM4-208ENST00000626716 DTNBO60941 627 aa28.18■■■□□ 2.1
R3HDM4-208ENST00000626716 DDHD2O94830 711 aa28.18■■■□□ 2.1
R3HDM4-208ENST00000626716 CTDNEP1O95476 244 aa28.18■■■□□ 2.1
R3HDM4-208ENST00000626716 WEE2P0C1S8 567 aa28.18■■■□□ 2.1
R3HDM4-208ENST00000626716 XKR9Q5GH70 373 aa28.18■■■□□ 2.1
R3HDM4-208ENST00000626716 EARS2Q5JPH6 523 aaKnown RBP28.18■■■□□ 2.1
R3HDM4-208ENST00000626716 UBXN11Q5T124 520 aa28.18■■■□□ 2.1
R3HDM4-208ENST00000626716 FERMT3Q86UX7 667 aa28.18■■■□□ 2.1
R3HDM4-208ENST00000626716 PPFIBP1Q86W92 1011 aa28.18■■■□□ 2.1
R3HDM4-208ENST00000626716 RNF149Q8NC42 400 aa28.18■■■□□ 2.1
R3HDM4-208ENST00000626716 WASF1Q92558 559 aa28.18■■■□□ 2.1
R3HDM4-208ENST00000626716 FAM193BQ96PV7 902 aaPredicted RBP28.18■■■□□ 2.1
R3HDM4-208ENST00000626716 VN1R3Q9BXE9 311 aa28.18■■■□□ 2.1
R3HDM4-208ENST00000626716 SORCS3Q9UPU3 1222 aa28.18■■■□□ 2.1
R3HDM4-208ENST00000626716 CNTNAP2Q9UHC6 1331 aa28.18■■■□□ 2.1
R3HDM4-208ENST00000626716 KMT2EQ8IZD2 1858 aa28.17■■■□□ 2.1
R3HDM4-208ENST00000626716 ZBTB39O15060 712 aa28.17■■■□□ 2.1
R3HDM4-208ENST00000626716 B4GALT3O60512 393 aa28.17■■■□□ 2.1
R3HDM4-208ENST00000626716 AVPR2P30518 371 aa28.17■■■□□ 2.1
R3HDM4-208ENST00000626716 AFF1P51825 1210 aaKnown RBP28.17■■■□□ 2.1
R3HDM4-208ENST00000626716 SPIRE1Q08AE8 756 aa28.17■■■□□ 2.1
R3HDM4-208ENST00000626716 CTTNQ14247 550 aaKnown RBP28.17■■■□□ 2.1
R3HDM4-208ENST00000626716 EMC2Q15006 297 aa28.17■■■□□ 2.1
R3HDM4-208ENST00000626716 KIAA1841Q6NSI8 718 aa28.17■■■□□ 2.1
R3HDM4-208ENST00000626716 KANK3Q6NY19 840 aa28.17■■■□□ 2.1
R3HDM4-208ENST00000626716 UBALD2Q8IYN6 164 aa28.17■■■□□ 2.1
R3HDM4-208ENST00000626716 TMEM175Q9BSA9 504 aa28.17■■■□□ 2.1
R3HDM4-208ENST00000626716 FAN1Q9Y2M0 1017 aa28.17■■■□□ 2.1
R3HDM4-208ENST00000626716 CACNA1HO95180 2353 aa28.17■■■□□ 2.1
R3HDM4-208ENST00000626716 CYP4A11Q02928 519 aa28.16■■■□□ 2.1
R3HDM4-208ENST00000626716 MTMR3Q13615 1198 aa28.16■■■□□ 2.1
R3HDM4-208ENST00000626716 ANKRD1Q15327 319 aa28.16■■■□□ 2.1
R3HDM4-208ENST00000626716 PTPN14Q15678 1187 aa28.16■■■□□ 2.1
R3HDM4-208ENST00000626716 CABP7Q86V35 215 aa28.16■■■□□ 2.1
R3HDM4-208ENST00000626716 TPH2Q8IWU9 490 aa28.16■■■□□ 2.1
R3HDM4-208ENST00000626716 CNNM3Q8NE01 707 aa28.16■■■□□ 2.1
R3HDM4-208ENST00000626716 MTRQ99707 1265 aa28.16■■■□□ 2.1
R3HDM4-208ENST00000626716 UBN1Q9NPG3 1134 aa28.16■■■□□ 2.1
R3HDM4-208ENST00000626716 DBR1Q9UK59 544 aaKnown RBP28.16■■■□□ 2.1
R3HDM4-208ENST00000626716 SLITRK3O94933 977 aa28.15■■■□□ 2.1
R3HDM4-208ENST00000626716 NCLP19338 710 aaKnown RBP28.15■■■□□ 2.1
R3HDM4-208ENST00000626716 VCPP55072 806 aaKnown RBP28.15■■■□□ 2.1
R3HDM4-208ENST00000626716 TCF15Q12870 199 aa28.15■■■□□ 2.1
R3HDM4-208ENST00000626716 PCBP1Q15365 356 aaKnown RBP eCLIP28.15■■■□□ 2.13e-6■■■□□ 16
R3HDM4-208ENST00000626716 PHOX2BQ99453 314 aa28.15■■■□□ 2.1
R3HDM4-208ENST00000626716 EMILIN2Q9BXX0 1053 aa28.15■■■□□ 2.1
R3HDM4-208ENST00000626716 ERLIN2O94905 339 aa28.14■■■□□ 2.1
R3HDM4-208ENST00000626716 POMCP01189 267 aa28.14■■■□□ 2.1
R3HDM4-208ENST00000626716 AXLP30530 894 aa28.14■■■□□ 2.1
R3HDM4-208ENST00000626716 KRT2P35908 639 aa28.14■■■□□ 2.1
R3HDM4-208ENST00000626716 NR5A1Q13285 461 aa28.14■■■□□ 2.1
R3HDM4-208ENST00000626716 MXD4Q14582 209 aaPredicted RBP28.14■■■□□ 2.1
R3HDM4-208ENST00000626716 ZDHHC14Q8IZN3 488 aa28.14■■■□□ 2.1
R3HDM4-208ENST00000626716 PLCD3Q8N3E9 789 aa28.14■■■□□ 2.1
R3HDM4-208ENST00000626716 KLHL5Q96PQ7 755 aa28.14■■■□□ 2.1
R3HDM4-208ENST00000626716 BRMS1Q9HCU9 246 aa28.14■■■□□ 2.1
R3HDM4-208ENST00000626716 PCDHA12Q9UN75 941 aa28.14■■■□□ 2.1
R3HDM4-208ENST00000626716 USTQ9Y2C2 406 aa28.14■■■□□ 2.1
R3HDM4-208ENST00000626716 FAM205CA6NFA0 338 aa28.13■■■□□ 2.09
R3HDM4-208ENST00000626716 NRP1O14786 923 aa28.13■■■□□ 2.09
R3HDM4-208ENST00000626716 LILRB3O75022 631 aa28.13■■■□□ 2.09
R3HDM4-208ENST00000626716 BRD1O95696 1058 aa28.13■■■□□ 2.09
R3HDM4-208ENST00000626716 ITGA4P13612 1032 aa28.13■■■□□ 2.09
R3HDM4-208ENST00000626716 FDPSP14324 419 aaKnown RBP28.13■■■□□ 2.09
R3HDM4-208ENST00000626716 KLRC2P26717 231 aa28.13■■■□□ 2.09
R3HDM4-208ENST00000626716 ANAPC15P60006 121 aa28.13■■■□□ 2.09
R3HDM4-208ENST00000626716 PTENP60484 403 aa28.13■■■□□ 2.09
R3HDM4-208ENST00000626716 NCBP1Q09161 790 aaKnown RBP28.13■■■□□ 2.09
R3HDM4-208ENST00000626716 TMC5Q6UXY8 1006 aa28.13■■■□□ 2.09
R3HDM4-208ENST00000626716 TDRD5Q8NAT2 981 aaKnown RBP28.13■■■□□ 2.09
R3HDM4-208ENST00000626716 SMG8Q8ND04 991 aaKnown RBP28.13■■■□□ 2.09
R3HDM4-208ENST00000626716 EIF2AK1Q9BQI3 630 aaKnown RBP28.13■■■□□ 2.09
R3HDM4-208ENST00000626716 LIMD1Q9UGP4 676 aa28.13■■■□□ 2.09
R3HDM4-208ENST00000626716 ARID2Q68CP9 1835 aa28.13■■■□□ 2.09
R3HDM4-208ENST00000626716 SSBP05455 408 aaKnown RBP eCLIP28.12■■■□□ 2.09
R3HDM4-208ENST00000626716 CNPP09543 421 aaKnown RBP28.12■■■□□ 2.09
R3HDM4-208ENST00000626716 AK2P54819 239 aa28.12■■■□□ 2.09
R3HDM4-208ENST00000626716 POU5F1BQ06416 359 aa28.12■■■□□ 2.09
R3HDM4-208ENST00000626716 TNFRSF25Q93038 417 aa28.12■■■□□ 2.09
R3HDM4-208ENST00000626716 HSD17B14Q9BPX1 270 aa28.12■■■□□ 2.09
R3HDM4-208ENST00000626716 XPNPEP1Q9NQW7 623 aa28.12■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms