RNA–Protein interactions for RNA: ENST00000625705.1

NPLOC4-221, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5 BASIC

Gene NPLOC4, Length 405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-221ENST00000625705 CCDC39Q9UFE4 941 aa8.02□□□□□ -1.13
NPLOC4-221ENST00000625705 DBR1Q9UK59 544 aaKnown RBP8.02□□□□□ -1.13
NPLOC4-221ENST00000625705 CFAP45Q9UL16 551 aa8.02□□□□□ -1.13
NPLOC4-221ENST00000625705 LRFN2Q9ULH4 789 aa8.02□□□□□ -1.13
NPLOC4-221ENST00000625705 COL4A3BPQ9Y5P4 624 aa8.02□□□□□ -1.13
NPLOC4-221ENST00000625705 PDE4DIPQ5VU43 2346 aa8.02□□□□□ -1.13
NPLOC4-221ENST00000625705 A0A087WZ62 844 aa8.01□□□□□ -1.13
NPLOC4-221ENST00000625705 SPTLC2O15270 562 aa8.01□□□□□ -1.13
NPLOC4-221ENST00000625705 UPP2O95045 317 aa8.01□□□□□ -1.13
NPLOC4-221ENST00000625705 STBD1O95210 358 aa8.01□□□□□ -1.13
NPLOC4-221ENST00000625705 YEATS4O95619 227 aa8.01□□□□□ -1.13
NPLOC4-221ENST00000625705 F12P00748 615 aaPredicted RBP8.01□□□□□ -1.13
NPLOC4-221ENST00000625705 CXCL10P02778 98 aa8.01□□□□□ -1.13
NPLOC4-221ENST00000625705 XRCC6P12956 609 aaKnown RBP eCLIP8.01□□□□□ -1.13
NPLOC4-221ENST00000625705 ZSCAN20P17040 1043 aaPredicted RBP8.01□□□□□ -1.13
NPLOC4-221ENST00000625705 LIG1P18858 919 aa8.01□□□□□ -1.13
NPLOC4-221ENST00000625705 ME1P48163 572 aa8.01□□□□□ -1.13
NPLOC4-221ENST00000625705 GPC3P51654 580 aa8.01□□□□□ -1.13
NPLOC4-221ENST00000625705 WDR5P61964 334 aaKnown RBP8.01□□□□□ -1.13
NPLOC4-221ENST00000625705 KRT85P78386 507 aa8.01□□□□□ -1.13
NPLOC4-221ENST00000625705 NCBP1Q09161 790 aaKnown RBP8.01□□□□□ -1.13
NPLOC4-221ENST00000625705 MGAT3Q09327 533 aa8.01□□□□□ -1.13
NPLOC4-221ENST00000625705 DRP2Q13474 957 aa8.01□□□□□ -1.13
NPLOC4-221ENST00000625705 PKP1Q13835 747 aa8.01□□□□□ -1.13
NPLOC4-221ENST00000625705 DHX8Q14562 1220 aaKnown RBP8.01□□□□□ -1.13
NPLOC4-221ENST00000625705 MXD4Q14582 209 aaPredicted RBP8.01□□□□□ -1.13
NPLOC4-221ENST00000625705 PPP2R5AQ15172 486 aa8.01□□□□□ -1.13
NPLOC4-221ENST00000625705 IL17AQ16552 155 aa8.01□□□□□ -1.13
NPLOC4-221ENST00000625705 LRIT3Q3SXY7 679 aa8.01□□□□□ -1.13
NPLOC4-221ENST00000625705 CATSPER4Q7RTX7 472 aa8.01□□□□□ -1.13
NPLOC4-221ENST00000625705 TRIM46Q7Z4K8 759 aa8.01□□□□□ -1.13
NPLOC4-221ENST00000625705 ZNF410Q86VK4 478 aa8.01□□□□□ -1.13
NPLOC4-221ENST00000625705 RNF149Q8NC42 400 aa8.01□□□□□ -1.13
NPLOC4-221ENST00000625705 FOXJ1Q92949 421 aa8.01□□□□□ -1.13
NPLOC4-221ENST00000625705 IFT74Q96LB3 600 aa8.01□□□□□ -1.13
NPLOC4-221ENST00000625705 YME1L1Q96TA2 773 aa8.01□□□□□ -1.13
NPLOC4-221ENST00000625705 FDXACB1Q9BRP7 624 aaPredicted RBP8.01□□□□□ -1.13
NPLOC4-221ENST00000625705 FTHL17Q9BXU8 183 aa8.01□□□□□ -1.13
NPLOC4-221ENST00000625705 CSRNP2Q9H175 543 aa8.01□□□□□ -1.13
NPLOC4-221ENST00000625705 DHX33Q9H6R0 707 aaKnown RBP8.01□□□□□ -1.13
NPLOC4-221ENST00000625705 PADI3Q9ULW8 664 aa8.01□□□□□ -1.13
NPLOC4-221ENST00000625705 SQORQ9Y6N5 450 aa8.01□□□□□ -1.13
NPLOC4-221ENST00000625705 GRXCR1A8MXD5 290 aa8□□□□□ -1.13
NPLOC4-221ENST00000625705 E9PMD0 336 aa8□□□□□ -1.13
NPLOC4-221ENST00000625705 INO80B-WBP1J3KQ70 363 aa8□□□□□ -1.13
NPLOC4-221ENST00000625705 ASAP2O43150 1006 aa8□□□□□ -1.13
NPLOC4-221ENST00000625705 SLC26A4O43511 780 aa8□□□□□ -1.13
NPLOC4-221ENST00000625705 EYA4O95677 639 aa8□□□□□ -1.13
NPLOC4-221ENST00000625705 STAG3L1P0CL83 205 aa8□□□□□ -1.13
NPLOC4-221ENST00000625705 DARSP14868 501 aaKnown RBP8□□□□□ -1.13
NPLOC4-221ENST00000625705 EIF4BP23588 611 aaKnown RBP8□□□□□ -1.13
NPLOC4-221ENST00000625705 STAT6P42226 847 aa8□□□□□ -1.13
NPLOC4-221ENST00000625705 RABGGTBP53611 331 aa8□□□□□ -1.13
NPLOC4-221ENST00000625705 NUCB2P80303 420 aa8□□□□□ -1.13
NPLOC4-221ENST00000625705 DEFB103AP81534 67 aa8□□□□□ -1.13
NPLOC4-221ENST00000625705 SMAD3P84022 425 aaKnown RBP8□□□□□ -1.13
NPLOC4-221ENST00000625705 DNM1Q05193 864 aaKnown RBP8□□□□□ -1.13
NPLOC4-221ENST00000625705 LAMTOR4Q0VGL1 99 aa8□□□□□ -1.13
NPLOC4-221ENST00000625705 NNTQ13423 1086 aa8□□□□□ -1.13
NPLOC4-221ENST00000625705 SLC39A14Q15043 492 aa8□□□□□ -1.13
NPLOC4-221ENST00000625705 KARSQ15046 597 aaKnown RBP8□□□□□ -1.13
NPLOC4-221ENST00000625705 PTPAQ15257 358 aa8□□□□□ -1.13
NPLOC4-221ENST00000625705 SPECC1Q5M775 1068 aa8□□□□□ -1.13
NPLOC4-221ENST00000625705 PPP2R2DQ66LE6 453 aa8□□□□□ -1.13
NPLOC4-221ENST00000625705 ATL3Q6DD88 541 aa8□□□□□ -1.13
NPLOC4-221ENST00000625705 KSR1Q8IVT5 923 aa8□□□□□ -1.13
NPLOC4-221ENST00000625705 HERC6Q8IVU3 1022 aa8□□□□□ -1.13
NPLOC4-221ENST00000625705 ZBTB8OSQ8IWT0 167 aa8□□□□□ -1.13
NPLOC4-221ENST00000625705 RNF169Q8NCN4 708 aa8□□□□□ -1.13
NPLOC4-221ENST00000625705 DEPTORQ8TB45 409 aa8□□□□□ -1.13
NPLOC4-221ENST00000625705 PHOSPHO2Q8TCD6 241 aa8□□□□□ -1.13
NPLOC4-221ENST00000625705 KCNG4Q8TDN1 519 aa8□□□□□ -1.13
NPLOC4-221ENST00000625705 PRPF31Q8WWY3 499 aaKnown RBP8□□□□□ -1.13
NPLOC4-221ENST00000625705 TIFAQ96CG3 184 aa8□□□□□ -1.13
NPLOC4-221ENST00000625705 SPATA32Q96LK8 384 aa8□□□□□ -1.13
NPLOC4-221ENST00000625705 ZHX3Q9H4I2 956 aa8□□□□□ -1.13
NPLOC4-221ENST00000625705 AGO3Q9H9G7 860 aaKnown RBP8□□□□□ -1.13
NPLOC4-221ENST00000625705 SLC28A3Q9HAS3 691 aa8□□□□□ -1.13
NPLOC4-221ENST00000625705 GPRC5CQ9NQ84 441 aa8□□□□□ -1.13
NPLOC4-221ENST00000625705 FBXO2Q9UK22 296 aaPredicted RBP8□□□□□ -1.13
NPLOC4-221ENST00000625705 ST3GAL5Q9UNP4 418 aa8□□□□□ -1.13
NPLOC4-221ENST00000625705 PIN4Q9Y237 131 aaKnown RBP8□□□□□ -1.13
NPLOC4-221ENST00000625705 NOC2LQ9Y3T9 749 aaKnown RBP8□□□□□ -1.13
NPLOC4-221ENST00000625705 MICAL3Q7RTP6 2002 aa8□□□□□ -1.13
NPLOC4-221ENST00000625705 IGKV6-21A0A0C4DH24 114 aa7.99□□□□□ -1.13
NPLOC4-221ENST00000625705 CCDC169A6NNP5 214 aa7.99□□□□□ -1.13
NPLOC4-221ENST00000625705 SOX1O00570 391 aaPredicted RBP7.99□□□□□ -1.13
NPLOC4-221ENST00000625705 TERTO14746 1132 aaKnown RBP7.99□□□□□ -1.13
NPLOC4-221ENST00000625705 CUTAO60888 179 aa7.99□□□□□ -1.13
NPLOC4-221ENST00000625705 TBCAO75347 108 aaKnown RBP7.99□□□□□ -1.13
NPLOC4-221ENST00000625705 GPR32O75388 356 aa7.99□□□□□ -1.13
NPLOC4-221ENST00000625705 CSDE1O75534 798 aaKnown RBP7.99□□□□□ -1.13
NPLOC4-221ENST00000625705 CYP11B2P19099 503 aa7.99□□□□□ -1.13
NPLOC4-221ENST00000625705 PLCG1P19174 1290 aa7.99□□□□□ -1.13
NPLOC4-221ENST00000625705 FGFR4P22455 802 aa7.99□□□□□ -1.13
NPLOC4-221ENST00000625705 NASPP49321 788 aaPredicted RBP7.99□□□□□ -1.13
NPLOC4-221ENST00000625705 GRIN1Q05586 938 aa7.99□□□□□ -1.13
NPLOC4-221ENST00000625705 RAD51AP2Q09MP3 1159 aa7.99□□□□□ -1.13
NPLOC4-221ENST00000625705 DMP1Q13316 513 aaPredicted RBP7.99□□□□□ -1.13
NPLOC4-221ENST00000625705 GRB10Q13322 594 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms