RNA–Protein interactions for RNA: ENST00000624953.1

CDKL5-208, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 567 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-208ENST00000624953 PTPDC1A2A3K4 754 aa4.39□□□□□ -1.71
CDKL5-208ENST00000624953 SCDO00767 359 aa4.39□□□□□ -1.71
CDKL5-208ENST00000624953 TGM5O43548 720 aa4.39□□□□□ -1.71
CDKL5-208ENST00000624953 CUTAO60888 179 aa4.39□□□□□ -1.71
CDKL5-208ENST00000624953 BPIP17213 487 aa4.39□□□□□ -1.71
CDKL5-208ENST00000624953 GJA9P57773 515 aa4.39□□□□□ -1.71
CDKL5-208ENST00000624953 NFATC3Q12968 1075 aa4.39□□□□□ -1.71
CDKL5-208ENST00000624953 MOGSQ13724 837 aa4.39□□□□□ -1.71
CDKL5-208ENST00000624953 EIF4HQ15056 248 aaKnown RBP4.39□□□□□ -1.71
CDKL5-208ENST00000624953 PCBP1Q15365 356 aaKnown RBP eCLIP4.39□□□□□ -1.71
CDKL5-208ENST00000624953 SKOR2Q2VWA4 1001 aaPredicted RBP4.39□□□□□ -1.71
CDKL5-208ENST00000624953 PHF19Q5T6S3 580 aa4.39□□□□□ -1.71
CDKL5-208ENST00000624953 KRTAP5-3Q6L8H2 238 aa4.39□□□□□ -1.71
CDKL5-208ENST00000624953 KANSL1Q7Z3B3 1105 aa4.39□□□□□ -1.71
CDKL5-208ENST00000624953 GGNQ86UU5 652 aa4.39□□□□□ -1.71
CDKL5-208ENST00000624953 PPM1KQ8N3J5 372 aa4.39□□□□□ -1.71
CDKL5-208ENST00000624953 SMC1BQ8NDV3 1235 aa4.39□□□□□ -1.71
CDKL5-208ENST00000624953 LCORQ96JN0 433 aaPredicted RBP4.39□□□□□ -1.71
CDKL5-208ENST00000624953 GBP4Q96PP9 640 aa4.39□□□□□ -1.71
CDKL5-208ENST00000624953 PRAM1Q96QH2 718 aa4.39□□□□□ -1.71
CDKL5-208ENST00000624953 SYT17Q9BSW7 474 aa4.39□□□□□ -1.71
CDKL5-208ENST00000624953 KRTAP3-1Q9BYR8 98 aa4.39□□□□□ -1.71
CDKL5-208ENST00000624953 ZMAT4Q9H898 229 aa4.39□□□□□ -1.71
CDKL5-208ENST00000624953 C14orf93Q9H972 538 aaKnown RBP4.39□□□□□ -1.71
CDKL5-208ENST00000624953 ACSS2Q9NR19 701 aa4.39□□□□□ -1.71
CDKL5-208ENST00000624953 TMA7Q9Y2S6 64 aaKnown RBP4.39□□□□□ -1.71
CDKL5-208ENST00000624953 N4BP2Q86UW6 1770 aaPredicted RBP4.39□□□□□ -1.71
CDKL5-208ENST00000624953 SBF1O95248 1867 aa4.39□□□□□ -1.71
CDKL5-208ENST00000624953 DHX57Q6P158 1386 aaKnown RBP4.39□□□□□ -1.71
CDKL5-208ENST00000624953 FAM208AQ9UK61 1670 aaKnown RBP4.38□□□□□ -1.71
CDKL5-208ENST00000624953 OVOS2A0A0G2JMS6 1433 aa4.38□□□□□ -1.71
CDKL5-208ENST00000624953 OVOS2A0A0J9YW53 1432 aa4.38□□□□□ -1.71
CDKL5-208ENST00000624953 OVOS2Q6IE36 1432 aa4.38□□□□□ -1.71
CDKL5-208ENST00000624953 NFAT5O94916 1531 aa4.38□□□□□ -1.71
CDKL5-208ENST00000624953 PRAMEF25A6NGN4 478 aa4.38□□□□□ -1.71
CDKL5-208ENST00000624953 ZNF891A8MT65 544 aaPredicted RBP4.38□□□□□ -1.71
CDKL5-208ENST00000624953 CNOT4O95628 575 aaKnown RBP4.38□□□□□ -1.71
CDKL5-208ENST00000624953 PRLP01236 227 aa4.38□□□□□ -1.71
CDKL5-208ENST00000624953 POU3F3P20264 500 aaPredicted RBP4.38□□□□□ -1.71
CDKL5-208ENST00000624953 POLD1P28340 1107 aa4.38□□□□□ -1.71
CDKL5-208ENST00000624953 FLT3P36888 993 aa4.38□□□□□ -1.71
CDKL5-208ENST00000624953 ECE1P42892 770 aa4.38□□□□□ -1.71
CDKL5-208ENST00000624953 ETV4P43268 484 aa4.38□□□□□ -1.71
CDKL5-208ENST00000624953 GYS2P54840 703 aa4.38□□□□□ -1.71
CDKL5-208ENST00000624953 PHC1P78364 1004 aa4.38□□□□□ -1.71
CDKL5-208ENST00000624953 SMAD3P84022 425 aaKnown RBP4.38□□□□□ -1.71
CDKL5-208ENST00000624953 NFYCQ13952 458 aa4.38□□□□□ -1.71
CDKL5-208ENST00000624953 DHCR24Q15392 516 aa4.38□□□□□ -1.71
CDKL5-208ENST00000624953 CFAP100Q494V2 611 aa4.38□□□□□ -1.71
CDKL5-208ENST00000624953 MCTP2Q6DN12 878 aa4.38□□□□□ -1.71
CDKL5-208ENST00000624953 LRSAM1Q6UWE0 723 aa4.38□□□□□ -1.71
CDKL5-208ENST00000624953 DHX37Q8IY37 1157 aaKnown RBP4.38□□□□□ -1.71
CDKL5-208ENST00000624953 EFHBQ8N7U6 833 aa4.38□□□□□ -1.71
CDKL5-208ENST00000624953 TACO1Q9BSH4 297 aaKnown RBP4.38□□□□□ -1.71
CDKL5-208ENST00000624953 ZDHHC5Q9C0B5 715 aa4.38□□□□□ -1.71
CDKL5-208ENST00000624953 PITHD1Q9GZP4 211 aaPredicted RBP4.38□□□□□ -1.71
CDKL5-208ENST00000624953 MEGF9Q9H1U4 602 aa4.38□□□□□ -1.71
CDKL5-208ENST00000624953 OR10A5Q9H207 317 aa4.38□□□□□ -1.71
CDKL5-208ENST00000624953 ADAM7Q9H2U9 754 aa4.38□□□□□ -1.71
CDKL5-208ENST00000624953 PRDM11Q9NQV5 511 aa4.38□□□□□ -1.71
CDKL5-208ENST00000624953 OXSMQ9NWU1 459 aa4.38□□□□□ -1.71
CDKL5-208ENST00000624953 FBXO10Q9UK96 956 aa4.38□□□□□ -1.71
CDKL5-208ENST00000624953 SLC4A7Q9Y6M7 1214 aa4.38□□□□□ -1.71
CDKL5-208ENST00000624953 USP19O94966 1318 aa4.38□□□□□ -1.71
CDKL5-208ENST00000624953 POLR3AO14802 1390 aaPredicted RBP4.38□□□□□ -1.71
CDKL5-208ENST00000624953 CPDO75976 1380 aa4.38□□□□□ -1.71
CDKL5-208ENST00000624953 BCL9O00512 1426 aa4.38□□□□□ -1.71
CDKL5-208ENST00000624953 CRB1P82279 1406 aa4.38□□□□□ -1.71
CDKL5-208ENST00000624953 MAP2P11137 1827 aaKnown RBP4.37□□□□□ -1.71
CDKL5-208ENST00000624953 ABCC6O95255 1503 aa4.37□□□□□ -1.71
CDKL5-208ENST00000624953 H0Y858 1186 aa4.37□□□□□ -1.71
CDKL5-208ENST00000624953 PLSCR1O15162 318 aa4.37□□□□□ -1.71
CDKL5-208ENST00000624953 PLATP00750 562 aa4.37□□□□□ -1.71
CDKL5-208ENST00000624953 CYP17A1P05093 508 aa4.37□□□□□ -1.71
CDKL5-208ENST00000624953 ITGB3P05106 788 aa4.37□□□□□ -1.71
CDKL5-208ENST00000624953 SYN1P17600 705 aa4.37□□□□□ -1.71
CDKL5-208ENST00000624953 PTX3P26022 381 aaPredicted RBP4.37□□□□□ -1.71
CDKL5-208ENST00000624953 STAT3P40763 770 aa4.37□□□□□ -1.71
CDKL5-208ENST00000624953 LSSP48449 732 aa4.37□□□□□ -1.71
CDKL5-208ENST00000624953 NFKB2Q00653 900 aa4.37□□□□□ -1.71
CDKL5-208ENST00000624953 KIAA2012Q0VF49 1180 aa4.37□□□□□ -1.71
CDKL5-208ENST00000624953 EFEMP1Q12805 493 aa4.37□□□□□ -1.71
CDKL5-208ENST00000624953 DUSP8Q13202 625 aa4.37□□□□□ -1.71
CDKL5-208ENST00000624953 LRRC32Q14392 662 aa4.37□□□□□ -1.71
CDKL5-208ENST00000624953 NFIXQ14938 502 aa4.37□□□□□ -1.71
CDKL5-208ENST00000624953 C21orf62-AS1Q17RA5 79 aa4.37□□□□□ -1.71
CDKL5-208ENST00000624953 TBC1D10BQ4KMP7 808 aaPredicted RBP4.37□□□□□ -1.71
CDKL5-208ENST00000624953 TRMT10BQ6PF06 316 aaKnown RBP4.37□□□□□ -1.71
CDKL5-208ENST00000624953 UBE2R2Q712K3 238 aaPredicted RBP4.37□□□□□ -1.71
CDKL5-208ENST00000624953 AFAP1L2Q8N4X5 818 aa4.37□□□□□ -1.71
CDKL5-208ENST00000624953 KIAA1958Q8N8K9 716 aa4.37□□□□□ -1.71
CDKL5-208ENST00000624953 ELF4Q99607 663 aaPredicted RBP4.37□□□□□ -1.71
CDKL5-208ENST00000624953 TMEM168Q9H0V1 697 aa4.37□□□□□ -1.71
CDKL5-208ENST00000624953 CABP5Q9NP86 173 aa4.37□□□□□ -1.71
CDKL5-208ENST00000624953 CROTQ9UKG9 612 aa4.37□□□□□ -1.71
CDKL5-208ENST00000624953 PKD1L3Q7Z443 1732 aa4.37□□□□□ -1.71
CDKL5-208ENST00000624953 AATKQ6ZMQ8 1374 aa4.37□□□□□ -1.71
CDKL5-208ENST00000624953 MAP3K5Q99683 1374 aa4.37□□□□□ -1.71
CDKL5-208ENST00000624953 PMS2P1A4D2B8 440 aa4.36□□□□□ -1.71
CDKL5-208ENST00000624953 KPNA6O60684 536 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms