RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 SMAD3P84022 425 aaKnown RBP20.46■□□□□ 0.87
CIRBP-245ENST00000621399 FAM187BQ17R55 369 aa20.46■□□□□ 0.87
CIRBP-245ENST00000621399 TMEM132AQ24JP5 1023 aa20.46■□□□□ 0.87
CIRBP-245ENST00000621399 NOTUMQ6P988 496 aa20.46■□□□□ 0.87
CIRBP-245ENST00000621399 FAM178BQ8IXR5 827 aa20.46■□□□□ 0.87
CIRBP-245ENST00000621399 CCDC65Q8IXS2 484 aa20.46■□□□□ 0.87
CIRBP-245ENST00000621399 GRAMD1CQ8IYS0 662 aa20.46■□□□□ 0.87
CIRBP-245ENST00000621399 TMEM161BQ8NDZ6 487 aa20.46■□□□□ 0.87
CIRBP-245ENST00000621399 CNNM3Q8NE01 707 aa20.46■□□□□ 0.87
CIRBP-245ENST00000621399 CPB2Q96IY4 423 aa20.46■□□□□ 0.87
CIRBP-245ENST00000621399 C7orf25Q9BPX7 421 aa20.46■□□□□ 0.87
CIRBP-245ENST00000621399 BLZF1Q9H2G9 400 aa20.46■□□□□ 0.87
CIRBP-245ENST00000621399 TMEM134Q9H6X4 195 aa20.46■□□□□ 0.87
CIRBP-245ENST00000621399 PANK4Q9NVE7 773 aa20.46■□□□□ 0.87
CIRBP-245ENST00000621399 RNF216Q9NWF9 866 aaPredicted RBP20.46■□□□□ 0.87
CIRBP-245ENST00000621399 LRFN2Q9ULH4 789 aa20.46■□□□□ 0.87
CIRBP-245ENST00000621399 PCDHB7Q9Y5E2 793 aa20.46■□□□□ 0.87
CIRBP-245ENST00000621399 K7ENM7 598 aa20.45■□□□□ 0.86
CIRBP-245ENST00000621399 TLL1O43897 1013 aa20.45■□□□□ 0.86
CIRBP-245ENST00000621399 GADD45BO75293 160 aaPredicted RBP20.45■□□□□ 0.86
CIRBP-245ENST00000621399 PRPF40AO75400 957 aaKnown RBP20.45■□□□□ 0.86
CIRBP-245ENST00000621399 GJB5O95377 273 aa20.45■□□□□ 0.86
CIRBP-245ENST00000621399 ARF4P18085 180 aaPredicted RBP20.45■□□□□ 0.86
CIRBP-245ENST00000621399 NCKAP1LP55160 1127 aa20.45■□□□□ 0.86
CIRBP-245ENST00000621399 ASIC1P78348 528 aa20.45■□□□□ 0.86
CIRBP-245ENST00000621399 FAM189BP81408 668 aa20.45■□□□□ 0.86
CIRBP-245ENST00000621399 STRN3Q13033 797 aa20.45■□□□□ 0.86
CIRBP-245ENST00000621399 HERC4Q5GLZ8 1057 aaPredicted RBP20.45■□□□□ 0.86
CIRBP-245ENST00000621399 HAUS6Q7Z4H7 955 aa20.45■□□□□ 0.86
CIRBP-245ENST00000621399 SFR1Q86XK3 245 aa20.45■□□□□ 0.86
CIRBP-245ENST00000621399 NPAS4Q8IUM7 802 aa20.45■□□□□ 0.86
CIRBP-245ENST00000621399 CCDC51Q96ER9 411 aa20.45■□□□□ 0.86
CIRBP-245ENST00000621399 SEL1LQ9UBV2 794 aa20.45■□□□□ 0.86
CIRBP-245ENST00000621399 USP20Q9Y2K6 914 aa20.45■□□□□ 0.86
CIRBP-245ENST00000621399 CNTNAP2Q9UHC6 1331 aa20.45■□□□□ 0.86
CIRBP-245ENST00000621399 A0A0U1RQF3 1178 aa20.44■□□□□ 0.86
CIRBP-245ENST00000621399 MAPTP10636 758 aaKnown RBP20.44■□□□□ 0.86
CIRBP-245ENST00000621399 SKIP12755 728 aa20.44■□□□□ 0.86
CIRBP-245ENST00000621399 CASP1P29466 404 aa20.44■□□□□ 0.86
CIRBP-245ENST00000621399 FAM160A1Q05DH4 1040 aa20.44■□□□□ 0.86
CIRBP-245ENST00000621399 CNNM4Q6P4Q7 775 aa20.44■□□□□ 0.86
CIRBP-245ENST00000621399 KRBA2Q6ZNG9 492 aa20.44■□□□□ 0.86
CIRBP-245ENST00000621399 CLEC17AQ6ZS10 378 aa20.44■□□□□ 0.86
CIRBP-245ENST00000621399 ECHDC2Q86YB7 292 aa20.44■□□□□ 0.86
CIRBP-245ENST00000621399 FMR1NBQ8N0W7 255 aaPredicted RBP20.44■□□□□ 0.86
CIRBP-245ENST00000621399 RNF169Q8NCN4 708 aa20.44■□□□□ 0.86
CIRBP-245ENST00000621399 SLC17A8Q8NDX2 589 aa20.44■□□□□ 0.86
CIRBP-245ENST00000621399 RAD9AQ99638 391 aa20.44■□□□□ 0.86
CIRBP-245ENST00000621399 TRAIPQ9BWF2 469 aa20.44■□□□□ 0.86
CIRBP-245ENST00000621399 PBX4Q9BYU1 374 aa20.44■□□□□ 0.86
CIRBP-245ENST00000621399 MRPL44Q9H9J2 332 aaKnown RBP20.44■□□□□ 0.86
CIRBP-245ENST00000621399 MSRAQ9UJ68 235 aa20.44■□□□□ 0.86
CIRBP-245ENST00000621399 PCDHA11Q9Y5I1 949 aa20.44■□□□□ 0.86
CIRBP-245ENST00000621399 A0A1B0GUA9 196 aa20.43■□□□□ 0.86
CIRBP-245ENST00000621399 FRMD3A2A2Y4 597 aa20.43■□□□□ 0.86
CIRBP-245ENST00000621399 TTLL13PA6NNM8 815 aa20.43■□□□□ 0.86
CIRBP-245ENST00000621399 SCP2P22307 547 aa20.43■□□□□ 0.86
CIRBP-245ENST00000621399 NMT1P30419 496 aaKnown RBP20.43■□□□□ 0.86
CIRBP-245ENST00000621399 PBX2P40425 430 aa20.43■□□□□ 0.86
CIRBP-245ENST00000621399 RAB27AP51159 221 aa20.43■□□□□ 0.86
CIRBP-245ENST00000621399 CUL4BQ13620 913 aa20.43■□□□□ 0.86
CIRBP-245ENST00000621399 RAB30Q15771 203 aa20.43■□□□□ 0.86
CIRBP-245ENST00000621399 UBXN11Q5T124 520 aa20.43■□□□□ 0.86
CIRBP-245ENST00000621399 TAS1R3Q7RTX0 852 aa20.43■□□□□ 0.86
CIRBP-245ENST00000621399 CRIPAKQ8N1N5 446 aa20.43■□□□□ 0.86
CIRBP-245ENST00000621399 ENGASEQ8NFI3 743 aa20.43■□□□□ 0.86
CIRBP-245ENST00000621399 CCDC34Q96HJ3 373 aa20.43■□□□□ 0.86
CIRBP-245ENST00000621399 GBP4Q96PP9 640 aa20.43■□□□□ 0.86
CIRBP-245ENST00000621399 YME1L1Q96TA2 773 aa20.43■□□□□ 0.86
CIRBP-245ENST00000621399 MRPL4Q9BYD3 311 aaKnown RBP20.43■□□□□ 0.86
CIRBP-245ENST00000621399 ELAC1Q9H777 363 aaKnown RBP20.43■□□□□ 0.86
CIRBP-245ENST00000621399 FAM105AQ9NUU6 356 aa20.43■□□□□ 0.86
CIRBP-245ENST00000621399 TMEM161AQ9NX61 479 aa20.43■□□□□ 0.86
CIRBP-245ENST00000621399 TBC1D7Q9P0N9 293 aa20.43■□□□□ 0.86
CIRBP-245ENST00000621399 INSL6Q9Y581 213 aa20.43■□□□□ 0.86
CIRBP-245ENST00000621399 LAMA2P24043 3122 aaKnown RBP20.42■□□□□ 0.86
CIRBP-245ENST00000621399 SOX1O00570 391 aaPredicted RBP20.42■□□□□ 0.86
CIRBP-245ENST00000621399 N4BP3O15049 544 aa20.42■□□□□ 0.86
CIRBP-245ENST00000621399 EDN1P05305 212 aa20.42■□□□□ 0.86
CIRBP-245ENST00000621399 MYOGP15173 224 aa20.42■□□□□ 0.86
CIRBP-245ENST00000621399 ABCD1P33897 745 aa20.42■□□□□ 0.86
CIRBP-245ENST00000621399 UBE2HP62256 183 aa20.42■□□□□ 0.86
CIRBP-245ENST00000621399 SNW1Q13573 536 aaKnown RBP20.42■□□□□ 0.86
CIRBP-245ENST00000621399 NT5DC1Q5TFE4 455 aa20.42■□□□□ 0.86
CIRBP-245ENST00000621399 ATF7IP2Q5U623 682 aa20.42■□□□□ 0.86
CIRBP-245ENST00000621399 KANK3Q6NY19 840 aa20.42■□□□□ 0.86
CIRBP-245ENST00000621399 SLC27A1Q6PCB7 646 aa20.42■□□□□ 0.86
CIRBP-245ENST00000621399 CDR2LQ86X02 465 aaPredicted RBP20.42■□□□□ 0.86
CIRBP-245ENST00000621399 FIZ1Q96SL8 496 aa20.42■□□□□ 0.86
CIRBP-245ENST00000621399 TRIM6Q9C030 488 aaPredicted RBP20.42■□□□□ 0.86
CIRBP-245ENST00000621399 TBX20Q9UMR3 447 aa20.42■□□□□ 0.86
CIRBP-245ENST00000621399 PCDHB2Q9Y5E7 798 aa20.42■□□□□ 0.86
CIRBP-245ENST00000621399 LAMA3Q16787 3333 aa20.42■□□□□ 0.86
CIRBP-245ENST00000621399 MICAL3Q7RTP6 2002 aa20.41■□□□□ 0.86
CIRBP-245ENST00000621399 GTPBP6O43824 516 aaPredicted RBP20.41■□□□□ 0.86
CIRBP-245ENST00000621399 EOMESO95936 686 aa20.41■□□□□ 0.86
CIRBP-245ENST00000621399 MYL1P05976 194 aa20.41■□□□□ 0.86
CIRBP-245ENST00000621399 DNAJB2P25686 324 aa20.41■□□□□ 0.86
CIRBP-245ENST00000621399 HTRA4P83105 476 aaPredicted RBP20.41■□□□□ 0.86
CIRBP-245ENST00000621399 COASYQ13057 564 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms