RNA–Protein interactions for RNA: ENST00000621266.4

COL4A6-210, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,627 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-210ENST00000621266 PRPSAP2O60256 369 aa10.5□□□□□ -0.73
COL4A6-210ENST00000621266 OCM2P0CE71 109 aa10.5□□□□□ -0.73
COL4A6-210ENST00000621266 OCMP0CE72 109 aaPredicted RBP10.5□□□□□ -0.73
COL4A6-210ENST00000621266 FGFR4P22455 802 aa10.5□□□□□ -0.73
COL4A6-210ENST00000621266 CACNB3P54284 484 aa10.5□□□□□ -0.73
COL4A6-210ENST00000621266 IMPG1Q17R60 797 aa10.5□□□□□ -0.73
COL4A6-210ENST00000621266 MTBPQ96DY7 904 aa10.5□□□□□ -0.73
COL4A6-210ENST00000621266 CYFIP2Q96F07 1278 aa10.5□□□□□ -0.73
COL4A6-210ENST00000621266 RPS6KC1Q96S38 1066 aa10.5□□□□□ -0.73
COL4A6-210ENST00000621266 HEG1Q9ULI3 1381 aa10.5□□□□□ -0.73
COL4A6-210ENST00000621266 M0R3G1 203 aa10.5□□□□□ -0.73
COL4A6-210ENST00000621266 SOX11P35716 441 aa10.5□□□□□ -0.73
COL4A6-210ENST00000621266 HSPA9P38646 679 aaKnown RBP10.5□□□□□ -0.73
COL4A6-210ENST00000621266 USP14P54578 494 aa10.5□□□□□ -0.73
COL4A6-210ENST00000621266 ARPP19P56211 112 aa10.5□□□□□ -0.73
COL4A6-210ENST00000621266 MAP3K10Q02779 954 aa10.5□□□□□ -0.73
COL4A6-210ENST00000621266 DAB2IPQ5VWQ8 1189 aa10.5□□□□□ -0.73
COL4A6-210ENST00000621266 LVRNQ6Q4G3 990 aa10.5□□□□□ -0.73
COL4A6-210ENST00000621266 ZBTB33Q86T24 672 aa10.5□□□□□ -0.73
COL4A6-210ENST00000621266 ABI1Q8IZP0 508 aa10.5□□□□□ -0.73
COL4A6-210ENST00000621266 SEC16BQ96JE7 1060 aa10.5□□□□□ -0.73
COL4A6-210ENST00000621266 PRPF18Q99633 342 aaKnown RBP10.5□□□□□ -0.73
COL4A6-210ENST00000621266 ASPSCR1Q9BZE9 553 aa10.5□□□□□ -0.73
COL4A6-210ENST00000621266 FAM96AQ9H5X1 160 aa10.5□□□□□ -0.73
COL4A6-210ENST00000621266 ABHD10Q9NUJ1 306 aa10.5□□□□□ -0.73
COL4A6-210ENST00000621266 AKT3Q9Y243 479 aa10.5□□□□□ -0.73
COL4A6-210ENST00000621266 ARL2BPQ9Y2Y0 163 aa10.5□□□□□ -0.73
COL4A6-210ENST00000621266 LINC00854A0A1B0GVQ3 168 aa10.5□□□□□ -0.73
COL4A6-210ENST00000621266 CCDC22O60826 627 aa10.5□□□□□ -0.73
COL4A6-210ENST00000621266 SKAP2O75563 359 aaPredicted RBP10.5□□□□□ -0.73
COL4A6-210ENST00000621266 CAPN1P07384 714 aa10.5□□□□□ -0.73
COL4A6-210ENST00000621266 CDC25AP30304 524 aa10.5□□□□□ -0.73
COL4A6-210ENST00000621266 ADORA1P30542 326 aa10.5□□□□□ -0.73
COL4A6-210ENST00000621266 MRPS35P82673 323 aaKnown RBP10.5□□□□□ -0.73
COL4A6-210ENST00000621266 CCDC144BQ3MJ40 725 aa10.5□□□□□ -0.73
COL4A6-210ENST00000621266 PPM1NQ8N819 430 aa10.5□□□□□ -0.73
COL4A6-210ENST00000621266 RFWD2Q8NHY2 731 aa10.5□□□□□ -0.73
COL4A6-210ENST00000621266 EME1Q96AY2 570 aa10.5□□□□□ -0.73
COL4A6-210ENST00000621266 MRPS26Q9BYN8 205 aaKnown RBP10.5□□□□□ -0.73
COL4A6-210ENST00000621266 GEMIN8Q9NWZ8 242 aaKnown RBP10.5□□□□□ -0.73
COL4A6-210ENST00000621266 PNMA2Q9UL42 364 aa10.5□□□□□ -0.73
COL4A6-210ENST00000621266 ITM2BQ9Y287 266 aa10.5□□□□□ -0.73
COL4A6-210ENST00000621266 KLRF2D3W0D1 207 aa10.5□□□□□ -0.73
COL4A6-210ENST00000621266 SNUPNO95149 360 aaKnown RBP10.5□□□□□ -0.73
COL4A6-210ENST00000621266 CHN1P15882 459 aa10.5□□□□□ -0.73
COL4A6-210ENST00000621266 POU5F1BQ06416 359 aa10.5□□□□□ -0.73
COL4A6-210ENST00000621266 NR1H3Q13133 447 aa10.5□□□□□ -0.73
COL4A6-210ENST00000621266 TAF1DQ9H5J8 278 aaPredicted RBP10.5□□□□□ -0.73
COL4A6-210ENST00000621266 POLR3EQ9NVU0 708 aa10.5□□□□□ -0.73
COL4A6-210ENST00000621266 ARHGAP31Q2M1Z3 1444 aa10.5□□□□□ -0.73
COL4A6-210ENST00000621266 UBE4BO95155 1302 aa10.5□□□□□ -0.73
COL4A6-210ENST00000621266 GNAT1P11488 350 aa10.5□□□□□ -0.73
COL4A6-210ENST00000621266 VSNL1P62760 191 aa10.5□□□□□ -0.73
COL4A6-210ENST00000621266 DYNLL1P63167 89 aaKnown RBP10.5□□□□□ -0.73
COL4A6-210ENST00000621266 KLHL38Q2WGJ6 581 aa10.5□□□□□ -0.73
COL4A6-210ENST00000621266 ANO4Q32M45 955 aa10.5□□□□□ -0.73
COL4A6-210ENST00000621266 OR6B2Q6IFH4 312 aa10.5□□□□□ -0.73
COL4A6-210ENST00000621266 GALNT17Q6IS24 598 aa10.5□□□□□ -0.73
COL4A6-210ENST00000621266 PATL1Q86TB9 770 aaKnown RBP10.5□□□□□ -0.73
COL4A6-210ENST00000621266 ARL10Q8N8L6 244 aa10.5□□□□□ -0.73
COL4A6-210ENST00000621266 ARHGEF1Q92888 912 aaKnown RBP10.5□□□□□ -0.73
COL4A6-210ENST00000621266 TMA16Q96EY4 203 aaKnown RBP10.5□□□□□ -0.73
COL4A6-210ENST00000621266 TEKT3Q9BXF9 490 aa10.5□□□□□ -0.73
COL4A6-210ENST00000621266 DDX47Q9H0S4 455 aaKnown RBP10.5□□□□□ -0.73
COL4A6-210ENST00000621266 ZSCAN32Q9NX65 697 aa10.5□□□□□ -0.73
COL4A6-210ENST00000621266 PPP1R37O75864 691 aa10.49□□□□□ -0.73
COL4A6-210ENST00000621266 BBOX1O75936 387 aa10.49□□□□□ -0.73
COL4A6-210ENST00000621266 POLR2MP0CAP2 368 aa10.49□□□□□ -0.73
COL4A6-210ENST00000621266 SUSD4Q5VX71 490 aa10.49□□□□□ -0.73
COL4A6-210ENST00000621266 ALKBH5Q6P6C2 394 aaKnown RBP10.49□□□□□ -0.73
COL4A6-210ENST00000621266 DEFB132Q7Z7B7 95 aa10.49□□□□□ -0.73
COL4A6-210ENST00000621266 PBXIP1Q96AQ6 731 aa10.49□□□□□ -0.73
COL4A6-210ENST00000621266 BBS2Q9BXC9 721 aa10.49□□□□□ -0.73
COL4A6-210ENST00000621266 MRPL11Q9Y3B7 192 aaKnown RBP10.49□□□□□ -0.73
COL4A6-210ENST00000621266 HNRNPDLO14979 420 aaKnown RBP10.49□□□□□ -0.73
COL4A6-210ENST00000621266 KRT38O76015 456 aa10.49□□□□□ -0.73
COL4A6-210ENST00000621266 CD58P19256 250 aa10.49□□□□□ -0.73
COL4A6-210ENST00000621266 IFNA8P32881 189 aa10.49□□□□□ -0.73
COL4A6-210ENST00000621266 POLGP54098 1239 aaPredicted RBP10.49□□□□□ -0.73
COL4A6-210ENST00000621266 ZMYM1Q5SVZ6 1142 aa10.49□□□□□ -0.73
COL4A6-210ENST00000621266 CC2D2BQ6DHV5 1058 aa10.49□□□□□ -0.73
COL4A6-210ENST00000621266 KRT26Q7Z3Y9 468 aa10.49□□□□□ -0.73
COL4A6-210ENST00000621266 HACE1Q8IYU2 909 aa10.49□□□□□ -0.73
COL4A6-210ENST00000621266 COG1Q8WTW3 980 aa10.49□□□□□ -0.73
COL4A6-210ENST00000621266 FAM81BQ96LP2 452 aa10.49□□□□□ -0.73
COL4A6-210ENST00000621266 NOC2LQ9Y3T9 749 aaKnown RBP10.49□□□□□ -0.73
COL4A6-210ENST00000621266 SNX2O60749 519 aa10.49□□□□□ -0.73
COL4A6-210ENST00000621266 TJP3O95049 919 aa10.49□□□□□ -0.73
COL4A6-210ENST00000621266 CLEC4FQ8N1N0 589 aa10.49□□□□□ -0.73
COL4A6-210ENST00000621266 STX19Q8N4C7 294 aa10.49□□□□□ -0.73
COL4A6-210ENST00000621266 PAGE5Q96GU1 130 aa10.49□□□□□ -0.73
COL4A6-210ENST00000621266 ADAM33Q9BZ11 813 aa10.49□□□□□ -0.73
COL4A6-210ENST00000621266 NDST4Q9H3R1 872 aa10.49□□□□□ -0.73
COL4A6-210ENST00000621266 TSR3Q9UJK0 312 aaKnown RBP10.49□□□□□ -0.73
COL4A6-210ENST00000621266 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.49□□□□□ -0.73
COL4A6-210ENST00000621266 GOLGA8IPA6NC78 632 aa10.49□□□□□ -0.73
COL4A6-210ENST00000621266 MEIS1O00470 390 aa10.49□□□□□ -0.73
COL4A6-210ENST00000621266 TBC1D4O60343 1298 aa10.49□□□□□ -0.73
COL4A6-210ENST00000621266 MYBL1P10243 752 aa10.49□□□□□ -0.73
COL4A6-210ENST00000621266 ST13P50502 369 aaKnown RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms