RNA–Protein interactions for RNA: ENST00000620916.2

MATR3-228, Transcript of matrin 3, humanhuman

TSL 5 BASIC

Gene MATR3, Length 3,134 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-228ENST00000620916 RUFY3Q7L099 469 aa5.48□□□□□ -1.53
MATR3-228ENST00000620916 CACNA2D4Q7Z3S7 1137 aa5.48□□□□□ -1.53
MATR3-228ENST00000620916 DDX42Q86XP3 938 aaKnown RBP eCLIP5.48□□□□□ -1.53
MATR3-228ENST00000620916 CCDC63Q8NA47 563 aa5.48□□□□□ -1.53
MATR3-228ENST00000620916 PANK1Q8TE04 598 aa5.48□□□□□ -1.53
MATR3-228ENST00000620916 TMA16Q96EY4 203 aaKnown RBP5.48□□□□□ -1.53
MATR3-228ENST00000620916 OLFM3Q96PB7 478 aa5.48□□□□□ -1.53
MATR3-228ENST00000620916 KCNK17Q96T54 332 aa5.48□□□□□ -1.53
MATR3-228ENST00000620916 LPIN3Q9BQK8 851 aa5.48□□□□□ -1.53
MATR3-228ENST00000620916 ERP44Q9BS26 406 aa5.48□□□□□ -1.53
MATR3-228ENST00000620916 UNKQ9C0B0 810 aaKnown RBP5.48□□□□□ -1.53
MATR3-228ENST00000620916 SRCIN1Q9C0H9 1055 aa5.48□□□□□ -1.53
MATR3-228ENST00000620916 TRPV6Q9H1D0 765 aa5.48□□□□□ -1.53
MATR3-228ENST00000620916 BABAM1Q9NWV8 329 aa5.48□□□□□ -1.53
MATR3-228ENST00000620916 ZNHIT2Q9UHR6 403 aa5.48□□□□□ -1.53
MATR3-228ENST00000620916 PRR12Q9ULL5 1215 aa5.48□□□□□ -1.53
MATR3-228ENST00000620916 NOVA2Q9UNW9 492 aaKnown RBP5.48□□□□□ -1.53
MATR3-228ENST00000620916 RGPD2P0DJD1 1756 aa5.48□□□□□ -1.53
MATR3-228ENST00000620916 RGS20O76081 388 aa5.48□□□□□ -1.53
MATR3-228ENST00000620916 SSBP05455 408 aaKnown RBP eCLIP5.48□□□□□ -1.53
MATR3-228ENST00000620916 CDK4P11802 303 aa5.48□□□□□ -1.53
MATR3-228ENST00000620916 CBX5P45973 191 aa5.48□□□□□ -1.53
MATR3-228ENST00000620916 HAAOP46952 286 aa5.48□□□□□ -1.53
MATR3-228ENST00000620916 VEGFBP49765 207 aa5.48□□□□□ -1.53
MATR3-228ENST00000620916 PSEN2P49810 448 aa5.48□□□□□ -1.53
MATR3-228ENST00000620916 LBX1P52954 281 aa5.48□□□□□ -1.53
MATR3-228ENST00000620916 PPP1R7Q15435 360 aa5.48□□□□□ -1.53
MATR3-228ENST00000620916 RNF220Q5VTB9 566 aa5.48□□□□□ -1.53
MATR3-228ENST00000620916 METTL11BQ5VVY1 283 aa5.48□□□□□ -1.53
MATR3-228ENST00000620916 TSHZ3Q63HK5 1081 aa5.48□□□□□ -1.53
MATR3-228ENST00000620916 EGFLAMQ63HQ2 1017 aa5.48□□□□□ -1.53
MATR3-228ENST00000620916 KCTD16Q68DU8 428 aa5.48□□□□□ -1.53
MATR3-228ENST00000620916 LLGL2Q6P1M3 1020 aa5.48□□□□□ -1.53
MATR3-228ENST00000620916 ARMCX5Q6P1M9 558 aa5.48□□□□□ -1.53
MATR3-228ENST00000620916 PDXDC2PQ6P474 469 aa5.48□□□□□ -1.53
MATR3-228ENST00000620916 DPH6Q7L8W6 267 aa5.48□□□□□ -1.53
MATR3-228ENST00000620916 INTS12Q96CB8 462 aaKnown RBP5.48□□□□□ -1.53
MATR3-228ENST00000620916 GLT8D2Q9H1C3 349 aa5.48□□□□□ -1.53
MATR3-228ENST00000620916 CCDC177Q9NQR7 707 aaPredicted RBP5.48□□□□□ -1.53
MATR3-228ENST00000620916 ARMC1Q9NVT9 282 aa5.48□□□□□ -1.53
MATR3-228ENST00000620916 THAP1Q9NVV9 213 aa5.48□□□□□ -1.53
MATR3-228ENST00000620916 PPP1R14DQ9NXH3 145 aa5.48□□□□□ -1.53
MATR3-228ENST00000620916 BTBD7Q9P203 1132 aa5.48□□□□□ -1.53
MATR3-228ENST00000620916 HMGXB4Q9UGU5 601 aa5.48□□□□□ -1.53
MATR3-228ENST00000620916 AGO2Q9UKV8 859 aaKnown RBP5.48□□□□□ -1.53
MATR3-228ENST00000620916 CEP350Q5VT06 3117 aa5.48□□□□□ -1.53
MATR3-228ENST00000620916 TCHHQ07283 1943 aa5.48□□□□□ -1.53
MATR3-228ENST00000620916 MAGEA13PA6NCF6 341 aa5.48□□□□□ -1.53
MATR3-228ENST00000620916 USP17L3A6NCW0 530 aa5.48□□□□□ -1.53
MATR3-228ENST00000620916 USP17L4A6NCW7 530 aa5.48□□□□□ -1.53
MATR3-228ENST00000620916 GNAT3A8MTJ3 354 aa5.48□□□□□ -1.53
MATR3-228ENST00000620916 E9PBE3 544 aa5.48□□□□□ -1.53
MATR3-228ENST00000620916 GOLGA8MH3BSY2 632 aa5.48□□□□□ -1.53
MATR3-228ENST00000620916 CASQ2O14958 399 aaPredicted RBP5.48□□□□□ -1.53
MATR3-228ENST00000620916 SULT1B1O43704 296 aa5.48□□□□□ -1.53
MATR3-228ENST00000620916 FARP2O94887 1054 aaPredicted RBP5.48□□□□□ -1.53
MATR3-228ENST00000620916 ZBED1O96006 694 aa5.48□□□□□ -1.53
MATR3-228ENST00000620916 LMNAP02545 664 aaKnown RBP5.48□□□□□ -1.53
MATR3-228ENST00000620916 PYGMP11217 842 aa5.48□□□□□ -1.53
MATR3-228ENST00000620916 CFL1P23528 166 aaKnown RBP5.48□□□□□ -1.53
MATR3-228ENST00000620916 CHKAP35790 457 aa5.48□□□□□ -1.53
MATR3-228ENST00000620916 EMP3P54852 163 aa5.48□□□□□ -1.53
MATR3-228ENST00000620916 RELAQ04206 551 aa5.48□□□□□ -1.53
MATR3-228ENST00000620916 CYLC2Q14093 348 aaPredicted RBP5.48□□□□□ -1.53
MATR3-228ENST00000620916 SIM2Q14190 667 aaPredicted RBP5.48□□□□□ -1.53
MATR3-228ENST00000620916 SF3B3Q15393 1217 aaKnown RBP5.48□□□□□ -1.53
MATR3-228ENST00000620916 PCSK7Q16549 785 aa5.48□□□□□ -1.53
MATR3-228ENST00000620916 GLE1Q53GS7 698 aaKnown RBP5.48□□□□□ -1.53
MATR3-228ENST00000620916 ARMC4Q5T2S8 1044 aa5.48□□□□□ -1.53
MATR3-228ENST00000620916 FAM171BQ6P995 826 aa5.48□□□□□ -1.53
MATR3-228ENST00000620916 USP17L2Q6R6M4 530 aa5.48□□□□□ -1.53
MATR3-228ENST00000620916 CAPN12Q6ZSI9 719 aa5.48□□□□□ -1.53
MATR3-228ENST00000620916 RASGRP2Q7LDG7 609 aa5.48□□□□□ -1.53
MATR3-228ENST00000620916 USP17L1Q7RTZ2 530 aa5.48□□□□□ -1.53
MATR3-228ENST00000620916 PPP1R42Q7Z4L9 355 aa5.48□□□□□ -1.53
MATR3-228ENST00000620916 AMIGO3Q86WK7 504 aa5.48□□□□□ -1.53
MATR3-228ENST00000620916 HACE1Q8IYU2 909 aa5.48□□□□□ -1.53
MATR3-228ENST00000620916 BBS5Q8N3I7 341 aa5.48□□□□□ -1.53
MATR3-228ENST00000620916 PAF1Q8N7H5 531 aa5.48□□□□□ -1.53
MATR3-228ENST00000620916 MLKLQ8NB16 471 aa5.48□□□□□ -1.53
MATR3-228ENST00000620916 SCG3Q8WXD2 468 aaKnown RBP5.48□□□□□ -1.53
MATR3-228ENST00000620916 CYFIP2Q96F07 1278 aa5.48□□□□□ -1.53
MATR3-228ENST00000620916 CIB1Q99828 191 aa5.48□□□□□ -1.53
MATR3-228ENST00000620916 SPZ1Q9BXG8 430 aa5.48□□□□□ -1.53
MATR3-228ENST00000620916 NIFKQ9BYG3 293 aaKnown RBP5.48□□□□□ -1.53
MATR3-228ENST00000620916 EHD4Q9H223 541 aa5.48□□□□□ -1.53
MATR3-228ENST00000620916 SIRT5Q9NXA8 310 aa5.48□□□□□ -1.53
MATR3-228ENST00000620916 ARHGEF38Q9NXL2 777 aa5.48□□□□□ -1.53
MATR3-228ENST00000620916 DDX56Q9NY93 547 aaKnown RBP5.48□□□□□ -1.53
MATR3-228ENST00000620916 PTTG2Q9NZH5 202 aa5.48□□□□□ -1.53
MATR3-228ENST00000620916 MAP10Q9P2G4 905 aa5.48□□□□□ -1.53
MATR3-228ENST00000620916 RASAL2Q9UJF2 1139 aa5.48□□□□□ -1.53
MATR3-228ENST00000620916 COL15A1P39059 1388 aa5.47□□□□□ -1.53
MATR3-228ENST00000620916 ANKRD34BA5PLL1 514 aa5.47□□□□□ -1.53
MATR3-228ENST00000620916 NOTOA8MTQ0 251 aa5.47□□□□□ -1.53
MATR3-228ENST00000620916 FADS2P1A8MWK0 482 aa5.47□□□□□ -1.53
MATR3-228ENST00000620916 HNRNPCL2B2RXH8 293 aa5.47□□□□□ -1.53
MATR3-228ENST00000620916 POLRMTO00411 1230 aaKnown RBP5.47□□□□□ -1.53
MATR3-228ENST00000620916 ARHGAP6O43182 974 aa5.47□□□□□ -1.53
MATR3-228ENST00000620916 HNRNPCL1O60812 293 aaKnown RBP5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms