RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 SLC44A4Q53GD3 710 aa5.2□□□□□ -1.58
SNCA-213ENST00000618500 GLB1LQ6UWU2 654 aa5.2□□□□□ -1.58
SNCA-213ENST00000618500 LONP2Q86WA8 852 aa5.2□□□□□ -1.58
SNCA-213ENST00000618500 SYNPOQ8N3V7 929 aa5.2□□□□□ -1.58
SNCA-213ENST00000618500 C12orf76Q8N812 135 aaPredicted RBP5.2□□□□□ -1.58
SNCA-213ENST00000618500 CEP89Q96ST8 783 aa5.2□□□□□ -1.58
SNCA-213ENST00000618500 RYDENQ9NUL5 291 aaKnown RBP5.2□□□□□ -1.58
SNCA-213ENST00000618500 MARCH5Q9NX47 278 aa5.2□□□□□ -1.58
SNCA-213ENST00000618500 CACNA2D2Q9NY47 1150 aa5.2□□□□□ -1.58
SNCA-213ENST00000618500 GDE1Q9NZC3 331 aa5.2□□□□□ -1.58
SNCA-213ENST00000618500 CDH22Q9UJ99 828 aa5.2□□□□□ -1.58
SNCA-213ENST00000618500 PCDHA6Q9UN73 950 aa5.2□□□□□ -1.58
SNCA-213ENST00000618500 NEUROG3Q9Y4Z2 214 aa5.2□□□□□ -1.58
SNCA-213ENST00000618500 PCDHA8Q9Y5H6 950 aa5.2□□□□□ -1.58
SNCA-213ENST00000618500 VWA8A3KMH1 1905 aa5.2□□□□□ -1.58
SNCA-213ENST00000618500 MYO10Q9HD67 2058 aa5.2□□□□□ -1.58
SNCA-213ENST00000618500 CCDC195A0A1B0GUA6 201 aa5.19□□□□□ -1.58
SNCA-213ENST00000618500 ESYT2A0FGR8 921 aa5.19□□□□□ -1.58
SNCA-213ENST00000618500 SORBS3O60504 671 aa5.19□□□□□ -1.58
SNCA-213ENST00000618500 DCNP07585 359 aaKnown RBP5.19□□□□□ -1.58
SNCA-213ENST00000618500 PSAPP07602 524 aa5.19□□□□□ -1.58
SNCA-213ENST00000618500 ZNF806P0C7X5 589 aa5.19□□□□□ -1.58
SNCA-213ENST00000618500 FSHRP23945 695 aa5.19□□□□□ -1.58
SNCA-213ENST00000618500 KLRC2P26717 231 aa5.19□□□□□ -1.58
SNCA-213ENST00000618500 LRRC32Q14392 662 aa5.19□□□□□ -1.58
SNCA-213ENST00000618500 CEP55Q53EZ4 464 aa5.19□□□□□ -1.58
SNCA-213ENST00000618500 N4BP2L1Q5TBK1 243 aaPredicted RBP5.19□□□□□ -1.58
SNCA-213ENST00000618500 PDXDC2PQ6P474 469 aa5.19□□□□□ -1.58
SNCA-213ENST00000618500 TMC5Q6UXY8 1006 aa5.19□□□□□ -1.58
SNCA-213ENST00000618500 ZNF852Q6ZMS4 543 aa5.19□□□□□ -1.58
SNCA-213ENST00000618500 CATIPQ7Z7H3 387 aa5.19□□□□□ -1.58
SNCA-213ENST00000618500 FAM177A1Q8N128 213 aaPredicted RBP5.19□□□□□ -1.58
SNCA-213ENST00000618500 GATA6Q92908 595 aa5.19□□□□□ -1.58
SNCA-213ENST00000618500 OSMRQ99650 979 aa5.19□□□□□ -1.58
SNCA-213ENST00000618500 JPH2Q9BR39 696 aaPredicted RBP5.19□□□□□ -1.58
SNCA-213ENST00000618500 APOL5Q9BWW9 433 aa5.19□□□□□ -1.58
SNCA-213ENST00000618500 GCOM2Q9BZD3 368 aaPredicted RBP5.19□□□□□ -1.58
SNCA-213ENST00000618500 PSTPIP2Q9H939 334 aa5.19□□□□□ -1.58
SNCA-213ENST00000618500 SEMA4GQ9NTN9 838 aa5.19□□□□□ -1.58
SNCA-213ENST00000618500 RTEL1Q9NZ71 1219 aa5.19□□□□□ -1.58
SNCA-213ENST00000618500 SEC63Q9UGP8 760 aaKnown RBP5.19□□□□□ -1.58
SNCA-213ENST00000618500 USP18Q9UMW8 372 aa5.19□□□□□ -1.58
SNCA-213ENST00000618500 EML5Q05BV3 1969 aa5.19□□□□□ -1.58
SNCA-213ENST00000618500 ANK1P16157 1881 aa5.19□□□□□ -1.58
SNCA-213ENST00000618500 MYO16Q9Y6X6 1858 aa5.19□□□□□ -1.58
SNCA-213ENST00000618500 IGLV3-22A0A075B6J6 115 aa5.19□□□□□ -1.58
SNCA-213ENST00000618500 SPDYE3A6NKU9 549 aa5.19□□□□□ -1.58
SNCA-213ENST00000618500 GAS2O43903 313 aaKnown RBP5.19□□□□□ -1.58
SNCA-213ENST00000618500 CCNE2O96020 404 aa5.19□□□□□ -1.58
SNCA-213ENST00000618500 CIITAP33076 1130 aa5.19□□□□□ -1.58
SNCA-213ENST00000618500 RAP1GAPP47736 663 aa5.19□□□□□ -1.58
SNCA-213ENST00000618500 METAP2P50579 478 aaKnown RBP eCLIP5.19□□□□□ -1.58
SNCA-213ENST00000618500 IGBP1P78318 339 aa5.19□□□□□ -1.58
SNCA-213ENST00000618500 POU5F1BQ06416 359 aa5.19□□□□□ -1.58
SNCA-213ENST00000618500 NFX1Q12986 1120 aaKnown RBP5.19□□□□□ -1.58
SNCA-213ENST00000618500 PTGDRQ13258 359 aa5.19□□□□□ -1.58
SNCA-213ENST00000618500 SART3Q15020 963 aaKnown RBP5.19□□□□□ -1.58
SNCA-213ENST00000618500 TMEM266Q2M3C6 531 aa5.19□□□□□ -1.58
SNCA-213ENST00000618500 TSHZ3Q63HK5 1081 aa5.19□□□□□ -1.58
SNCA-213ENST00000618500 UNQ6494/PRO21346Q6UXR6 183 aa5.19□□□□□ -1.58
SNCA-213ENST00000618500 CYB5R4Q7L1T6 521 aa5.19□□□□□ -1.58
SNCA-213ENST00000618500 COLGALT2Q8IYK4 626 aa5.19□□□□□ -1.58
SNCA-213ENST00000618500 TMTC2Q8N394 836 aa5.19□□□□□ -1.58
SNCA-213ENST00000618500 SMG7Q92540 1137 aaKnown RBP5.19□□□□□ -1.58
SNCA-213ENST00000618500 PHKBQ93100 1093 aa5.19□□□□□ -1.58
SNCA-213ENST00000618500 E2F7Q96AV8 911 aa5.19□□□□□ -1.58
SNCA-213ENST00000618500 CHAMP1Q96JM3 812 aa5.19□□□□□ -1.58
SNCA-213ENST00000618500 ZC3H10Q96K80 434 aaKnown RBP5.19□□□□□ -1.58
SNCA-213ENST00000618500 ZKSCAN3Q9BRR0 538 aa5.19□□□□□ -1.58
SNCA-213ENST00000618500 LSM14BQ9BX40 385 aaKnown RBP5.19□□□□□ -1.58
SNCA-213ENST00000618500 AGPAT5Q9NUQ2 364 aa5.19□□□□□ -1.58
SNCA-213ENST00000618500 ZNF862O60290 1169 aa5.18□□□□□ -1.58
SNCA-213ENST00000618500 PPFIA3O75145 1194 aa5.18□□□□□ -1.58
SNCA-213ENST00000618500 CSRP1P21291 193 aaKnown RBP5.18□□□□□ -1.58
SNCA-213ENST00000618500 SFNP31947 248 aa5.18□□□□□ -1.58
SNCA-213ENST00000618500 GBP2P32456 591 aaPredicted RBP5.18□□□□□ -1.58
SNCA-213ENST00000618500 HAND2P61296 217 aa5.18□□□□□ -1.58
SNCA-213ENST00000618500 SPIRE1Q08AE8 756 aa5.18□□□□□ -1.58
SNCA-213ENST00000618500 LRSAM1Q6UWE0 723 aa5.18□□□□□ -1.58
SNCA-213ENST00000618500 SRGAP1Q7Z6B7 1085 aa5.18□□□□□ -1.58
SNCA-213ENST00000618500 TMEM173Q86WV6 379 aaPredicted RBP5.18□□□□□ -1.58
SNCA-213ENST00000618500 CCDC60Q8IWA6 550 aaPredicted RBP5.18□□□□□ -1.58
SNCA-213ENST00000618500 TRAPPC12Q8WVT3 735 aa5.18□□□□□ -1.58
SNCA-213ENST00000618500 MYL10Q9BUA6 226 aa5.18□□□□□ -1.58
SNCA-213ENST00000618500 VAT1LQ9HCJ6 419 aa5.18□□□□□ -1.58
SNCA-213ENST00000618500 FAM217BQ9NTX9 383 aaPredicted RBP5.18□□□□□ -1.58
SNCA-213ENST00000618500 FAM105AQ9NUU6 356 aa5.18□□□□□ -1.58
SNCA-213ENST00000618500 ADAMTS20P59510 1910 aa5.18□□□□□ -1.58
SNCA-213ENST00000618500 TMEM189-UBE2V1I3L0A0 370 aa5.18□□□□□ -1.58
SNCA-213ENST00000618500 TEX28O15482 410 aa5.18□□□□□ -1.58
SNCA-213ENST00000618500 OATP04181 439 aa5.18□□□□□ -1.58
SNCA-213ENST00000618500 TARSP26639 723 aaKnown RBP5.18□□□□□ -1.58
SNCA-213ENST00000618500 JAK3P52333 1124 aa5.18□□□□□ -1.58
SNCA-213ENST00000618500 C11orf74Q86VG3 221 aa5.18□□□□□ -1.58
SNCA-213ENST00000618500 SPEM1Q8N4L4 309 aa5.18□□□□□ -1.58
SNCA-213ENST00000618500 IGDCC4Q8TDY8 1250 aa5.18□□□□□ -1.58
SNCA-213ENST00000618500 DEPDC1BQ8WUY9 529 aa5.18□□□□□ -1.58
SNCA-213ENST00000618500 FOXQ1Q9C009 403 aa5.18□□□□□ -1.58
SNCA-213ENST00000618500 DCHS1Q96JQ0 3298 aa5.18□□□□□ -1.58
SNCA-213ENST00000618500 ARHGEF37A1IGU5 675 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms