RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 KCTD10Q9H3F6 313 aa8.85□□□□□ -0.99
PCDH9-205ENST00000614931 KMT5AQ9NQR1 393 aa8.85□□□□□ -0.99
PCDH9-205ENST00000614931 LARSQ9P2J5 1176 aaKnown RBP8.85□□□□□ -0.99
PCDH9-205ENST00000614931 SUCLA2Q9P2R7 463 aaPredicted RBP8.85□□□□□ -0.99
PCDH9-205ENST00000614931 NOD1Q9Y239 953 aa8.85□□□□□ -0.99
PCDH9-205ENST00000614931 LRRIQ4A6NIV6 560 aa8.84□□□□□ -0.99
PCDH9-205ENST00000614931 TTLL13PA6NNM8 815 aa8.84□□□□□ -0.99
PCDH9-205ENST00000614931 CCDC169A6NNP5 214 aa8.84□□□□□ -0.99
PCDH9-205ENST00000614931 TISP43B9A030 160 aa8.84□□□□□ -0.99
PCDH9-205ENST00000614931 AP5Z1O43299 807 aa8.84□□□□□ -0.99
PCDH9-205ENST00000614931 CCNE1P24864 410 aa8.84□□□□□ -0.99
PCDH9-205ENST00000614931 NAMPTP43490 491 aa8.84□□□□□ -0.99
PCDH9-205ENST00000614931 GTF2BQ00403 316 aa8.84□□□□□ -0.99
PCDH9-205ENST00000614931 PTK7Q13308 1070 aa8.84□□□□□ -0.99
PCDH9-205ENST00000614931 DMP1Q13316 513 aaPredicted RBP8.84□□□□□ -0.99
PCDH9-205ENST00000614931 PDCD11Q14690 1871 aaKnown RBP8.84□□□□□ -0.99
PCDH9-205ENST00000614931 GPNMBQ14956 572 aa8.84□□□□□ -0.99
PCDH9-205ENST00000614931 TRIM71Q2Q1W2 868 aaKnown RBP8.84□□□□□ -0.99
PCDH9-205ENST00000614931 L1TD1Q5T7N2 865 aaKnown RBP8.84□□□□□ -0.99
PCDH9-205ENST00000614931 CDCA2Q69YH5 1023 aaPredicted RBP8.84□□□□□ -0.99
PCDH9-205ENST00000614931 ANKRD40Q6AI12 368 aa8.84□□□□□ -0.99
PCDH9-205ENST00000614931 CENPPQ6IPU0 288 aa8.84□□□□□ -0.99
PCDH9-205ENST00000614931 DEFB128Q7Z7B8 93 aa8.84□□□□□ -0.99
PCDH9-205ENST00000614931 RHPN2Q8IUC4 686 aa8.84□□□□□ -0.99
PCDH9-205ENST00000614931 CCDC155Q8N6L0 562 aa8.84□□□□□ -0.99
PCDH9-205ENST00000614931 SLC17A8Q8NDX2 589 aa8.84□□□□□ -0.99
PCDH9-205ENST00000614931 CAGE1Q8TC20 777 aa8.84□□□□□ -0.99
PCDH9-205ENST00000614931 TCP11Q8WWU5 503 aa8.84□□□□□ -0.99
PCDH9-205ENST00000614931 PSPC1Q8WXF1 523 aaKnown RBP8.84□□□□□ -0.99
PCDH9-205ENST00000614931 P2RX5Q93086 422 aa8.84□□□□□ -0.99
PCDH9-205ENST00000614931 TIFAQ96CG3 184 aa8.84□□□□□ -0.99
PCDH9-205ENST00000614931 JPH2Q9BR39 696 aaPredicted RBP8.84□□□□□ -0.99
PCDH9-205ENST00000614931 CCDC113Q9H0I3 377 aa8.84□□□□□ -0.99
PCDH9-205ENST00000614931 FAM49AQ9H0Q0 323 aaPredicted RBP8.84□□□□□ -0.99
PCDH9-205ENST00000614931 ST6GALNAC4Q9H4F1 302 aa8.84□□□□□ -0.99
PCDH9-205ENST00000614931 ZNF576Q9H609 170 aa8.84□□□□□ -0.99
PCDH9-205ENST00000614931 MINDY3Q9H8M7 445 aa8.84□□□□□ -0.99
PCDH9-205ENST00000614931 CDHR5Q9HBB8 845 aa8.84□□□□□ -0.99
PCDH9-205ENST00000614931 USP20Q9Y2K6 914 aa8.84□□□□□ -0.99
PCDH9-205ENST00000614931 SLC4A7Q9Y6M7 1214 aa8.84□□□□□ -0.99
PCDH9-205ENST00000614931 COL6A3P12111 3177 aa8.83□□□□□ -1
PCDH9-205ENST00000614931 CITO14578 2027 aa8.83□□□□□ -1
PCDH9-205ENST00000614931 UBE4BO95155 1302 aa8.83□□□□□ -1
PCDH9-205ENST00000614931 RALGAPA2Q2PPJ7 1873 aa8.83□□□□□ -1
PCDH9-205ENST00000614931 GBF1Q92538 1859 aa8.83□□□□□ -1
PCDH9-205ENST00000614931 TET1Q8NFU7 2136 aa8.83□□□□□ -1
PCDH9-205ENST00000614931 A0A087WZ62 844 aa8.83□□□□□ -1
PCDH9-205ENST00000614931 SMIM35A0A1B0GVV1 85 aa8.83□□□□□ -1
PCDH9-205ENST00000614931 DENND3A2RUS2 1198 aa8.83□□□□□ -1
PCDH9-205ENST00000614931 ANKRD63C9JTQ0 380 aa8.83□□□□□ -1
PCDH9-205ENST00000614931 TGFB1I1O43294 461 aa8.83□□□□□ -1
PCDH9-205ENST00000614931 CSDE1O75534 798 aaKnown RBP8.83□□□□□ -1
PCDH9-205ENST00000614931 PARNO95453 639 aaKnown RBP8.83□□□□□ -1
PCDH9-205ENST00000614931 SRGAP2CP0DJJ0 459 aa8.83□□□□□ -1
PCDH9-205ENST00000614931 CKBP12277 381 aa8.83□□□□□ -1
PCDH9-205ENST00000614931 ACTN1P12814 892 aa8.83□□□□□ -1
PCDH9-205ENST00000614931 SELPP16109 830 aa8.83□□□□□ -1
PCDH9-205ENST00000614931 ERCC5P28715 1186 aaPredicted RBP8.83□□□□□ -1
PCDH9-205ENST00000614931 GPC3P51654 580 aa8.83□□□□□ -1
PCDH9-205ENST00000614931 PTENP60484 403 aa8.83□□□□□ -1
PCDH9-205ENST00000614931 MYL5Q02045 173 aa8.83□□□□□ -1
PCDH9-205ENST00000614931 TMEM62Q0P6H9 643 aa8.83□□□□□ -1
PCDH9-205ENST00000614931 GSE1Q14687 1217 aa8.83□□□□□ -1
PCDH9-205ENST00000614931 GRIN2CQ14957 1233 aa8.83□□□□□ -1
PCDH9-205ENST00000614931 RAB30Q15771 203 aa8.83□□□□□ -1
PCDH9-205ENST00000614931 SLC39A4Q6P5W5 647 aa8.83□□□□□ -1
PCDH9-205ENST00000614931 TRAF7Q6Q0C0 670 aa8.83□□□□□ -1
PCDH9-205ENST00000614931 LRRC55Q6ZSA7 311 aa8.83□□□□□ -1
PCDH9-205ENST00000614931 LRRC8DQ7L1W4 858 aa8.83□□□□□ -1
PCDH9-205ENST00000614931 SERINC5Q86VE9 423 aa8.83□□□□□ -1
PCDH9-205ENST00000614931 MAP4K3Q8IVH8 894 aa8.83□□□□□ -1
PCDH9-205ENST00000614931 ZC3H3Q8IXZ2 948 aaKnown RBP8.83□□□□□ -1
PCDH9-205ENST00000614931 RNF149Q8NC42 400 aa8.83□□□□□ -1
PCDH9-205ENST00000614931 ZSWIM2Q8NEG5 633 aa8.83□□□□□ -1
PCDH9-205ENST00000614931 ENOX1Q8TC92 643 aaKnown RBP8.83□□□□□ -1
PCDH9-205ENST00000614931 DNAJB3Q8WWF6 145 aa8.83□□□□□ -1
PCDH9-205ENST00000614931 MYLIPQ8WY64 445 aa8.83□□□□□ -1
PCDH9-205ENST00000614931 KCNN1Q92952 543 aa8.83□□□□□ -1
PCDH9-205ENST00000614931 DHTKD1Q96HY7 919 aaPredicted RBP8.83□□□□□ -1
PCDH9-205ENST00000614931 IFT74Q96LB3 600 aa8.83□□□□□ -1
PCDH9-205ENST00000614931 NLRP4Q96MN2 994 aa8.83□□□□□ -1
PCDH9-205ENST00000614931 FDXACB1Q9BRP7 624 aaPredicted RBP8.83□□□□□ -1
PCDH9-205ENST00000614931 NTPCRQ9BSD7 190 aaKnown RBP8.83□□□□□ -1
PCDH9-205ENST00000614931 OSBPL7Q9BZF2 842 aa8.83□□□□□ -1
PCDH9-205ENST00000614931 ADAMTS10Q9H324 1103 aa8.83□□□□□ -1
PCDH9-205ENST00000614931 C17orf75Q9HAS0 396 aa8.83□□□□□ -1
PCDH9-205ENST00000614931 IFT122Q9HBG6 1241 aa8.83□□□□□ -1
PCDH9-205ENST00000614931 DACH1Q9UI36 760 aa8.83□□□□□ -1
PCDH9-205ENST00000614931 RWDD2AQ9UIY3 292 aa8.83□□□□□ -1
PCDH9-205ENST00000614931 MSRAQ9UJ68 235 aa8.83□□□□□ -1
PCDH9-205ENST00000614931 AKT3Q9Y243 479 aa8.83□□□□□ -1
PCDH9-205ENST00000614931 PHLPP2Q6ZVD8 1323 aa8.82□□□□□ -1
PCDH9-205ENST00000614931 PSMA7O14818 248 aa8.82□□□□□ -1
PCDH9-205ENST00000614931 IKBKBO14920 756 aa8.82□□□□□ -1
PCDH9-205ENST00000614931 CLIC2O15247 247 aa8.82□□□□□ -1
PCDH9-205ENST00000614931 GPR32O75388 356 aa8.82□□□□□ -1
PCDH9-205ENST00000614931 CXCL10P02778 98 aa8.82□□□□□ -1
PCDH9-205ENST00000614931 ATP1A3P13637 1013 aa8.82□□□□□ -1
PCDH9-205ENST00000614931 ATP2A2P16615 1042 aaKnown RBP8.82□□□□□ -1
PCDH9-205ENST00000614931 FGFR4P22455 802 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms