RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 COL23A1Q86Y22 540 aaPredicted RBP14.59□□□□□ -0.07
CHD1-212ENST00000614616 SMAPO00193 183 aa14.59□□□□□ -0.07
CHD1-212ENST00000614616 MED7O43513 233 aa14.59□□□□□ -0.07
CHD1-212ENST00000614616 CDH2P19022 906 aaPredicted RBP14.59□□□□□ -0.07
CHD1-212ENST00000614616 CALB2P22676 271 aa14.59□□□□□ -0.07
CHD1-212ENST00000614616 RUNX1T1Q06455 604 aa14.59□□□□□ -0.07
CHD1-212ENST00000614616 DDR1Q08345 913 aa14.59□□□□□ -0.07
CHD1-212ENST00000614616 WASHC2DQ5SRD0 308 aa14.59□□□□□ -0.07
CHD1-212ENST00000614616 UNC5CLQ8IV45 518 aa14.59□□□□□ -0.07
CHD1-212ENST00000614616 SCUBE1Q8IWY4 988 aa14.59□□□□□ -0.07
CHD1-212ENST00000614616 SERPINB12Q96P63 405 aa14.59□□□□□ -0.07
CHD1-212ENST00000614616 ATXN10Q9UBB4 475 aa14.59□□□□□ -0.07
CHD1-212ENST00000614616 F8VZ95 297 aa14.58□□□□□ -0.07
CHD1-212ENST00000614616 IRS4O14654 1257 aaPredicted RBP14.58□□□□□ -0.07
CHD1-212ENST00000614616 C21orf59P57076 290 aa14.58□□□□□ -0.07
CHD1-212ENST00000614616 WDR64B1ANS9 1081 aa14.58□□□□□ -0.07
CHD1-212ENST00000614616 PHF2O75151 1096 aa14.58□□□□□ -0.07
CHD1-212ENST00000614616 LARGE1O95461 756 aa14.58□□□□□ -0.07
CHD1-212ENST00000614616 GSNP06396 782 aa14.58□□□□□ -0.07
CHD1-212ENST00000614616 TRIM49P0CI25 452 aa14.58□□□□□ -0.07
CHD1-212ENST00000614616 TRIM49CP0CI26 452 aa14.58□□□□□ -0.07
CHD1-212ENST00000614616 ATP2B4P23634 1241 aa14.58□□□□□ -0.07
CHD1-212ENST00000614616 IFNL3Q8IZI9 196 aa14.58□□□□□ -0.07
CHD1-212ENST00000614616 LIG4P49917 911 aa14.58□□□□□ -0.08
CHD1-212ENST00000614616 YWHAHQ04917 246 aaPredicted RBP14.58□□□□□ -0.08
CHD1-212ENST00000614616 PCNX4Q63HM2 1172 aa14.58□□□□□ -0.08
CHD1-212ENST00000614616 TSHZ1Q6ZSZ6 1077 aa14.58□□□□□ -0.08
CHD1-212ENST00000614616 DMAP1Q9NPF5 467 aaPredicted RBP14.58□□□□□ -0.08
CHD1-212ENST00000614616 SAP30BPQ9UHR5 308 aaKnown RBP14.58□□□□□ -0.08
CHD1-212ENST00000614616 PRCPP42785 496 aa14.58□□□□□ -0.08
CHD1-212ENST00000614616 HDDC2Q7Z4H3 204 aa14.58□□□□□ -0.08
CHD1-212ENST00000614616 SMCR8Q8TEV9 937 aaPredicted RBP14.58□□□□□ -0.08
CHD1-212ENST00000614616 CCDC127Q96BQ5 260 aa14.58□□□□□ -0.08
CHD1-212ENST00000614616 ARHGEF10LQ9HCE6 1279 aa14.58□□□□□ -0.08
CHD1-212ENST00000614616 DTNAQ9Y4J8 743 aa14.58□□□□□ -0.08
CHD1-212ENST00000614616 AASDHQ4L235 1098 aaPredicted RBP14.58□□□□□ -0.08
CHD1-212ENST00000614616 CLEC4FQ8N1N0 589 aa14.58□□□□□ -0.08
CHD1-212ENST00000614616 MCUQ8NE86 351 aa14.58□□□□□ -0.08
CHD1-212ENST00000614616 ATP6V1E2Q96A05 226 aa14.58□□□□□ -0.08
CHD1-212ENST00000614616 USP44Q9H0E7 712 aa14.58□□□□□ -0.08
CHD1-212ENST00000614616 PSMC3IPQ9P2W1 217 aaPredicted RBP14.58□□□□□ -0.08
CHD1-212ENST00000614616 GOLGA8HP0CJ92 632 aa14.58□□□□□ -0.08
CHD1-212ENST00000614616 PLOD1Q02809 727 aaPredicted RBP14.58□□□□□ -0.08
CHD1-212ENST00000614616 TRMT5Q32P41 509 aaKnown RBP14.58□□□□□ -0.08
CHD1-212ENST00000614616 EURLQ9NYK6 297 aa14.58□□□□□ -0.08
CHD1-212ENST00000614616 GGA2Q9UJY4 613 aa14.58□□□□□ -0.08
CHD1-212ENST00000614616 TUBA4AP68366 448 aa14.58□□□□□ -0.08
CHD1-212ENST00000614616 NECTIN1Q15223 517 aa14.58□□□□□ -0.08
CHD1-212ENST00000614616 MAP3K19Q56UN5 1328 aa14.58□□□□□ -0.08
CHD1-212ENST00000614616 KIAA1755Q5JYT7 1200 aa14.58□□□□□ -0.08
CHD1-212ENST00000614616 GTSE1Q9NYZ3 720 aa14.58□□□□□ -0.08
CHD1-212ENST00000614616 RWDD3Q9Y3V2 267 aa14.58□□□□□ -0.08
CHD1-212ENST00000614616 GMEB1Q9Y692 573 aa14.58□□□□□ -0.08
CHD1-212ENST00000614616 CCDC88AQ3V6T2 1871 aa14.57□□□□□ -0.08
CHD1-212ENST00000614616 FKBP6O75344 327 aa14.57□□□□□ -0.08
CHD1-212ENST00000614616 ITGA6P23229 1130 aa14.57□□□□□ -0.08
CHD1-212ENST00000614616 CAPRIN1Q14444 709 aaKnown RBP14.57□□□□□ -0.08
CHD1-212ENST00000614616 SETD3Q86TU7 594 aaPredicted RBP14.57□□□□□ -0.08
CHD1-212ENST00000614616 LPIN2Q92539 896 aa14.57□□□□□ -0.08
CHD1-212ENST00000614616 ANAPC7Q9UJX3 599 aa14.57□□□□□ -0.08
CHD1-212ENST00000614616 MRC2Q9UBG0 1479 aa14.57□□□□□ -0.08
CHD1-212ENST00000614616 PPP2R3CQ969Q6 453 aa14.57□□□□□ -0.08
CHD1-212ENST00000614616 RNPEPQ9H4A4 650 aa14.57□□□□□ -0.08
CHD1-212ENST00000614616 PKD2L1Q9P0L9 805 aa14.57□□□□□ -0.08
CHD1-212ENST00000614616 L1RE1Q9UN81 338 aa14.57□□□□□ -0.08
CHD1-212ENST00000614616 CEP170Q5SW79 1584 aa14.57□□□□□ -0.08
CHD1-212ENST00000614616 RFC5P40937 340 aa14.57□□□□□ -0.08
CHD1-212ENST00000614616 PPIDQ08752 370 aaKnown RBP14.57□□□□□ -0.08
CHD1-212ENST00000614616 ATP1A4Q13733 1029 aa14.57□□□□□ -0.08
CHD1-212ENST00000614616 RINLQ6ZS11 566 aa14.57□□□□□ -0.08
CHD1-212ENST00000614616 TRAPPC11Q7Z392 1133 aa14.57□□□□□ -0.08
CHD1-212ENST00000614616 NOA1Q8NC60 698 aaKnown RBP14.57□□□□□ -0.08
CHD1-212ENST00000614616 CALN1Q9BXU9 219 aa14.57□□□□□ -0.08
CHD1-212ENST00000614616 TIMMDC1Q9NPL8 285 aa14.57□□□□□ -0.08
CHD1-212ENST00000614616 DAPK2Q9UIK4 370 aa14.57□□□□□ -0.08
CHD1-212ENST00000614616 PLCH2O75038 1416 aa14.57□□□□□ -0.08
CHD1-212ENST00000614616 KIAA0556O60303 1618 aa14.57□□□□□ -0.08
CHD1-212ENST00000614616 FAM25AB3EWG3 89 aa14.57□□□□□ -0.08
CHD1-212ENST00000614616 FAM25CB3EWG5 89 aa14.57□□□□□ -0.08
CHD1-212ENST00000614616 FAM25GB3EWG6 89 aa14.57□□□□□ -0.08
CHD1-212ENST00000614616 ATP6V1E1P36543 226 aa14.57□□□□□ -0.08
CHD1-212ENST00000614616 ARMCX4Q5H9R4 360 aa14.57□□□□□ -0.08
CHD1-212ENST00000614616 CALML6Q8TD86 181 aa14.57□□□□□ -0.08
CHD1-212ENST00000614616 PSTPIP2Q9H939 334 aa14.57□□□□□ -0.08
CHD1-212ENST00000614616 ABLIM1O14639 778 aa14.57□□□□□ -0.08
CHD1-212ENST00000614616 ZBED1O96006 694 aa14.57□□□□□ -0.08
CHD1-212ENST00000614616 TRIM25Q14258 630 aaKnown RBP14.57□□□□□ -0.08
CHD1-212ENST00000614616 FAM102BQ5T8I3 360 aa14.57□□□□□ -0.08
CHD1-212ENST00000614616 IRGCQ6NXR0 463 aa14.57□□□□□ -0.08
CHD1-212ENST00000614616 RSRC2Q7L4I2 434 aaKnown RBP14.57□□□□□ -0.08
CHD1-212ENST00000614616 LRRC39Q96DD0 335 aa14.57□□□□□ -0.08
CHD1-212ENST00000614616 CAAP1Q9H8G2 361 aa14.57□□□□□ -0.08
CHD1-212ENST00000614616 HAO1Q9UJM8 370 aa14.57□□□□□ -0.08
CHD1-212ENST00000614616 ZNF184Q99676 751 aaPredicted RBP14.57□□□□□ -0.08
CHD1-212ENST00000614616 RBM12Q9NTZ6 932 aaKnown RBP14.57□□□□□ -0.08
CHD1-212ENST00000614616 CDV3Q9UKY7 258 aaKnown RBP14.57□□□□□ -0.08
CHD1-212ENST00000614616 PTPRTO14522 1441 aa14.57□□□□□ -0.08
CHD1-212ENST00000614616 B2RBV5 119 aa14.56□□□□□ -0.08
CHD1-212ENST00000614616 GOLGA8SH3BPF8 625 aa14.56□□□□□ -0.08
CHD1-212ENST00000614616 GOLGA8MH3BSY2 632 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 132.1 ms