RNA–Protein interactions for RNA: ENST00000611852.4

CCDC28A-202, Transcript of coiled-coil domain containing 28A, humanhuman

TSL 1 (best) BASIC

Gene CCDC28A, Length 1,505 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28A-202ENST00000611852 ACTN4O43707 911 aaKnown RBP18.23■□□□□ 0.51
CCDC28A-202ENST00000611852 PRKCBP05771 671 aa18.23■□□□□ 0.51
CCDC28A-202ENST00000611852 STAG3L1P0CL83 205 aa18.23■□□□□ 0.51
CCDC28A-202ENST00000611852 LIG1P18858 919 aa18.23■□□□□ 0.51
CCDC28A-202ENST00000611852 IBSPP21815 317 aaPredicted RBP18.23■□□□□ 0.51
CCDC28A-202ENST00000611852 NOTUMQ6P988 496 aa18.23■□□□□ 0.51
CCDC28A-202ENST00000611852 ECHDC2Q86YB7 292 aa18.23■□□□□ 0.51
CCDC28A-202ENST00000611852 TMEM161BQ8NDZ6 487 aa18.23■□□□□ 0.51
CCDC28A-202ENST00000611852 CPB2Q96IY4 423 aa18.23■□□□□ 0.51
CCDC28A-202ENST00000611852 LRRC27Q9C0I9 530 aa18.23■□□□□ 0.51
CCDC28A-202ENST00000611852 GOLPH3LQ9H4A5 285 aa18.23■□□□□ 0.51
CCDC28A-202ENST00000611852 ZHX3Q9H4I2 956 aa18.23■□□□□ 0.51
CCDC28A-202ENST00000611852 TMEM134Q9H6X4 195 aa18.23■□□□□ 0.51
CCDC28A-202ENST00000611852 ELAC1Q9H777 363 aaKnown RBP18.23■□□□□ 0.51
CCDC28A-202ENST00000611852 RC3H2Q9HBD1 1191 aaKnown RBP18.23■□□□□ 0.51
CCDC28A-202ENST00000611852 TMEM161AQ9NX61 479 aa18.23■□□□□ 0.51
CCDC28A-202ENST00000611852 SERTAD1Q9UHV2 236 aa18.23■□□□□ 0.51
CCDC28A-202ENST00000611852 PCDHB7Q9Y5E2 793 aa18.23■□□□□ 0.51
CCDC28A-202ENST00000611852 PHLPP2Q6ZVD8 1323 aa18.23■□□□□ 0.51
CCDC28A-202ENST00000611852 CNTNAP2Q9UHC6 1331 aa18.23■□□□□ 0.51
CCDC28A-202ENST00000611852 A0A1B0GUA9 196 aa18.23■□□□□ 0.51
CCDC28A-202ENST00000611852 DGKIO75912 1065 aa18.23■□□□□ 0.51
CCDC28A-202ENST00000611852 EDN1P05305 212 aa18.23■□□□□ 0.51
CCDC28A-202ENST00000611852 SLFN14P0C7P3 912 aa18.23■□□□□ 0.51
CCDC28A-202ENST00000611852 SYKP43405 635 aa18.23■□□□□ 0.51
CCDC28A-202ENST00000611852 NCKAP1LP55160 1127 aa18.23■□□□□ 0.51
CCDC28A-202ENST00000611852 AMPD3Q01432 767 aa18.23■□□□□ 0.51
CCDC28A-202ENST00000611852 PRPF4BQ13523 1007 aaKnown RBP18.23■□□□□ 0.51
CCDC28A-202ENST00000611852 UBXN11Q5T124 520 aa18.23■□□□□ 0.51
CCDC28A-202ENST00000611852 TAS1R3Q7RTX0 852 aa18.23■□□□□ 0.51
CCDC28A-202ENST00000611852 TIFAQ96CG3 184 aa18.23■□□□□ 0.51
CCDC28A-202ENST00000611852 FIZ1Q96SL8 496 aa18.23■□□□□ 0.51
CCDC28A-202ENST00000611852 YME1L1Q96TA2 773 aa18.23■□□□□ 0.51
CCDC28A-202ENST00000611852 TRIM9Q9C026 710 aa18.23■□□□□ 0.51
CCDC28A-202ENST00000611852 NKX2-4Q9H2Z4 354 aa18.23■□□□□ 0.51
CCDC28A-202ENST00000611852 FAM105AQ9NUU6 356 aa18.23■□□□□ 0.51
CCDC28A-202ENST00000611852 RNF216Q9NWF9 866 aaPredicted RBP18.23■□□□□ 0.51
CCDC28A-202ENST00000611852 LRFN2Q9ULH4 789 aa18.23■□□□□ 0.51
CCDC28A-202ENST00000611852 USP20Q9Y2K6 914 aa18.23■□□□□ 0.51
CCDC28A-202ENST00000611852 FRMD3A2A2Y4 597 aa18.22■□□□□ 0.51
CCDC28A-202ENST00000611852 LCHNA4D1U4 455 aa18.22■□□□□ 0.51
CCDC28A-202ENST00000611852 GOLGA6L4A6NEF3 574 aa18.22■□□□□ 0.51
CCDC28A-202ENST00000611852 TRAK2O60296 914 aa18.22■□□□□ 0.51
CCDC28A-202ENST00000611852 ZNF623O75123 536 aa18.22■□□□□ 0.51
CCDC28A-202ENST00000611852 CA3P07451 260 aa18.22■□□□□ 0.51
CCDC28A-202ENST00000611852 ATF7P17544 494 aaPredicted RBP18.22■□□□□ 0.51
CCDC28A-202ENST00000611852 RAB27AP51159 221 aa18.22■□□□□ 0.51
CCDC28A-202ENST00000611852 LONRF3Q496Y0 759 aa18.22■□□□□ 0.51
CCDC28A-202ENST00000611852 GPR153Q6NV75 609 aa18.22■□□□□ 0.51
CCDC28A-202ENST00000611852 ZNF598Q86UK7 904 aaKnown RBP18.22■□□□□ 0.51
CCDC28A-202ENST00000611852 CEP57L1Q8IYX8 460 aa18.22■□□□□ 0.51
CCDC28A-202ENST00000611852 KCNN1Q92952 543 aa18.22■□□□□ 0.51
CCDC28A-202ENST00000611852 ZNF689Q96CS4 500 aaPredicted RBP18.22■□□□□ 0.51
CCDC28A-202ENST00000611852 CCDC51Q96ER9 411 aa18.22■□□□□ 0.51
CCDC28A-202ENST00000611852 USP25Q9UHP3 1055 aa18.22■□□□□ 0.51
CCDC28A-202ENST00000611852 SZT2Q5T011 3432 aa18.22■□□□□ 0.51
CCDC28A-202ENST00000611852 COL4A6Q14031 1691 aa18.21■□□□□ 0.51
CCDC28A-202ENST00000611852 H0YCG3 227 aa18.21■□□□□ 0.51
CCDC28A-202ENST00000611852 EOMESO95936 686 aa18.21■□□□□ 0.51
CCDC28A-202ENST00000611852 MAPTP10636 758 aaKnown RBP18.21■□□□□ 0.51
CCDC28A-202ENST00000611852 IDEP14735 1019 aa18.21■□□□□ 0.51
CCDC28A-202ENST00000611852 CSPP1Q1MSJ5 1256 aa18.21■□□□□ 0.51
CCDC28A-202ENST00000611852 CNNM4Q6P4Q7 775 aa18.21■□□□□ 0.51
CCDC28A-202ENST00000611852 HAUS6Q7Z4H7 955 aa18.21■□□□□ 0.51
CCDC28A-202ENST00000611852 CDR2LQ86X02 465 aaPredicted RBP18.21■□□□□ 0.51
CCDC28A-202ENST00000611852 SFR1Q86XK3 245 aa18.21■□□□□ 0.51
CCDC28A-202ENST00000611852 FAM178BQ8IXR5 827 aa18.21■□□□□ 0.51
CCDC28A-202ENST00000611852 SP7Q8TDD2 431 aaPredicted RBP18.21■□□□□ 0.51
CCDC28A-202ENST00000611852 C7orf25Q9BPX7 421 aa18.21■□□□□ 0.51
CCDC28A-202ENST00000611852 EIF2AQ9BY44 585 aaKnown RBP18.21■□□□□ 0.51
CCDC28A-202ENST00000611852 PCDHB2Q9Y5E7 798 aa18.21■□□□□ 0.51
CCDC28A-202ENST00000611852 ARHGEF15O94989 841 aa18.2■□□□□ 0.5
CCDC28A-202ENST00000611852 SKIP12755 728 aa18.2■□□□□ 0.5
CCDC28A-202ENST00000611852 GAP43P17677 238 aa18.2■□□□□ 0.5
CCDC28A-202ENST00000611852 AFMP43652 599 aa18.2■□□□□ 0.5
CCDC28A-202ENST00000611852 NT5DC1Q5TFE4 455 aa18.2■□□□□ 0.5
CCDC28A-202ENST00000611852 SLC27A1Q6PCB7 646 aa18.2■□□□□ 0.5
CCDC28A-202ENST00000611852 GRAMD1CQ8IYS0 662 aa18.2■□□□□ 0.5
CCDC28A-202ENST00000611852 TMEM87AQ8NBN3 555 aa18.2■□□□□ 0.5
CCDC28A-202ENST00000611852 RNF169Q8NCN4 708 aa18.2■□□□□ 0.5
CCDC28A-202ENST00000611852 PDZD7Q9H5P4 517 aa18.2■□□□□ 0.5
CCDC28A-202ENST00000611852 SLC28A3Q9HAS3 691 aa18.2■□□□□ 0.5
CCDC28A-202ENST00000611852 PANK4Q9NVE7 773 aa18.2■□□□□ 0.5
CCDC28A-202ENST00000611852 SEL1LQ9UBV2 794 aa18.2■□□□□ 0.5
CCDC28A-202ENST00000611852 TMEM265A0A087WTH1 108 aa18.19■□□□□ 0.5
CCDC28A-202ENST00000611852 K7ENM7 598 aa18.19■□□□□ 0.5
CCDC28A-202ENST00000611852 ZNF202O95125 648 aa18.19■□□□□ 0.5
CCDC28A-202ENST00000611852 FGFR1P11362 822 aa18.19■□□□□ 0.5
CCDC28A-202ENST00000611852 SCP2P22307 547 aa18.19■□□□□ 0.5
CCDC28A-202ENST00000611852 CASP1P29466 404 aa18.19■□□□□ 0.5
CCDC28A-202ENST00000611852 NMT1P30419 496 aaKnown RBP18.19■□□□□ 0.5
CCDC28A-202ENST00000611852 GATMP50440 423 aa18.19■□□□□ 0.5
CCDC28A-202ENST00000611852 MRPL10Q7Z7H8 261 aaKnown RBP18.19■□□□□ 0.5
CCDC28A-202ENST00000611852 PAGE5Q96GU1 130 aa18.19■□□□□ 0.5
CCDC28A-202ENST00000611852 BLZF1Q9H2G9 400 aa18.19■□□□□ 0.5
CCDC28A-202ENST00000611852 TTYH1Q9H313 450 aaPredicted RBP18.19■□□□□ 0.5
CCDC28A-202ENST00000611852 RNF19AQ9NV58 838 aa18.19■□□□□ 0.5
CCDC28A-202ENST00000611852 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.18■□□□□ 0.5
CCDC28A-202ENST00000611852 N4BP3O15049 544 aa18.18■□□□□ 0.5
CCDC28A-202ENST00000611852 ASIC1P78348 528 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms