RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 OLFML3Q9NRN5 406 aa9.32□□□□□ -0.92
LIG4-204ENST00000611712 KCNH7Q9NS40 1196 aa9.32□□□□□ -0.92
LIG4-204ENST00000611712 KLHL14Q9P2G3 628 aa9.32□□□□□ -0.92
LIG4-204ENST00000611712 SCAF8Q9UPN6 1271 aaKnown RBP9.32□□□□□ -0.92
LIG4-204ENST00000611712 STK38LQ9Y2H1 464 aa9.32□□□□□ -0.92
LIG4-204ENST00000611712 PCDHAC2Q9Y5I4 1007 aa9.32□□□□□ -0.92
LIG4-204ENST00000611712 LRP6O75581 1613 aa9.32□□□□□ -0.92
LIG4-204ENST00000611712 DDX3XO00571 662 aaKnown RBP eCLIP9.32□□□□□ -0.92
LIG4-204ENST00000611712 TLR2O60603 784 aa9.32□□□□□ -0.92
LIG4-204ENST00000611712 SNHG28P0DPA3 235 aa9.32□□□□□ -0.92
LIG4-204ENST00000611712 COMTP21964 271 aa9.32□□□□□ -0.92
LIG4-204ENST00000611712 CCND2P30279 289 aa9.32□□□□□ -0.92
LIG4-204ENST00000611712 CRY2Q49AN0 593 aa9.32□□□□□ -0.92
LIG4-204ENST00000611712 JAMLQ86YT9 394 aa9.32□□□□□ -0.92
LIG4-204ENST00000611712 PASD1Q8IV76 773 aa9.32□□□□□ -0.92
LIG4-204ENST00000611712 CCDC89Q8N998 374 aa9.32□□□□□ -0.92
LIG4-204ENST00000611712 FBXL13Q8NEE6 735 aa9.32□□□□□ -0.92
LIG4-204ENST00000611712 FBF1Q8TES7 1133 aa9.32□□□□□ -0.92
LIG4-204ENST00000611712 RIT2Q99578 217 aa9.32□□□□□ -0.92
LIG4-204ENST00000611712 ERP44Q9BS26 406 aa9.32□□□□□ -0.92
LIG4-204ENST00000611712 CARD9Q9H257 536 aa9.32□□□□□ -0.92
LIG4-204ENST00000611712 MRPL47Q9HD33 250 aaKnown RBP9.32□□□□□ -0.92
LIG4-204ENST00000611712 GABBR1Q9UBS5 961 aa9.32□□□□□ -0.92
LIG4-204ENST00000611712 SALL4Q9UJQ4 1053 aa9.32□□□□□ -0.92
LIG4-204ENST00000611712 PKD1L3Q7Z443 1732 aa9.32□□□□□ -0.92
LIG4-204ENST00000611712 SUN1O94901 812 aa9.32□□□□□ -0.92
LIG4-204ENST00000611712 PSAPP07602 524 aa9.32□□□□□ -0.92
LIG4-204ENST00000611712 FGFR4P22455 802 aa9.32□□□□□ -0.92
LIG4-204ENST00000611712 ERVK-9P63128 1117 aa9.32□□□□□ -0.92
LIG4-204ENST00000611712 FAM133BQ5BKY9 247 aaKnown RBP9.32□□□□□ -0.92
LIG4-204ENST00000611712 RTKN2Q8IZC4 609 aa9.32□□□□□ -0.92
LIG4-204ENST00000611712 CCDC63Q8NA47 563 aa9.32□□□□□ -0.92
LIG4-204ENST00000611712 GMCL1P1Q8NEA9 526 aa9.32□□□□□ -0.92
LIG4-204ENST00000611712 PPP1R14CQ8TAE6 165 aa9.32□□□□□ -0.92
LIG4-204ENST00000611712 LRRC15Q8TF66 581 aa9.32□□□□□ -0.92
LIG4-204ENST00000611712 TCP11Q8WWU5 503 aa9.32□□□□□ -0.92
LIG4-204ENST00000611712 GANQ9H2C0 597 aa9.32□□□□□ -0.92
LIG4-204ENST00000611712 KCTD10Q9H3F6 313 aa9.32□□□□□ -0.92
LIG4-204ENST00000611712 ACTR5Q9H9F9 607 aaPredicted RBP9.32□□□□□ -0.92
LIG4-204ENST00000611712 ZNF70Q9UC06 446 aaPredicted RBP9.32□□□□□ -0.92
LIG4-204ENST00000611712 NUP188Q5SRE5 1749 aa9.32□□□□□ -0.92
LIG4-204ENST00000611712 BAZ2AQ9UIF9 1905 aaKnown RBP9.31□□□□□ -0.92
LIG4-204ENST00000611712 K7ERI5 159 aa9.31□□□□□ -0.92
LIG4-204ENST00000611712 SLITRK3O94933 977 aa9.31□□□□□ -0.92
LIG4-204ENST00000611712 PLS3P13797 630 aa9.31□□□□□ -0.92
LIG4-204ENST00000611712 NPEPPSP55786 919 aa9.31□□□□□ -0.92
LIG4-204ENST00000611712 RASA3Q14644 834 aa9.31□□□□□ -0.92
LIG4-204ENST00000611712 PTGISQ16647 500 aa9.31□□□□□ -0.92
LIG4-204ENST00000611712 SHROOM1Q2M3G4 852 aaPredicted RBP9.31□□□□□ -0.92
LIG4-204ENST00000611712 CCDC38Q502W7 563 aa9.31□□□□□ -0.92
LIG4-204ENST00000611712 ICE2Q659A1 982 aa9.31□□□□□ -0.92
LIG4-204ENST00000611712 HGSNATQ68CP4 663 aa9.31□□□□□ -0.92
LIG4-204ENST00000611712 PLA2G4FQ68DD2 849 aa9.31□□□□□ -0.92
LIG4-204ENST00000611712 KDM7AQ6ZMT4 941 aa9.31□□□□□ -0.92
LIG4-204ENST00000611712 CDAN1Q8IWY9 1227 aa9.31□□□□□ -0.92
LIG4-204ENST00000611712 PURBQ96QR8 312 aaKnown RBP9.31□□□□□ -0.92
LIG4-204ENST00000611712 C11orf70Q9BRQ4 267 aa9.31□□□□□ -0.92
LIG4-204ENST00000611712 ADAM22Q9P0K1 906 aa9.31□□□□□ -0.92
LIG4-204ENST00000611712 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.31□□□□□ -0.92
LIG4-204ENST00000611712 SPATA31A6Q5VVP1 1343 aa9.31□□□□□ -0.92
LIG4-204ENST00000611712 CASZ1Q86V15 1759 aa9.31□□□□□ -0.92
LIG4-204ENST00000611712 GTPBP10A4D1E9 387 aaKnown RBP9.31□□□□□ -0.92
LIG4-204ENST00000611712 KCNJ1P48048 391 aa9.31□□□□□ -0.92
LIG4-204ENST00000611712 SPP2Q13103 211 aa9.31□□□□□ -0.92
LIG4-204ENST00000611712 SNCBQ16143 134 aa9.31□□□□□ -0.92
LIG4-204ENST00000611712 SNRNP35Q16560 246 aaKnown RBP9.31□□□□□ -0.92
LIG4-204ENST00000611712 ARSHQ5FYA8 562 aa9.31□□□□□ -0.92
LIG4-204ENST00000611712 FBXW10Q5XX13 1052 aa9.31□□□□□ -0.92
LIG4-204ENST00000611712 LMBRD2Q68DH5 695 aaPredicted RBP9.31□□□□□ -0.92
LIG4-204ENST00000611712 SWSAP1Q6NVH7 229 aa9.31□□□□□ -0.92
LIG4-204ENST00000611712 HIBCHQ6NVY1 386 aaPredicted RBP9.31□□□□□ -0.92
LIG4-204ENST00000611712 SEPT14Q6ZU15 432 aa9.31□□□□□ -0.92
LIG4-204ENST00000611712 COL23A1Q86Y22 540 aaPredicted RBP9.31□□□□□ -0.92
LIG4-204ENST00000611712 GDAP1Q8TB36 358 aa9.31□□□□□ -0.92
LIG4-204ENST00000611712 FAM151AQ8WW52 585 aa9.31□□□□□ -0.92
LIG4-204ENST00000611712 FAM81BQ96LP2 452 aa9.31□□□□□ -0.92
LIG4-204ENST00000611712 CBWD1Q9BRT8 395 aa9.31□□□□□ -0.92
LIG4-204ENST00000611712 TMEM39BQ9GZU3 492 aa9.31□□□□□ -0.92
LIG4-204ENST00000611712 MLXIPLQ9NP71 852 aa9.31□□□□□ -0.92
LIG4-204ENST00000611712 RNF146Q9NTX7 359 aa9.31□□□□□ -0.92
LIG4-204ENST00000611712 CD58P19256 250 aa9.31□□□□□ -0.92
LIG4-204ENST00000611712 CCDC6Q16204 474 aa9.31□□□□□ -0.92
LIG4-204ENST00000611712 OTOP1Q7RTM1 612 aa9.31□□□□□ -0.92
LIG4-204ENST00000611712 MCPH1Q8NEM0 835 aa9.31□□□□□ -0.92
LIG4-204ENST00000611712 CHMP6Q96FZ7 201 aa9.31□□□□□ -0.92
LIG4-204ENST00000611712 CDHR1Q96JP9 859 aa9.31□□□□□ -0.92
LIG4-204ENST00000611712 GDF3Q9NR23 364 aa9.31□□□□□ -0.92
LIG4-204ENST00000611712 UBE4BO95155 1302 aa9.31□□□□□ -0.92
LIG4-204ENST00000611712 LAMA4Q16363 1823 aa9.31□□□□□ -0.92
LIG4-204ENST00000611712 PHF20L1A8MW92 1017 aa9.31□□□□□ -0.92
LIG4-204ENST00000611712 PHF2O75151 1096 aa9.31□□□□□ -0.92
LIG4-204ENST00000611712 TMEM191BP0C7N4 346 aa9.31□□□□□ -0.92
LIG4-204ENST00000611712 SFNP31947 248 aa9.31□□□□□ -0.92
LIG4-204ENST00000611712 MAP2K2P36507 400 aa9.31□□□□□ -0.92
LIG4-204ENST00000611712 BYSLQ13895 437 aaKnown RBP9.31□□□□□ -0.92
LIG4-204ENST00000611712 NUGGCQ68CJ6 796 aa9.31□□□□□ -0.92
LIG4-204ENST00000611712 MIS18BP1Q6P0N0 1132 aa9.31□□□□□ -0.92
LIG4-204ENST00000611712 RSAD2Q8WXG1 361 aa9.31□□□□□ -0.92
LIG4-204ENST00000611712 MKL1Q969V6 931 aa9.31□□□□□ -0.92
LIG4-204ENST00000611712 FAM198AQ9UFP1 575 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms